RNA–Protein interactions for RNA: ENST00000569804.2

LPCAT4-208, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 657 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-208ENST00000569804 NAIPQ13075 1403 aa16.42■□□□□ 0.22
LPCAT4-208ENST00000569804 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.42■□□□□ 0.22
LPCAT4-208ENST00000569804 BCL9LQ86UU0 1499 aa16.42■□□□□ 0.22
LPCAT4-208ENST00000569804 HFM1A2PYH4 1435 aa16.41■□□□□ 0.22
LPCAT4-208ENST00000569804 USP21Q9UK80 565 aa16.4■□□□□ 0.22
LPCAT4-208ENST00000569804 TRPC5Q9UL62 973 aaPredicted RBP16.39■□□□□ 0.21
LPCAT4-208ENST00000569804 RRBP1Q9P2E9 1410 aaKnown RBP16.37■□□□□ 0.21
LPCAT4-208ENST00000569804 GLI3P10071 1580 aa16.36■□□□□ 0.21
LPCAT4-208ENST00000569804 KNDC1Q76NI1 1749 aa16.36■□□□□ 0.21
LPCAT4-208ENST00000569804 IFT172Q9UG01 1749 aa16.36■□□□□ 0.21
LPCAT4-208ENST00000569804 TECPR2O15040 1411 aa16.36■□□□□ 0.21
LPCAT4-208ENST00000569804 VGFO15240 615 aaPredicted RBP16.34■□□□□ 0.21
LPCAT4-208ENST00000569804 FMN2Q9NZ56 1722 aa16.33■□□□□ 0.21
LPCAT4-208ENST00000569804 RPGRIP1LQ68CZ1 1315 aa16.33■□□□□ 0.2
LPCAT4-208ENST00000569804 NPHP3Q7Z494 1330 aa16.33■□□□□ 0.2
LPCAT4-208ENST00000569804 SLIT2O94813 1529 aa16.33■□□□□ 0.2
LPCAT4-208ENST00000569804 BRWD3Q6RI45 1802 aa16.33■□□□□ 0.2
LPCAT4-208ENST00000569804 USP32Q8NFA0 1604 aa16.32■□□□□ 0.2
LPCAT4-208ENST00000569804 KIF1AQ12756 1690 aa16.3■□□□□ 0.2
LPCAT4-208ENST00000569804 RALGAPBQ86X10 1494 aa16.3■□□□□ 0.2
LPCAT4-208ENST00000569804 PPARGC1BQ86YN6 1023 aaKnown RBP16.3■□□□□ 0.2
LPCAT4-208ENST00000569804 ABCA3Q99758 1704 aa16.3■□□□□ 0.2
LPCAT4-208ENST00000569804 SPATA31E1Q6ZUB1 1445 aa16.28■□□□□ 0.2
LPCAT4-208ENST00000569804 PLEKHH1Q9ULM0 1364 aa16.28■□□□□ 0.2
LPCAT4-208ENST00000569804 XPCQ01831 940 aaPredicted RBP16.28■□□□□ 0.2
LPCAT4-208ENST00000569804 ESCO1Q5FWF5 840 aa16.28■□□□□ 0.2
LPCAT4-208ENST00000569804 GJD4Q96KN9 370 aaPredicted RBP16.28■□□□□ 0.2
LPCAT4-208ENST00000569804 PLCH1Q4KWH8 1693 aa16.27■□□□□ 0.2
LPCAT4-208ENST00000569804 ADGRF5Q8IZF2 1346 aa16.27■□□□□ 0.2
LPCAT4-208ENST00000569804 FOXO3O43524 673 aa16.27■□□□□ 0.2
LPCAT4-208ENST00000569804 ZRANB1Q9UGI0 708 aa16.27■□□□□ 0.2
LPCAT4-208ENST00000569804 LRPPRCP42704 1394 aaKnown RBP16.26■□□□□ 0.19
LPCAT4-208ENST00000569804 RGPD8O14715 1765 aaPredicted RBP16.26■□□□□ 0.19
LPCAT4-208ENST00000569804 CCDC125Q86Z20 511 aa16.26■□□□□ 0.19
LPCAT4-208ENST00000569804 PIK3C2GO75747 1445 aa16.26■□□□□ 0.19
LPCAT4-208ENST00000569804 BLMP54132 1417 aaPredicted RBP16.26■□□□□ 0.19
LPCAT4-208ENST00000569804 LRP5O75197 1615 aa16.25■□□□□ 0.19
LPCAT4-208ENST00000569804 NWD2Q9ULI1 1742 aa16.25■□□□□ 0.19
LPCAT4-208ENST00000569804 ABCC11Q96J66 1382 aa16.25■□□□□ 0.19
LPCAT4-208ENST00000569804 SPATA31A3Q5VYP0 1347 aa16.24■□□□□ 0.19
LPCAT4-208ENST00000569804 WAPLQ7Z5K2 1190 aa16.24■□□□□ 0.19
LPCAT4-208ENST00000569804 CCDC144AA2RUR9 1427 aa16.24■□□□□ 0.19
LPCAT4-208ENST00000569804 UNC5CLQ8IV45 518 aa16.23■□□□□ 0.19
LPCAT4-208ENST00000569804 SLC4A1APQ9BWU0 796 aaKnown RBP16.22■□□□□ 0.19
LPCAT4-208ENST00000569804 TNS3Q68CZ2 1445 aa16.21■□□□□ 0.19
LPCAT4-208ENST00000569804 NUTM2FA1L443 756 aa16.21■□□□□ 0.19
LPCAT4-208ENST00000569804 NRAPQ86VF7 1730 aa16.21■□□□□ 0.19
LPCAT4-208ENST00000569804 YTHDC2Q9H6S0 1430 aaKnown RBP16.2■□□□□ 0.18
LPCAT4-208ENST00000569804 FOXD1Q16676 465 aa16.2■□□□□ 0.18
LPCAT4-208ENST00000569804 ANKRD30BQ9BXX2 1392 aa16.2■□□□□ 0.18
LPCAT4-208ENST00000569804 NRXN1Q9ULB1 1477 aa16.19■□□□□ 0.18
LPCAT4-208ENST00000569804 DEFB132Q7Z7B7 95 aa16.18■□□□□ 0.18
LPCAT4-208ENST00000569804 STK26Q9P289 416 aa16.18■□□□□ 0.18
LPCAT4-208ENST00000569804 TRPM3Q9HCF6 1732 aaPredicted RBP16.17■□□□□ 0.18
LPCAT4-208ENST00000569804 TMEM132EQ6IEE7 984 aa16.17■□□□□ 0.18
LPCAT4-208ENST00000569804 ONECUT3O60422 494 aaPredicted RBP16.16■□□□□ 0.18
LPCAT4-208ENST00000569804 ADGRB2O60241 1585 aa16.16■□□□□ 0.18
LPCAT4-208ENST00000569804 VPS72Q15906 364 aa16.15■□□□□ 0.18
LPCAT4-208ENST00000569804 CRYBG1Q9Y4K1 1723 aa16.15■□□□□ 0.18
LPCAT4-208ENST00000569804 ALS2Q96Q42 1657 aa16.14■□□□□ 0.18
LPCAT4-208ENST00000569804 SBNO1A3KN83 1393 aa16.14■□□□□ 0.17
LPCAT4-208ENST00000569804 KRT28Q7Z3Y7 464 aa16.14■□□□□ 0.17
LPCAT4-208ENST00000569804 SEPT12Q8IYM1 358 aa16.14■□□□□ 0.17
LPCAT4-208ENST00000569804 RGL3Q3MIN7 710 aa16.13■□□□□ 0.17
LPCAT4-208ENST00000569804 CABLES1Q8TDN4 633 aa16.13■□□□□ 0.17
LPCAT4-208ENST00000569804 SIRT1Q96EB6 747 aa16.13■□□□□ 0.17
LPCAT4-208ENST00000569804 DLC1Q96QB1 1528 aa16.12■□□□□ 0.17
LPCAT4-208ENST00000569804 PHF8Q9UPP1 1060 aa16.11■□□□□ 0.17
LPCAT4-208ENST00000569804 THSD7AQ9UPZ6 1657 aa16.11■□□□□ 0.17
LPCAT4-208ENST00000569804 TNS1Q9HBL0 1735 aaKnown RBP16.11■□□□□ 0.17
LPCAT4-208ENST00000569804 ADGRB1O14514 1584 aa16.1■□□□□ 0.17
LPCAT4-208ENST00000569804 RGPD1P0DJD0 1748 aa16.1■□□□□ 0.17
LPCAT4-208ENST00000569804 ARHGEF10O15013 1369 aa16.1■□□□□ 0.17
LPCAT4-208ENST00000569804 COL14A1Q05707 1796 aaKnown RBP16.1■□□□□ 0.17
LPCAT4-208ENST00000569804 ANKARQ7Z5J8 1434 aa16.1■□□□□ 0.17
LPCAT4-208ENST00000569804 C14orf93Q9H972 538 aaKnown RBP16.09■□□□□ 0.17
LPCAT4-208ENST00000569804 FAM83GA6ND36 823 aa16.08■□□□□ 0.16
LPCAT4-208ENST00000569804 KRT27Q7Z3Y8 459 aa16.08■□□□□ 0.16
LPCAT4-208ENST00000569804 MPHOSPH9Q99550 1183 aa16.07■□□□□ 0.16
LPCAT4-208ENST00000569804 DISP2A7MBM2 1401 aa16.06■□□□□ 0.16
LPCAT4-208ENST00000569804 PSME1Q06323 249 aa16.06■□□□□ 0.16
LPCAT4-208ENST00000569804 SF3B2Q13435 895 aaKnown RBP16.05■□□□□ 0.16
LPCAT4-208ENST00000569804 CFAP70Q5T0N1 1121 aa16.05■□□□□ 0.16
LPCAT4-208ENST00000569804 DHX57Q6P158 1386 aaKnown RBP16.04■□□□□ 0.16
LPCAT4-208ENST00000569804 HRCP23327 699 aa16.04■□□□□ 0.16
LPCAT4-208ENST00000569804 PRAM1Q96QH2 718 aa16.04■□□□□ 0.16
LPCAT4-208ENST00000569804 TULP4Q9NRJ4 1543 aa16.04■□□□□ 0.16
LPCAT4-208ENST00000569804 PRR36Q9H6K5 1346 aa16.03■□□□□ 0.16
LPCAT4-208ENST00000569804 PSDA5PKW4 1024 aaPredicted RBP16.03■□□□□ 0.16
LPCAT4-208ENST00000569804 HAP1P54257 671 aaPredicted RBP16.03■□□□□ 0.16
LPCAT4-208ENST00000569804 PLEKHG5O94827 1062 aa16.02■□□□□ 0.16
LPCAT4-208ENST00000569804 FAM98CQ17RN3 349 aaKnown RBP16.02■□□□□ 0.16
LPCAT4-208ENST00000569804 CCDC9Q9Y3X0 531 aaKnown RBP16.02■□□□□ 0.16
LPCAT4-208ENST00000569804 PHRF1Q9P1Y6 1649 aaKnown RBP16.01■□□□□ 0.15
LPCAT4-208ENST00000569804 SAFB2Q14151 953 aaKnown RBP eCLIP16.01■□□□□ 0.15
LPCAT4-208ENST00000569804 PMFBP1Q8TBY8 1022 aa16.01■□□□□ 0.15
LPCAT4-208ENST00000569804 SPATA31A5Q5VU36 1347 aa16■□□□□ 0.15
LPCAT4-208ENST00000569804 SPATA31A7Q8IWB4 1347 aa16■□□□□ 0.15
LPCAT4-208ENST00000569804 BAG6P46379 1132 aa16■□□□□ 0.15
LPCAT4-208ENST00000569804 LMOD2Q6P5Q4 547 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms