RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 FECHP22830 423 aa7.43□□□□□ -1.22
UBR1-211ENST00000569971 SMCPP49901 116 aaPredicted RBP7.43□□□□□ -1.22
UBR1-211ENST00000569971 BRICD5Q6PL45 260 aa7.43□□□□□ -1.22
UBR1-211ENST00000569971 ERICH6Q7L0X2 663 aa7.43□□□□□ -1.22
UBR1-211ENST00000569971 Q3C1V9 767 aa7.42□□□□□ -1.22
UBR1-211ENST00000569971 FAM160A2Q8N612 972 aaPredicted RBP7.42□□□□□ -1.22
UBR1-211ENST00000569971 SLC27A5Q9Y2P5 690 aa7.42□□□□□ -1.22
UBR1-211ENST00000569971 GPIHBP1Q8IV16 184 aa7.41□□□□□ -1.22
UBR1-211ENST00000569971 KRI1Q8N9T8 703 aaKnown RBP7.41□□□□□ -1.22
UBR1-211ENST00000569971 ZBTB24O43167 697 aaPredicted RBP7.4□□□□□ -1.22
UBR1-211ENST00000569971 C14orf37Q86TY3 774 aa7.4□□□□□ -1.22
UBR1-211ENST00000569971 CYP4X1Q8N118 509 aa7.4□□□□□ -1.22
UBR1-211ENST00000569971 AK7Q96M32 723 aa7.4□□□□□ -1.22
UBR1-211ENST00000569971 MMP16P51512 607 aa7.39□□□□□ -1.23
UBR1-211ENST00000569971 FOXC1Q12948 553 aa7.39□□□□□ -1.23
UBR1-211ENST00000569971 WNT7AO00755 349 aa7.38□□□□□ -1.23
UBR1-211ENST00000569971 ST8SIA5O15466 376 aa7.38□□□□□ -1.23
UBR1-211ENST00000569971 USP46P62068 366 aa7.38□□□□□ -1.23
UBR1-211ENST00000569971 PHOX2BQ99453 314 aa7.38□□□□□ -1.23
UBR1-211ENST00000569971 POTECB2RU33 542 aa7.37□□□□□ -1.23
UBR1-211ENST00000569971 AXIN1O15169 862 aa7.37□□□□□ -1.23
UBR1-211ENST00000569971 CD46P15529 392 aa7.37□□□□□ -1.23
UBR1-211ENST00000569971 MAP2K5Q13163 448 aa7.37□□□□□ -1.23
UBR1-211ENST00000569971 LCE2AQ5TA79 106 aaPredicted RBP7.37□□□□□ -1.23
UBR1-211ENST00000569971 TREML4Q6UXN2 200 aa7.37□□□□□ -1.23
UBR1-211ENST00000569971 REPIN1Q9BWE0 567 aaKnown RBP7.37□□□□□ -1.23
UBR1-211ENST00000569971 PRDM9Q9NQV7 894 aa7.36□□□□□ -1.23
UBR1-211ENST00000569971 TRIM32Q13049 653 aa7.35□□□□□ -1.23
UBR1-211ENST00000569971 RNF19BQ6ZMZ0 732 aa7.35□□□□□ -1.23
UBR1-211ENST00000569971 GPBP1L1Q9HC44 474 aaPredicted RBP7.35□□□□□ -1.23
UBR1-211ENST00000569971 TRIM66O15016 1216 aa7.34□□□□□ -1.23
UBR1-211ENST00000569971 DXOO77932 396 aaKnown RBP7.34□□□□□ -1.23
UBR1-211ENST00000569971 SNIP1Q8TAD8 396 aaKnown RBP7.34□□□□□ -1.23
UBR1-211ENST00000569971 USB1Q9BQ65 265 aaKnown RBP7.34□□□□□ -1.23
UBR1-211ENST00000569971 KDM4AO75164 1064 aa7.33□□□□□ -1.24
UBR1-211ENST00000569971 NLRP7Q8WX94 980 aa7.33□□□□□ -1.24
UBR1-211ENST00000569971 TTC24A2A3L6 582 aaPredicted RBP7.32□□□□□ -1.24
UBR1-211ENST00000569971 WNT7BP56706 349 aa7.32□□□□□ -1.24
UBR1-211ENST00000569971 IL27Q8NEV9 243 aa7.32□□□□□ -1.24
UBR1-211ENST00000569971 MINK1Q8N4C8 1332 aaPredicted RBP7.31□□□□□ -1.24
UBR1-211ENST00000569971 C11orf95C9JLR9 678 aaPredicted RBP7.3□□□□□ -1.24
UBR1-211ENST00000569971 IRF6O14896 467 aa7.3□□□□□ -1.24
UBR1-211ENST00000569971 SMPD1P17405 629 aa7.3□□□□□ -1.24
UBR1-211ENST00000569971 PDE4DQ08499 809 aa7.3□□□□□ -1.24
UBR1-211ENST00000569971 KDM4CQ9H3R0 1056 aa7.3□□□□□ -1.24
UBR1-211ENST00000569971 SENP2Q9HC62 589 aa7.3□□□□□ -1.24
UBR1-211ENST00000569971 GMPR2Q9P2T1 348 aaKnown RBP7.3□□□□□ -1.24
UBR1-211ENST00000569971 MRGPRX2Q96LB1 330 aa7.29□□□□□ -1.24
UBR1-211ENST00000569971 HOXA2O43364 376 aa7.28□□□□□ -1.24
UBR1-211ENST00000569971 WIPF1O43516 503 aa7.28□□□□□ -1.24
UBR1-211ENST00000569971 WFS1O76024 890 aa7.28□□□□□ -1.24
UBR1-211ENST00000569971 KIFC2Q96AC6 838 aa7.28□□□□□ -1.24
UBR1-211ENST00000569971 DACH1Q9UI36 760 aa7.28□□□□□ -1.24
UBR1-211ENST00000569971 CLCN1P35523 988 aa7.27□□□□□ -1.25
UBR1-211ENST00000569971 TRIM47Q96LD4 638 aa7.27□□□□□ -1.25
UBR1-211ENST00000569971 ATP13A2Q9NQ11 1180 aa7.27□□□□□ -1.25
UBR1-211ENST00000569971 JUNDP17535 347 aa7.26□□□□□ -1.25
UBR1-211ENST00000569971 NFX1Q12986 1120 aaKnown RBP7.26□□□□□ -1.25
UBR1-211ENST00000569971 GPCPD1Q9NPB8 672 aa7.26□□□□□ -1.25
UBR1-211ENST00000569971 MDM2Q00987 491 aaPredicted RBP7.24□□□□□ -1.25
UBR1-211ENST00000569971 INSM1Q01101 510 aaPredicted RBP7.24□□□□□ -1.25
UBR1-211ENST00000569971 RETREG3Q86VR2 466 aa7.24□□□□□ -1.25
UBR1-211ENST00000569971 FAM217BQ9NTX9 383 aaPredicted RBP7.24□□□□□ -1.25
UBR1-211ENST00000569971 STK17AQ9UEE5 414 aa7.24□□□□□ -1.25
UBR1-211ENST00000569971 SUPT5HO00267 1087 aaKnown RBP7.23□□□□□ -1.25
UBR1-211ENST00000569971 RC3H1Q5TC82 1133 aaKnown RBP7.23□□□□□ -1.25
UBR1-211ENST00000569971 CCDC102AQ96A19 550 aa7.23□□□□□ -1.25
UBR1-211ENST00000569971 FAM117AQ9C073 453 aa7.23□□□□□ -1.25
UBR1-211ENST00000569971 J3QL48 77 aa7.22□□□□□ -1.25
UBR1-211ENST00000569971 ARXQ96QS3 562 aa7.22□□□□□ -1.25
UBR1-211ENST00000569971 SKOR1P84550 965 aa7.21□□□□□ -1.26
UBR1-211ENST00000569971 CCDC24Q8N4L8 307 aa7.21□□□□□ -1.26
UBR1-211ENST00000569971 TERTO14746 1132 aaKnown RBP7.2□□□□□ -1.26
UBR1-211ENST00000569971 NUTM1Q86Y26 1132 aa7.2□□□□□ -1.26
UBR1-211ENST00000569971 NPAS3Q8IXF0 933 aa7.2□□□□□ -1.26
UBR1-211ENST00000569971 HPS1Q92902 700 aa7.2□□□□□ -1.26
UBR1-211ENST00000569971 NUDT12Q9BQG2 462 aa7.2□□□□□ -1.26
UBR1-211ENST00000569971 HLA-CQ95604 372 aa7.19□□□□□ -1.26
UBR1-211ENST00000569971 PLEKHG3A1L390 1219 aa7.18□□□□□ -1.26
UBR1-211ENST00000569971 CCNYL3P0C7X3 344 aa7.18□□□□□ -1.26
UBR1-211ENST00000569971 SNRPBP14678 240 aaKnown RBP7.18□□□□□ -1.26
UBR1-211ENST00000569971 AMHR2Q16671 573 aa7.18□□□□□ -1.26
UBR1-211ENST00000569971 PTPRNQ16849 979 aa7.18□□□□□ -1.26
UBR1-211ENST00000569971 DESI1Q6ICB0 168 aa7.18□□□□□ -1.26
UBR1-211ENST00000569971 PARP9Q8IXQ6 854 aa7.18□□□□□ -1.26
UBR1-211ENST00000569971 SPDYE5A6NIY4 337 aa7.17□□□□□ -1.26
UBR1-211ENST00000569971 SIAH2O43255 324 aa7.17□□□□□ -1.26
UBR1-211ENST00000569971 MPNDQ8N594 471 aa7.17□□□□□ -1.26
UBR1-211ENST00000569971 EHBP1Q8NDI1 1231 aa7.17□□□□□ -1.26
UBR1-211ENST00000569971 ALDH1A1P00352 501 aa7.16□□□□□ -1.26
UBR1-211ENST00000569971 FDX1P10109 184 aa7.16□□□□□ -1.26
UBR1-211ENST00000569971 MS4A1P11836 297 aa7.16□□□□□ -1.26
UBR1-211ENST00000569971 GJA5P36382 358 aa7.16□□□□□ -1.26
UBR1-211ENST00000569971 DDRGK1Q96HY6 314 aa7.16□□□□□ -1.26
UBR1-211ENST00000569971 GUCA2AQ02747 115 aa7.15□□□□□ -1.26
UBR1-211ENST00000569971 SLC16A10Q8TF71 515 aa7.15□□□□□ -1.26
UBR1-211ENST00000569971 TTLL12Q14166 644 aaPredicted RBP7.14□□□□□ -1.27
UBR1-211ENST00000569971 EVA1BQ9NVM1 165 aa7.14□□□□□ -1.27
UBR1-211ENST00000569971 WASF2Q9Y6W5 498 aa7.14□□□□□ -1.27
UBR1-211ENST00000569971 FAM181BA6NEQ2 426 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms