RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 C14orf93Q9H972 538 aaKnown RBP33.15■■■□□ 2.9
RBFOX1-219ENST00000569895 IFT172Q9UG01 1749 aa33.15■■■□□ 2.9
RBFOX1-219ENST00000569895 WAPLQ7Z5K2 1190 aa33.14■■■□□ 2.9
RBFOX1-219ENST00000569895 ESCO1Q5FWF5 840 aa33.11■■■□□ 2.89
RBFOX1-219ENST00000569895 SIRT1Q96EB6 747 aa33.11■■■□□ 2.89
RBFOX1-219ENST00000569895 SOS2Q07890 1332 aaPredicted RBP33.1■■■□□ 2.89
RBFOX1-219ENST00000569895 PNPLA6Q8IY17 1366 aa33.09■■■□□ 2.89
RBFOX1-219ENST00000569895 YTHDC2Q9H6S0 1430 aaKnown RBP33.09■■■□□ 2.89
RBFOX1-219ENST00000569895 DHX57Q6P158 1386 aaKnown RBP33.09■■■□□ 2.89
RBFOX1-219ENST00000569895 MYOM2P54296 1465 aa33.07■■■□□ 2.88
RBFOX1-219ENST00000569895 CFAP70Q5T0N1 1121 aa33.07■■■□□ 2.88
RBFOX1-219ENST00000569895 CDC42BPGQ6DT37 1551 aa33.06■■■□□ 2.88
RBFOX1-219ENST00000569895 NRXN1Q9ULB1 1477 aa33.05■■■□□ 2.88
RBFOX1-219ENST00000569895 NPHP3Q7Z494 1330 aa33.05■■■□□ 2.88
RBFOX1-219ENST00000569895 LAMC1P11047 1609 aa33.02■■■□□ 2.88
RBFOX1-219ENST00000569895 PLEKHH1Q9ULM0 1364 aa33.02■■■□□ 2.88
RBFOX1-219ENST00000569895 STAC3Q96MF2 364 aa33.02■■■□□ 2.88
RBFOX1-219ENST00000569895 AFF2P51816 1311 aa33.02■■■□□ 2.88
RBFOX1-219ENST00000569895 RXRBP28702 533 aa33.01■■■□□ 2.87
RBFOX1-219ENST00000569895 C8orf37Q96NL8 207 aa33.01■■■□□ 2.87
RBFOX1-219ENST00000569895 KNDC1Q76NI1 1749 aa33■■■□□ 2.87
RBFOX1-219ENST00000569895 NUTM2FA1L443 756 aa33■■■□□ 2.87
RBFOX1-219ENST00000569895 FOXO3O43524 673 aa32.99■■■□□ 2.87
RBFOX1-219ENST00000569895 DCAF11Q8TEB1 546 aa32.97■■■□□ 2.87
RBFOX1-219ENST00000569895 KDM2AQ9Y2K7 1162 aa32.97■■■□□ 2.87
RBFOX1-219ENST00000569895 ADAMTS2O95450 1211 aa32.96■■■□□ 2.87
RBFOX1-219ENST00000569895 NGLY1Q96IV0 654 aa32.95■■■□□ 2.87
RBFOX1-219ENST00000569895 POGKQ9P215 609 aa32.94■■■□□ 2.86
RBFOX1-219ENST00000569895 PRAM1Q96QH2 718 aa32.93■■■□□ 2.86
RBFOX1-219ENST00000569895 QTRT2Q9H974 415 aaKnown RBP32.91■■■□□ 2.86
RBFOX1-219ENST00000569895 XPCQ01831 940 aaPredicted RBP32.89■■■□□ 2.86
RBFOX1-219ENST00000569895 SAFB2Q14151 953 aaKnown RBP eCLIP32.89■■■□□ 2.86
RBFOX1-219ENST00000569895 PXDNQ92626 1479 aa32.86■■■□□ 2.85
RBFOX1-219ENST00000569895 RBM6P78332 1123 aaKnown RBP32.85■■■□□ 2.85
RBFOX1-219ENST00000569895 TRAK1Q9UPV9 953 aa32.85■■■□□ 2.85
RBFOX1-219ENST00000569895 DLC1Q96QB1 1528 aa32.84■■■□□ 2.85
RBFOX1-219ENST00000569895 FMN2Q9NZ56 1722 aa32.83■■■□□ 2.85
RBFOX1-219ENST00000569895 CDK12Q9NYV4 1490 aaPredicted RBP32.83■■■□□ 2.85
RBFOX1-219ENST00000569895 PHF8Q9UPP1 1060 aa32.83■■■□□ 2.85
RBFOX1-219ENST00000569895 PSME1Q06323 249 aa32.82■■■□□ 2.84
RBFOX1-219ENST00000569895 KRT28Q7Z3Y7 464 aa32.82■■■□□ 2.84
RBFOX1-219ENST00000569895 USP21Q9UK80 565 aa32.82■■■□□ 2.84
RBFOX1-219ENST00000569895 FNBP4Q8N3X1 1017 aaPredicted RBP32.8■■■□□ 2.84
RBFOX1-219ENST00000569895 COL22A1Q8NFW1 1626 aaPredicted RBP32.8■■■□□ 2.84
RBFOX1-219ENST00000569895 ADGRB1O14514 1584 aa32.79■■■□□ 2.84
RBFOX1-219ENST00000569895 SPATA31A3Q5VYP0 1347 aa32.78■■■□□ 2.84
RBFOX1-219ENST00000569895 KIF1AQ12756 1690 aa32.78■■■□□ 2.84
RBFOX1-219ENST00000569895 TRPC5Q9UL62 973 aaPredicted RBP32.77■■■□□ 2.84
RBFOX1-219ENST00000569895 ANKARQ7Z5J8 1434 aa32.73■■■□□ 2.83
RBFOX1-219ENST00000569895 EIF3AQ14152 1382 aaKnown RBP32.72■■■□□ 2.83
RBFOX1-219ENST00000569895 UPF1Q92900 1129 aaKnown RBP eCLIP32.72■■■□□ 2.83
RBFOX1-219ENST00000569895 HIRIP3Q9BW71 556 aaPredicted RBP32.72■■■□□ 2.83
RBFOX1-219ENST00000569895 MINK1Q8N4C8 1332 aaPredicted RBP32.72■■■□□ 2.83
RBFOX1-219ENST00000569895 HAP1P54257 671 aaPredicted RBP32.68■■■□□ 2.82
RBFOX1-219ENST00000569895 PMFBP1Q8TBY8 1022 aa32.68■■■□□ 2.82
RBFOX1-219ENST00000569895 SBNO1A3KN83 1393 aa32.68■■■□□ 2.82
RBFOX1-219ENST00000569895 WASLO00401 505 aaPredicted RBP32.67■■■□□ 2.82
RBFOX1-219ENST00000569895 ADGRB2O60241 1585 aa32.66■■■□□ 2.82
RBFOX1-219ENST00000569895 LMOD2Q6P5Q4 547 aa32.65■■■□□ 2.82
RBFOX1-219ENST00000569895 RGS12O14924 1447 aa32.65■■■□□ 2.82
RBFOX1-219ENST00000569895 TNS3Q68CZ2 1445 aa32.65■■■□□ 2.82
RBFOX1-219ENST00000569895 ARHGEF10O15013 1369 aa32.63■■■□□ 2.81
RBFOX1-219ENST00000569895 RGPD8O14715 1765 aaPredicted RBP32.63■■■□□ 2.81
RBFOX1-219ENST00000569895 ATRNO75882 1429 aa32.62■■■□□ 2.81
RBFOX1-219ENST00000569895 GPRASP1Q5JY77 1395 aa32.61■■■□□ 2.81
RBFOX1-219ENST00000569895 BCL9LQ86UU0 1499 aa32.6■■■□□ 2.81
RBFOX1-219ENST00000569895 UNC5CLQ8IV45 518 aa32.58■■■□□ 2.81
RBFOX1-219ENST00000569895 TULP4Q9NRJ4 1543 aa32.57■■■□□ 2.8
RBFOX1-219ENST00000569895 NGDNQ8NEJ9 315 aaKnown RBP32.57■■■□□ 2.8
RBFOX1-219ENST00000569895 PRR36Q9H6K5 1346 aa32.56■■■□□ 2.8
RBFOX1-219ENST00000569895 CABLES1Q8TDN4 633 aa32.56■■■□□ 2.8
RBFOX1-219ENST00000569895 GJD4Q96KN9 370 aaPredicted RBP32.56■■■□□ 2.8
RBFOX1-219ENST00000569895 USP32Q8NFA0 1604 aa32.55■■■□□ 2.8
RBFOX1-219ENST00000569895 MARF1Q9Y4F3 1742 aaKnown RBP32.55■■■□□ 2.8
RBFOX1-219ENST00000569895 PLEKHG5O94827 1062 aa32.55■■■□□ 2.8
RBFOX1-219ENST00000569895 NUDT16Q96DE0 195 aaKnown RBP32.52■■■□□ 2.8
RBFOX1-219ENST00000569895 ATAD2Q6PL18 1390 aa32.51■■■□□ 2.79
RBFOX1-219ENST00000569895 SLIT2O94813 1529 aa32.51■■■□□ 2.79
RBFOX1-219ENST00000569895 NBPF1Q3BBV0 1214 aa32.5■■■□□ 2.79
RBFOX1-219ENST00000569895 CDK19Q9BWU1 502 aa32.5■■■□□ 2.79
RBFOX1-219ENST00000569895 KIAA1210Q9ULL0 1709 aa32.49■■■□□ 2.79
RBFOX1-219ENST00000569895 ARHGEF28Q8N1W1 1705 aaKnown RBP32.48■■■□□ 2.79
RBFOX1-219ENST00000569895 PAK3O75914 559 aaPredicted RBP32.47■■■□□ 2.79
RBFOX1-219ENST00000569895 L3MBTL2Q969R5 705 aa32.46■■■□□ 2.79
RBFOX1-219ENST00000569895 CCDC61Q9Y6R9 512 aa32.44■■■□□ 2.78
RBFOX1-219ENST00000569895 FAM83GA6ND36 823 aa32.42■■■□□ 2.78
RBFOX1-219ENST00000569895 VPS72Q15906 364 aa32.42■■■□□ 2.78
RBFOX1-219ENST00000569895 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.42■■■□□ 2.78
RBFOX1-219ENST00000569895 SIN3AQ96ST3 1273 aa32.41■■■□□ 2.78
RBFOX1-219ENST00000569895 ATP7BP35670 1465 aa32.41■■■□□ 2.78
RBFOX1-219ENST00000569895 NEUROD1Q13562 356 aa32.4■■■□□ 2.78
RBFOX1-219ENST00000569895 CCDC9Q9Y3X0 531 aaKnown RBP32.4■■■□□ 2.78
RBFOX1-219ENST00000569895 CENPJQ9HC77 1338 aaPredicted RBP32.4■■■□□ 2.78
RBFOX1-219ENST00000569895 RALGAPBQ86X10 1494 aa32.4■■■□□ 2.78
RBFOX1-219ENST00000569895 TRPM3Q9HCF6 1732 aaPredicted RBP32.39■■■□□ 2.78
RBFOX1-219ENST00000569895 PLEKHG3A1L390 1219 aa32.36■■■□□ 2.77
RBFOX1-219ENST00000569895 SRPK2P78362 688 aaKnown RBP32.36■■■□□ 2.77
RBFOX1-219ENST00000569895 CCDC125Q86Z20 511 aa32.36■■■□□ 2.77
RBFOX1-219ENST00000569895 ITSN1Q15811 1721 aa32.36■■■□□ 2.77
RBFOX1-219ENST00000569895 NBPF8Q3BBV2 869 aa32.35■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms