RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 RBM6P78332 1123 aaKnown RBP18.23■□□□□ 0.51
CAPN3-220ENST00000569827 XPCQ01831 940 aaPredicted RBP18.23■□□□□ 0.51
CAPN3-220ENST00000569827 SRCAPQ6ZRS2 3230 aa18.23■□□□□ 0.51
CAPN3-220ENST00000569827 SOS2Q07890 1332 aaPredicted RBP18.23■□□□□ 0.51
CAPN3-220ENST00000569827 KNDC1Q76NI1 1749 aa18.21■□□□□ 0.51
CAPN3-220ENST00000569827 NUTM2FA1L443 756 aa18.21■□□□□ 0.51
CAPN3-220ENST00000569827 PRAG1Q86YV5 1406 aa18.21■□□□□ 0.51
CAPN3-220ENST00000569827 FMN2Q9NZ56 1722 aa18.2■□□□□ 0.5
CAPN3-220ENST00000569827 ADGRF5Q8IZF2 1346 aa18.2■□□□□ 0.5
CAPN3-220ENST00000569827 STK26Q9P289 416 aa18.19■□□□□ 0.5
CAPN3-220ENST00000569827 USP21Q9UK80 565 aa18.19■□□□□ 0.5
CAPN3-220ENST00000569827 PXDNQ92626 1479 aa18.19■□□□□ 0.5
CAPN3-220ENST00000569827 RGL3Q3MIN7 710 aa18.18■□□□□ 0.5
CAPN3-220ENST00000569827 ESCO1Q5FWF5 840 aa18.18■□□□□ 0.5
CAPN3-220ENST00000569827 PLEKHH1Q9ULM0 1364 aa18.17■□□□□ 0.5
CAPN3-220ENST00000569827 WAPLQ7Z5K2 1190 aa18.17■□□□□ 0.5
CAPN3-220ENST00000569827 RPGRIP1LQ68CZ1 1315 aa18.17■□□□□ 0.5
CAPN3-220ENST00000569827 BRWD3Q6RI45 1802 aa18.16■□□□□ 0.5
CAPN3-220ENST00000569827 MYOM2P54296 1465 aa18.16■□□□□ 0.5
CAPN3-220ENST00000569827 TMEM132EQ6IEE7 984 aa18.15■□□□□ 0.5
CAPN3-220ENST00000569827 CCDC144AA2RUR9 1427 aa18.15■□□□□ 0.5
CAPN3-220ENST00000569827 ATRNO75882 1429 aa18.15■□□□□ 0.5
CAPN3-220ENST00000569827 FOXO3O43524 673 aa18.14■□□□□ 0.49
CAPN3-220ENST00000569827 SPATA31E1Q6ZUB1 1445 aa18.14■□□□□ 0.49
CAPN3-220ENST00000569827 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.13■□□□□ 0.49
CAPN3-220ENST00000569827 TRPC5Q9UL62 973 aaPredicted RBP18.12■□□□□ 0.49
CAPN3-220ENST00000569827 NPHP3Q7Z494 1330 aa18.12■□□□□ 0.49
CAPN3-220ENST00000569827 ATAD2Q6PL18 1390 aa18.12■□□□□ 0.49
CAPN3-220ENST00000569827 KIF1AQ12756 1690 aa18.12■□□□□ 0.49
CAPN3-220ENST00000569827 ABCA3Q99758 1704 aa18.12■□□□□ 0.49
CAPN3-220ENST00000569827 PLEKHG5O94827 1062 aa18.11■□□□□ 0.49
CAPN3-220ENST00000569827 FNBP4Q8N3X1 1017 aaPredicted RBP18.11■□□□□ 0.49
CAPN3-220ENST00000569827 BCL9LQ86UU0 1499 aa18.11■□□□□ 0.49
CAPN3-220ENST00000569827 TECPR2O15040 1411 aa18.1■□□□□ 0.49
CAPN3-220ENST00000569827 LRPPRCP42704 1394 aaKnown RBP18.1■□□□□ 0.49
CAPN3-220ENST00000569827 PLCH1Q4KWH8 1693 aa18.09■□□□□ 0.49
CAPN3-220ENST00000569827 USP32Q8NFA0 1604 aa18.09■□□□□ 0.49
CAPN3-220ENST00000569827 GLI3P10071 1580 aa18.09■□□□□ 0.49
CAPN3-220ENST00000569827 PIK3C2GO75747 1445 aa18.09■□□□□ 0.49
CAPN3-220ENST00000569827 YTHDC2Q9H6S0 1430 aaKnown RBP18.07■□□□□ 0.48
CAPN3-220ENST00000569827 MPHOSPH9Q99550 1183 aa18.07■□□□□ 0.48
CAPN3-220ENST00000569827 ANKRD30BQ9BXX2 1392 aa18.05■□□□□ 0.48
CAPN3-220ENST00000569827 ABCC11Q96J66 1382 aa18.04■□□□□ 0.48
CAPN3-220ENST00000569827 SAFB2Q14151 953 aaKnown RBP eCLIP18.04■□□□□ 0.48
CAPN3-220ENST00000569827 RALGAPBQ86X10 1494 aa18.03■□□□□ 0.48
CAPN3-220ENST00000569827 SPATA31A3Q5VYP0 1347 aa18.02■□□□□ 0.48
CAPN3-220ENST00000569827 CABLES1Q8TDN4 633 aa18.02■□□□□ 0.48
CAPN3-220ENST00000569827 GJD4Q96KN9 370 aaPredicted RBP18.02■□□□□ 0.48
CAPN3-220ENST00000569827 SLIT2O94813 1529 aa18.02■□□□□ 0.47
CAPN3-220ENST00000569827 CFAP70Q5T0N1 1121 aa18■□□□□ 0.47
CAPN3-220ENST00000569827 KRT28Q7Z3Y7 464 aa18■□□□□ 0.47
CAPN3-220ENST00000569827 NWD2Q9ULI1 1742 aa18■□□□□ 0.47
CAPN3-220ENST00000569827 TNS3Q68CZ2 1445 aa17.98■□□□□ 0.47
CAPN3-220ENST00000569827 NRAPQ86VF7 1730 aa17.98■□□□□ 0.47
CAPN3-220ENST00000569827 TRPM3Q9HCF6 1732 aaPredicted RBP17.98■□□□□ 0.47
CAPN3-220ENST00000569827 UNC5CLQ8IV45 518 aa17.98■□□□□ 0.47
CAPN3-220ENST00000569827 NRXN1Q9ULB1 1477 aa17.98■□□□□ 0.47
CAPN3-220ENST00000569827 LMOD2Q6P5Q4 547 aa17.97■□□□□ 0.47
CAPN3-220ENST00000569827 PHF8Q9UPP1 1060 aa17.97■□□□□ 0.47
CAPN3-220ENST00000569827 HAP1P54257 671 aaPredicted RBP17.96■□□□□ 0.47
CAPN3-220ENST00000569827 C14orf93Q9H972 538 aaKnown RBP17.96■□□□□ 0.47
CAPN3-220ENST00000569827 PMFBP1Q8TBY8 1022 aa17.95■□□□□ 0.46
CAPN3-220ENST00000569827 PRAM1Q96QH2 718 aa17.95■□□□□ 0.46
CAPN3-220ENST00000569827 ZRANB1Q9UGI0 708 aa17.95■□□□□ 0.46
CAPN3-220ENST00000569827 ALS2Q96Q42 1657 aa17.95■□□□□ 0.46
CAPN3-220ENST00000569827 CRYBG1Q9Y4K1 1723 aa17.94■□□□□ 0.46
CAPN3-220ENST00000569827 DHX57Q6P158 1386 aaKnown RBP17.93■□□□□ 0.46
CAPN3-220ENST00000569827 ADGRB2O60241 1585 aa17.93■□□□□ 0.46
CAPN3-220ENST00000569827 DEFB132Q7Z7B7 95 aa17.93■□□□□ 0.46
CAPN3-220ENST00000569827 CCDC9Q9Y3X0 531 aaKnown RBP17.93■□□□□ 0.46
CAPN3-220ENST00000569827 HIRIP3Q9BW71 556 aaPredicted RBP17.92■□□□□ 0.46
CAPN3-220ENST00000569827 ADGRB1O14514 1584 aa17.91■□□□□ 0.46
CAPN3-220ENST00000569827 DLC1Q96QB1 1528 aa17.91■□□□□ 0.46
CAPN3-220ENST00000569827 BLMP54132 1417 aaPredicted RBP17.9■□□□□ 0.46
CAPN3-220ENST00000569827 ARHGEF28Q8N1W1 1705 aaKnown RBP17.9■□□□□ 0.46
CAPN3-220ENST00000569827 SEPT12Q8IYM1 358 aa17.9■□□□□ 0.46
CAPN3-220ENST00000569827 POGKQ9P215 609 aa17.9■□□□□ 0.46
CAPN3-220ENST00000569827 PSME1Q06323 249 aa17.89■□□□□ 0.45
CAPN3-220ENST00000569827 MINK1Q8N4C8 1332 aaPredicted RBP17.89■□□□□ 0.45
CAPN3-220ENST00000569827 SBNO1A3KN83 1393 aa17.89■□□□□ 0.45
CAPN3-220ENST00000569827 RAB3GAP2Q9H2M9 1393 aa17.89■□□□□ 0.45
CAPN3-220ENST00000569827 SIRT1Q96EB6 747 aa17.88■□□□□ 0.45
CAPN3-220ENST00000569827 TRAK1Q9UPV9 953 aa17.88■□□□□ 0.45
CAPN3-220ENST00000569827 COL14A1Q05707 1796 aaKnown RBP17.88■□□□□ 0.45
CAPN3-220ENST00000569827 ITSN1Q15811 1721 aa17.87■□□□□ 0.45
CAPN3-220ENST00000569827 A0A0G2JS52 829 aa17.87■□□□□ 0.45
CAPN3-220ENST00000569827 MYT1Q01538 1121 aa17.87■□□□□ 0.45
CAPN3-220ENST00000569827 VPS72Q15906 364 aa17.87■□□□□ 0.45
CAPN3-220ENST00000569827 CCDC125Q86Z20 511 aa17.87■□□□□ 0.45
CAPN3-220ENST00000569827 PRR36Q9H6K5 1346 aa17.87■□□□□ 0.45
CAPN3-220ENST00000569827 FAM83GA6ND36 823 aa17.86■□□□□ 0.45
CAPN3-220ENST00000569827 KDM2AQ9Y2K7 1162 aa17.86■□□□□ 0.45
CAPN3-220ENST00000569827 ARHGEF10O15013 1369 aa17.86■□□□□ 0.45
CAPN3-220ENST00000569827 ANKARQ7Z5J8 1434 aa17.86■□□□□ 0.45
CAPN3-220ENST00000569827 PHRF1Q9P1Y6 1649 aaKnown RBP17.84■□□□□ 0.45
CAPN3-220ENST00000569827 TULP4Q9NRJ4 1543 aa17.84■□□□□ 0.45
CAPN3-220ENST00000569827 RGPD1P0DJD0 1748 aa17.84■□□□□ 0.45
CAPN3-220ENST00000569827 FAM98CQ17RN3 349 aaKnown RBP17.83■□□□□ 0.44
CAPN3-220ENST00000569827 FAM182BQ5T319 152 aa17.83■□□□□ 0.44
CAPN3-220ENST00000569827 KRT27Q7Z3Y8 459 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms