RNA–Protein interactions for RNA: ENST00000569842.5

NUP93-220, Transcript of nucleoporin 93, humanhuman

TSL 5 BASIC

Gene NUP93, Length 2,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-220ENST00000569842 TMEM94Q12767 1356 aa17.24■□□□□ 0.35
NUP93-220ENST00000569842 ZNF316A6NFI3 1004 aaPredicted RBP17.24■□□□□ 0.35
NUP93-220ENST00000569842 TMF1P82094 1093 aa17.24■□□□□ 0.35
NUP93-220ENST00000569842 C11orf95C9JLR9 678 aaPredicted RBP17.23■□□□□ 0.35
NUP93-220ENST00000569842 C14orf37Q86TY3 774 aa17.23■□□□□ 0.35
NUP93-220ENST00000569842 SLC24A1O60721 1099 aa17.23■□□□□ 0.35
NUP93-220ENST00000569842 DISP3Q9P2K9 1392 aa17.23■□□□□ 0.35
NUP93-220ENST00000569842 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.22■□□□□ 0.35
NUP93-220ENST00000569842 LRRC7Q96NW7 1537 aa17.21■□□□□ 0.35
NUP93-220ENST00000569842 EVC2Q86UK5 1308 aa17.21■□□□□ 0.35
NUP93-220ENST00000569842 CDK19Q9BWU1 502 aa17.2■□□□□ 0.34
NUP93-220ENST00000569842 ADGRL3Q9HAR2 1447 aa17.19■□□□□ 0.34
NUP93-220ENST00000569842 TULP4Q9NRJ4 1543 aa17.19■□□□□ 0.34
NUP93-220ENST00000569842 WASLO00401 505 aaPredicted RBP17.19■□□□□ 0.34
NUP93-220ENST00000569842 POLR3GLQ9BT43 218 aa17.19■□□□□ 0.34
NUP93-220ENST00000569842 LTBP4Q8N2S1 1624 aa17.19■□□□□ 0.34
NUP93-220ENST00000569842 NCOA3Q9Y6Q9 1424 aa17.18■□□□□ 0.34
NUP93-220ENST00000569842 SRPK2P78362 688 aaKnown RBP17.18■□□□□ 0.34
NUP93-220ENST00000569842 CABP2Q9NPB3 220 aa17.18■□□□□ 0.34
NUP93-220ENST00000569842 KIF7Q2M1P5 1343 aa17.18■□□□□ 0.34
NUP93-220ENST00000569842 C19orf44Q9H6X5 657 aa17.17■□□□□ 0.34
NUP93-220ENST00000569842 WASHC2AQ641Q2 1341 aa17.17■□□□□ 0.34
NUP93-220ENST00000569842 NALCNQ8IZF0 1738 aa17.17■□□□□ 0.34
NUP93-220ENST00000569842 CDCA8Q53HL2 280 aa17.17■□□□□ 0.34
NUP93-220ENST00000569842 ADGRB2O60241 1585 aa17.17■□□□□ 0.34
NUP93-220ENST00000569842 CCDC7Q96M83 1385 aa17.16■□□□□ 0.34
NUP93-220ENST00000569842 NUTM2FA1L443 756 aa17.15■□□□□ 0.34
NUP93-220ENST00000569842 MSH6P52701 1360 aa17.14■□□□□ 0.33
NUP93-220ENST00000569842 XIRP1Q702N8 1843 aaKnown RBP17.14■□□□□ 0.33
NUP93-220ENST00000569842 CDC42BPGQ6DT37 1551 aa17.13■□□□□ 0.33
NUP93-220ENST00000569842 ATF3P18847 181 aa17.12■□□□□ 0.33
NUP93-220ENST00000569842 PUS7Q96PZ0 661 aaKnown RBP17.12■□□□□ 0.33
NUP93-220ENST00000569842 NUDT16Q96DE0 195 aaKnown RBP17.11■□□□□ 0.33
NUP93-220ENST00000569842 PRR36Q9H6K5 1346 aa17.11■□□□□ 0.33
NUP93-220ENST00000569842 DCCP43146 1447 aa17.1■□□□□ 0.33
NUP93-220ENST00000569842 CADPS2Q86UW7 1296 aa17.1■□□□□ 0.33
NUP93-220ENST00000569842 ATAD2Q6PL18 1390 aa17.1■□□□□ 0.33
NUP93-220ENST00000569842 TMC1Q8TDI8 760 aa17.09■□□□□ 0.33
NUP93-220ENST00000569842 ATP7BP35670 1465 aa17.08■□□□□ 0.33
NUP93-220ENST00000569842 FMN2Q9NZ56 1722 aa17.08■□□□□ 0.33
NUP93-220ENST00000569842 CCDC61Q9Y6R9 512 aa17.08■□□□□ 0.33
NUP93-220ENST00000569842 SLC12A5Q9H2X9 1139 aa17.07■□□□□ 0.32
NUP93-220ENST00000569842 ANKARQ7Z5J8 1434 aa17.07■□□□□ 0.32
NUP93-220ENST00000569842 CABP1Q9NZU7 370 aa17.07■□□□□ 0.32
NUP93-220ENST00000569842 DDX10Q13206 875 aaKnown RBP17.06■□□□□ 0.32
NUP93-220ENST00000569842 USP32Q8NFA0 1604 aa17.06■□□□□ 0.32
NUP93-220ENST00000569842 MST1RQ04912 1400 aa17.05■□□□□ 0.32
NUP93-220ENST00000569842 PPIP5K1Q6PFW1 1433 aa17.05■□□□□ 0.32
NUP93-220ENST00000569842 ESCO1Q5FWF5 840 aa17.04■□□□□ 0.32
NUP93-220ENST00000569842 C1orf167Q5SNV9 1468 aa17.04■□□□□ 0.32
NUP93-220ENST00000569842 CERKQ8TCT0 537 aa17.04■□□□□ 0.32
NUP93-220ENST00000569842 ORAI2Q96SN7 254 aa17.03■□□□□ 0.32
NUP93-220ENST00000569842 SLAIN2Q9P270 581 aa17.03■□□□□ 0.32
NUP93-220ENST00000569842 NINLQ9Y2I6 1382 aa17.03■□□□□ 0.32
NUP93-220ENST00000569842 PMFBP1Q8TBY8 1022 aa17.03■□□□□ 0.32
NUP93-220ENST00000569842 MYOM1P52179 1685 aa17.03■□□□□ 0.32
NUP93-220ENST00000569842 PANK3Q9H999 370 aa17.02■□□□□ 0.32
NUP93-220ENST00000569842 RGPD8O14715 1765 aaPredicted RBP17.02■□□□□ 0.31
NUP93-220ENST00000569842 PLEKHG3A1L390 1219 aa17.02■□□□□ 0.31
NUP93-220ENST00000569842 PHF8Q9UPP1 1060 aa17.01■□□□□ 0.31
NUP93-220ENST00000569842 TOPAZ1Q8N9V7 1692 aa17.01■□□□□ 0.31
NUP93-220ENST00000569842 TERF2IPQ9NYB0 399 aa17■□□□□ 0.31
NUP93-220ENST00000569842 ACEP12821 1306 aa16.99■□□□□ 0.31
NUP93-220ENST00000569842 NGDNQ8NEJ9 315 aaKnown RBP16.99■□□□□ 0.31
NUP93-220ENST00000569842 HDGFL2Q7Z4V5 671 aaPredicted RBP16.99■□□□□ 0.31
NUP93-220ENST00000569842 ITSN1Q15811 1721 aa16.99■□□□□ 0.31
NUP93-220ENST00000569842 IQSEC2Q5JU85 1478 aa16.99■□□□□ 0.31
NUP93-220ENST00000569842 CD163L1Q9NR16 1453 aa16.99■□□□□ 0.31
NUP93-220ENST00000569842 ANKRD36BQ8N2N9 1353 aa16.98■□□□□ 0.31
NUP93-220ENST00000569842 A0A1W2PP64 1363 aa16.98■□□□□ 0.31
NUP93-220ENST00000569842 TOM1O60784 492 aa16.97■□□□□ 0.31
NUP93-220ENST00000569842 BRINP3Q76B58 766 aa16.97■□□□□ 0.31
NUP93-220ENST00000569842 UBAP1LF5GYI3 381 aa16.97■□□□□ 0.31
NUP93-220ENST00000569842 CARD14Q9BXL6 1004 aa16.97■□□□□ 0.31
NUP93-220ENST00000569842 CPSF1Q10570 1443 aaKnown RBP16.96■□□□□ 0.31
NUP93-220ENST00000569842 POLR3AO14802 1390 aaPredicted RBP16.96■□□□□ 0.31
NUP93-220ENST00000569842 FOXO3O43524 673 aa16.96■□□□□ 0.31
NUP93-220ENST00000569842 ZNF692Q9BU19 519 aaPredicted RBP16.96■□□□□ 0.3
NUP93-220ENST00000569842 KTN1Q86UP2 1357 aaKnown RBP16.95■□□□□ 0.3
NUP93-220ENST00000569842 PER1O15534 1290 aaPredicted RBP16.93■□□□□ 0.3
NUP93-220ENST00000569842 PSME1Q06323 249 aa16.93■□□□□ 0.3
NUP93-220ENST00000569842 DDX17Q92841 729 aaKnown RBP16.93■□□□□ 0.3
NUP93-220ENST00000569842 PIP4K2BP78356 416 aa16.93■□□□□ 0.3
NUP93-220ENST00000569842 KNSTRNQ9Y448 316 aa16.93■□□□□ 0.3
NUP93-220ENST00000569842 NSD3Q9BZ95 1437 aa16.93■□□□□ 0.3
NUP93-220ENST00000569842 KIF1AQ12756 1690 aa16.92■□□□□ 0.3
NUP93-220ENST00000569842 XPCQ01831 940 aaPredicted RBP16.92■□□□□ 0.3
NUP93-220ENST00000569842 USP6P35125 1406 aa16.92■□□□□ 0.3
NUP93-220ENST00000569842 SCAF1Q9H7N4 1312 aaKnown RBP16.92■□□□□ 0.3
NUP93-220ENST00000569842 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.91■□□□□ 0.3
NUP93-220ENST00000569842 NPHP3Q7Z494 1330 aa16.9■□□□□ 0.3
NUP93-220ENST00000569842 AKAP12Q02952 1782 aa16.9■□□□□ 0.3
NUP93-220ENST00000569842 DIEXFQ68CQ4 756 aaKnown RBP16.9■□□□□ 0.3
NUP93-220ENST00000569842 KRT28Q7Z3Y7 464 aa16.9■□□□□ 0.3
NUP93-220ENST00000569842 EDC4Q6P2E9 1401 aaKnown RBP16.9■□□□□ 0.3
NUP93-220ENST00000569842 CNGB1Q14028 1251 aaPredicted RBP16.89■□□□□ 0.29
NUP93-220ENST00000569842 TTC21BQ7Z4L5 1316 aa16.89■□□□□ 0.29
NUP93-220ENST00000569842 ROBO1Q9Y6N7 1651 aa16.89■□□□□ 0.29
NUP93-220ENST00000569842 PAK3O75914 559 aaPredicted RBP16.88■□□□□ 0.29
NUP93-220ENST00000569842 MON2Q7Z3U7 1717 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms