RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 NRKQ7Z2Y5 1582 aa8.09□□□□□ -1.11
CYLD-216ENST00000569891 NPC1L1Q9UHC9 1359 aa8.08□□□□□ -1.12
CYLD-216ENST00000569891 TESK2Q96S53 571 aa8.08□□□□□ -1.12
CYLD-216ENST00000569891 ARHGEF28Q8N1W1 1705 aaKnown RBP8.08□□□□□ -1.12
CYLD-216ENST00000569891 ATAD2Q6PL18 1390 aa8.08□□□□□ -1.12
CYLD-216ENST00000569891 SZT2Q5T011 3432 aa8.08□□□□□ -1.12
CYLD-216ENST00000569891 VCANP13611 3396 aa8.08□□□□□ -1.12
CYLD-216ENST00000569891 TERF2IPQ9NYB0 399 aa8.08□□□□□ -1.12
CYLD-216ENST00000569891 NGEFQ8N5V2 710 aa8.08□□□□□ -1.12
CYLD-216ENST00000569891 ABCA3Q99758 1704 aa8.08□□□□□ -1.12
CYLD-216ENST00000569891 C11orf95C9JLR9 678 aaPredicted RBP8.07□□□□□ -1.12
CYLD-216ENST00000569891 THEMISQ8N1K5 641 aaPredicted RBP8.07□□□□□ -1.12
CYLD-216ENST00000569891 DNAJC5Q9H3Z4 198 aa8.07□□□□□ -1.12
CYLD-216ENST00000569891 PANK3Q9H999 370 aa8.07□□□□□ -1.12
CYLD-216ENST00000569891 RIMS2Q9UQ26 1411 aa8.07□□□□□ -1.12
CYLD-216ENST00000569891 WDR43Q15061 677 aaKnown RBP eCLIP8.07□□□□□ -1.12
CYLD-216ENST00000569891 TRAK1Q9UPV9 953 aa8.07□□□□□ -1.12
CYLD-216ENST00000569891 RIMS1Q86UR5 1692 aaKnown RBP8.07□□□□□ -1.12
CYLD-216ENST00000569891 INSRP06213 1382 aa8.07□□□□□ -1.12
CYLD-216ENST00000569891 FAM9BQ8IZU0 186 aa8.07□□□□□ -1.12
CYLD-216ENST00000569891 CFAP53Q96M91 514 aa8.07□□□□□ -1.12
CYLD-216ENST00000569891 CHD2O14647 1828 aaKnown RBP8.07□□□□□ -1.12
CYLD-216ENST00000569891 ANKRD26Q9UPS8 1709 aa8.07□□□□□ -1.12
CYLD-216ENST00000569891 CGNL1Q0VF96 1302 aa8.06□□□□□ -1.12
CYLD-216ENST00000569891 HDGFL2Q7Z4V5 671 aaPredicted RBP8.06□□□□□ -1.12
CYLD-216ENST00000569891 PLPPR3Q6T4P5 718 aa8.06□□□□□ -1.12
CYLD-216ENST00000569891 NEXMIFQ5QGS0 1516 aa8.06□□□□□ -1.12
CYLD-216ENST00000569891 PTPRMP28827 1452 aa8.06□□□□□ -1.12
CYLD-216ENST00000569891 NSD2O96028 1365 aa8.06□□□□□ -1.12
CYLD-216ENST00000569891 CFAP65Q6ZU64 1925 aaKnown RBP8.06□□□□□ -1.12
CYLD-216ENST00000569891 GTF3C3Q9Y5Q9 886 aa8.06□□□□□ -1.12
CYLD-216ENST00000569891 SIRT1Q96EB6 747 aa8.05□□□□□ -1.12
CYLD-216ENST00000569891 DISP3Q9P2K9 1392 aa8.05□□□□□ -1.12
CYLD-216ENST00000569891 SHANK3Q9BYB0 1731 aa8.05□□□□□ -1.12
CYLD-216ENST00000569891 ZBED9Q6R2W3 1325 aa8.05□□□□□ -1.12
CYLD-216ENST00000569891 XRN1Q8IZH2 1706 aaKnown RBP8.05□□□□□ -1.12
CYLD-216ENST00000569891 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.04□□□□□ -1.12
CYLD-216ENST00000569891 SRPK2P78362 688 aaKnown RBP8.04□□□□□ -1.12
CYLD-216ENST00000569891 PRUNE2Q8WUY3 3088 aa8.04□□□□□ -1.12
CYLD-216ENST00000569891 PDE3BQ13370 1112 aa8.04□□□□□ -1.12
CYLD-216ENST00000569891 ERICH6BQ5W0A0 696 aa8.04□□□□□ -1.12
CYLD-216ENST00000569891 FBXO31Q5XUX0 539 aaPredicted RBP8.04□□□□□ -1.12
CYLD-216ENST00000569891 NALCNQ8IZF0 1738 aa8.04□□□□□ -1.12
CYLD-216ENST00000569891 PARD3Q8TEW0 1356 aa8.03□□□□□ -1.12
CYLD-216ENST00000569891 A2ML1A8K2U0 1454 aa8.03□□□□□ -1.12
CYLD-216ENST00000569891 LRPPRCP42704 1394 aaKnown RBP8.03□□□□□ -1.12
CYLD-216ENST00000569891 KNDC1Q76NI1 1749 aa8.03□□□□□ -1.12
CYLD-216ENST00000569891 PNNQ9H307 717 aaKnown RBP8.03□□□□□ -1.12
CYLD-216ENST00000569891 YTHDC2Q9H6S0 1430 aaKnown RBP8.03□□□□□ -1.12
CYLD-216ENST00000569891 DLC1Q96QB1 1528 aa8.02□□□□□ -1.12
CYLD-216ENST00000569891 NEFMP07197 916 aa8.02□□□□□ -1.12
CYLD-216ENST00000569891 ADGRB1O14514 1584 aa8.02□□□□□ -1.13
CYLD-216ENST00000569891 CC2D1BQ5T0F9 858 aaKnown RBP8.02□□□□□ -1.13
CYLD-216ENST00000569891 MORC1Q86VD1 984 aa8.02□□□□□ -1.13
CYLD-216ENST00000569891 STK26Q9P289 416 aa8.02□□□□□ -1.13
CYLD-216ENST00000569891 ABCC11Q96J66 1382 aa8.01□□□□□ -1.13
CYLD-216ENST00000569891 TMEM2Q9UHN6 1383 aa8.01□□□□□ -1.13
CYLD-216ENST00000569891 CNGB1Q14028 1251 aaPredicted RBP8.01□□□□□ -1.13
CYLD-216ENST00000569891 CASZ1Q86V15 1759 aa8.01□□□□□ -1.13
CYLD-216ENST00000569891 NUDCQ9Y266 331 aa8.01□□□□□ -1.13
CYLD-216ENST00000569891 TMEM132EQ6IEE7 984 aa8□□□□□ -1.13
CYLD-216ENST00000569891 TXNDC2Q86VQ3 553 aa8□□□□□ -1.13
CYLD-216ENST00000569891 ANKRD36BQ8N2N9 1353 aa8□□□□□ -1.13
CYLD-216ENST00000569891 PLEKHG1Q9ULL1 1385 aa8□□□□□ -1.13
CYLD-216ENST00000569891 FAM135BQ49AJ0 1406 aa8□□□□□ -1.13
CYLD-216ENST00000569891 QRICH2Q9H0J4 1663 aa8□□□□□ -1.13
CYLD-216ENST00000569891 PER1O15534 1290 aaPredicted RBP7.99□□□□□ -1.13
CYLD-216ENST00000569891 NUTM2DQ5VT03 806 aaPredicted RBP7.99□□□□□ -1.13
CYLD-216ENST00000569891 PRAM1Q96QH2 718 aa7.99□□□□□ -1.13
CYLD-216ENST00000569891 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.99□□□□□ -1.13
CYLD-216ENST00000569891 SPENQ96T58 3664 aaKnown RBP7.98□□□□□ -1.13
CYLD-216ENST00000569891 PNISRQ8TF01 805 aaKnown RBP7.98□□□□□ -1.13
CYLD-216ENST00000569891 PIK3R4Q99570 1358 aa7.98□□□□□ -1.13
CYLD-216ENST00000569891 ZNF692Q9BU19 519 aaPredicted RBP7.98□□□□□ -1.13
CYLD-216ENST00000569891 TBX22Q9Y458 520 aa7.98□□□□□ -1.13
CYLD-216ENST00000569891 DIP2AQ14689 1571 aa7.98□□□□□ -1.13
CYLD-216ENST00000569891 ANKLE2Q86XL3 938 aa7.97□□□□□ -1.13
CYLD-216ENST00000569891 MINK1Q8N4C8 1332 aaPredicted RBP7.97□□□□□ -1.13
CYLD-216ENST00000569891 TRPM3Q9HCF6 1732 aaPredicted RBP7.97□□□□□ -1.13
CYLD-216ENST00000569891 PPP2R1AP30153 589 aa7.97□□□□□ -1.13
CYLD-216ENST00000569891 NSD3Q9BZ95 1437 aa7.96□□□□□ -1.13
CYLD-216ENST00000569891 MED14O60244 1454 aa7.96□□□□□ -1.13
CYLD-216ENST00000569891 SCAF1Q9H7N4 1312 aaKnown RBP7.96□□□□□ -1.13
CYLD-216ENST00000569891 AMER1Q5JTC6 1135 aaPredicted RBP7.96□□□□□ -1.14
CYLD-216ENST00000569891 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.96□□□□□ -1.14
CYLD-216ENST00000569891 CDK19Q9BWU1 502 aa7.95□□□□□ -1.14
CYLD-216ENST00000569891 TECPR2O15040 1411 aa7.95□□□□□ -1.14
CYLD-216ENST00000569891 SAFB2Q14151 953 aaKnown RBP eCLIP7.95□□□□□ -1.14
CYLD-216ENST00000569891 AKAP12Q02952 1782 aa7.95□□□□□ -1.14
CYLD-216ENST00000569891 ATP7BP35670 1465 aa7.95□□□□□ -1.14
CYLD-216ENST00000569891 SLIT1O75093 1534 aa7.94□□□□□ -1.14
CYLD-216ENST00000569891 WASLO00401 505 aaPredicted RBP7.94□□□□□ -1.14
CYLD-216ENST00000569891 CCDC61Q9Y6R9 512 aa7.94□□□□□ -1.14
CYLD-216ENST00000569891 POLR3AO14802 1390 aaPredicted RBP7.94□□□□□ -1.14
CYLD-216ENST00000569891 CABP2Q9NPB3 220 aa7.94□□□□□ -1.14
CYLD-216ENST00000569891 SMG6Q86US8 1419 aaKnown RBP7.94□□□□□ -1.14
CYLD-216ENST00000569891 WNK3Q9BYP7 1800 aa7.93□□□□□ -1.14
CYLD-216ENST00000569891 NCBP3Q53F19 620 aaKnown RBP7.93□□□□□ -1.14
CYLD-216ENST00000569891 SLC12A5Q9H2X9 1139 aa7.93□□□□□ -1.14
CYLD-216ENST00000569891 GLI3P10071 1580 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms