RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 FAM9AQ8IZU1 332 aaPredicted RBP10.19□□□□□ -0.78
LINC00556-201ENST00000569603 CFAP44Q96MT7 982 aa10.19□□□□□ -0.78
LINC00556-201ENST00000569603 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.19□□□□□ -0.78
LINC00556-201ENST00000569603 HPS5Q9UPZ3 1129 aa10.19□□□□□ -0.78
LINC00556-201ENST00000569603 BCORL1Q5H9F3 1711 aa10.19□□□□□ -0.78
LINC00556-201ENST00000569603 NYAP1Q6ZVC0 841 aa10.18□□□□□ -0.78
LINC00556-201ENST00000569603 LRCH3Q96II8 777 aa10.18□□□□□ -0.78
LINC00556-201ENST00000569603 LRRIQ1Q96JM4 1722 aa10.18□□□□□ -0.78
LINC00556-201ENST00000569603 FANCAO15360 1455 aa10.17□□□□□ -0.78
LINC00556-201ENST00000569603 AKNAQ7Z591 1439 aa10.17□□□□□ -0.78
LINC00556-201ENST00000569603 GRXCR2A6NFK2 248 aa10.17□□□□□ -0.78
LINC00556-201ENST00000569603 C3orf80F5H4A9 247 aa10.17□□□□□ -0.78
LINC00556-201ENST00000569603 SMAPO00193 183 aa10.17□□□□□ -0.78
LINC00556-201ENST00000569603 ARIH1Q9Y4X5 557 aaPredicted RBP10.17□□□□□ -0.78
LINC00556-201ENST00000569603 CFAP74Q9C0B2 1584 aa10.17□□□□□ -0.78
LINC00556-201ENST00000569603 PTPRMP28827 1452 aa10.17□□□□□ -0.78
LINC00556-201ENST00000569603 PACS2Q86VP3 889 aa10.16□□□□□ -0.78
LINC00556-201ENST00000569603 CDCA7LQ96GN5 454 aa10.16□□□□□ -0.78
LINC00556-201ENST00000569603 TSR3Q9UJK0 312 aaKnown RBP10.16□□□□□ -0.78
LINC00556-201ENST00000569603 DENND4BO75064 1496 aaPredicted RBP10.16□□□□□ -0.78
LINC00556-201ENST00000569603 MADDQ8WXG6 1647 aa10.15□□□□□ -0.78
LINC00556-201ENST00000569603 PLEKHD1A6NEE1 506 aa10.15□□□□□ -0.78
LINC00556-201ENST00000569603 CDHR5Q9HBB8 845 aa10.15□□□□□ -0.78
LINC00556-201ENST00000569603 PLCH2O75038 1416 aa10.15□□□□□ -0.79
LINC00556-201ENST00000569603 FMN1Q68DA7 1419 aa10.15□□□□□ -0.79
LINC00556-201ENST00000569603 KIF14Q15058 1648 aa10.15□□□□□ -0.79
LINC00556-201ENST00000569603 HECW1Q76N89 1606 aa10.15□□□□□ -0.79
LINC00556-201ENST00000569603 RANGAP1P46060 587 aaPredicted RBP10.14□□□□□ -0.79
LINC00556-201ENST00000569603 PRSS12P56730 875 aa10.14□□□□□ -0.79
LINC00556-201ENST00000569603 KCNC4Q03721 635 aa10.13□□□□□ -0.79
LINC00556-201ENST00000569603 POGZQ7Z3K3 1410 aa10.13□□□□□ -0.79
LINC00556-201ENST00000569603 YEATS2Q9ULM3 1422 aa10.13□□□□□ -0.79
LINC00556-201ENST00000569603 MAGI2Q86UL8 1455 aa10.12□□□□□ -0.79
LINC00556-201ENST00000569603 OSBPP22059 807 aa10.12□□□□□ -0.79
LINC00556-201ENST00000569603 WDR70Q9NW82 654 aa10.12□□□□□ -0.79
LINC00556-201ENST00000569603 MYO5CQ9NQX4 1742 aa10.11□□□□□ -0.79
LINC00556-201ENST00000569603 TROQ12816 1431 aaPredicted RBP10.11□□□□□ -0.79
LINC00556-201ENST00000569603 SAMD7Q7Z3H4 446 aa10.11□□□□□ -0.79
LINC00556-201ENST00000569603 ZFYVE16Q7Z3T8 1539 aa10.11□□□□□ -0.79
LINC00556-201ENST00000569603 LMTK3Q96Q04 1460 aa10.1□□□□□ -0.79
LINC00556-201ENST00000569603 KDM5CP41229 1560 aa10.1□□□□□ -0.79
LINC00556-201ENST00000569603 CERKQ8TCT0 537 aa10.09□□□□□ -0.79
LINC00556-201ENST00000569603 PNMA3Q9UL41 463 aa10.09□□□□□ -0.79
LINC00556-201ENST00000569603 PCF11O94913 1555 aaKnown RBP10.09□□□□□ -0.79
LINC00556-201ENST00000569603 CASKIN1Q8WXD9 1431 aa10.08□□□□□ -0.8
LINC00556-201ENST00000569603 SCAPERQ9BY12 1400 aa10.08□□□□□ -0.8
LINC00556-201ENST00000569603 CDC42BPBQ9Y5S2 1711 aa10.08□□□□□ -0.8
LINC00556-201ENST00000569603 UBTFP17480 764 aaKnown RBP10.08□□□□□ -0.8
LINC00556-201ENST00000569603 TATDN2Q93075 761 aa10.08□□□□□ -0.8
LINC00556-201ENST00000569603 RIMS1Q86UR5 1692 aaKnown RBP10.08□□□□□ -0.8
LINC00556-201ENST00000569603 ARHGEF12Q9NZN5 1544 aa10.07□□□□□ -0.8
LINC00556-201ENST00000569603 NBPF26B4DH59 902 aa10.07□□□□□ -0.8
LINC00556-201ENST00000569603 PPP4CP60510 307 aa10.07□□□□□ -0.8
LINC00556-201ENST00000569603 PREX2Q70Z35 1606 aa10.06□□□□□ -0.8
LINC00556-201ENST00000569603 REREQ9P2R6 1566 aa10.05□□□□□ -0.8
LINC00556-201ENST00000569603 ATP10AO60312 1499 aa10.05□□□□□ -0.8
LINC00556-201ENST00000569603 NUDT18Q6ZVK8 323 aa10.05□□□□□ -0.8
LINC00556-201ENST00000569603 CCDC18Q5T9S5 1454 aa10.04□□□□□ -0.8
LINC00556-201ENST00000569603 ZNF518AQ6AHZ1 1483 aa10.04□□□□□ -0.8
LINC00556-201ENST00000569603 FER1L4A9Z1Z3 1794 aa10.04□□□□□ -0.8
LINC00556-201ENST00000569603 ABCC1P33527 1531 aa10.04□□□□□ -0.8
LINC00556-201ENST00000569603 TJAP1Q5JTD0 557 aa10.04□□□□□ -0.8
LINC00556-201ENST00000569603 EFCAB2Q5VUJ9 269 aa10.04□□□□□ -0.8
LINC00556-201ENST00000569603 ARXQ96QS3 562 aa10.04□□□□□ -0.8
LINC00556-201ENST00000569603 C9orf84Q5VXU9 1444 aa10.04□□□□□ -0.8
LINC00556-201ENST00000569603 DIP2CQ9Y2E4 1556 aa10.04□□□□□ -0.8
LINC00556-201ENST00000569603 CDC42BPAQ5VT25 1732 aa10.04□□□□□ -0.8
LINC00556-201ENST00000569603 FYCO1Q9BQS8 1478 aa10.04□□□□□ -0.8
LINC00556-201ENST00000569603 NPDC1Q9NQX5 325 aaPredicted RBP10.03□□□□□ -0.8
LINC00556-201ENST00000569603 RBM27Q9P2N5 1060 aaKnown RBP10.03□□□□□ -0.8
LINC00556-201ENST00000569603 ABCA6Q8N139 1617 aa10.03□□□□□ -0.8
LINC00556-201ENST00000569603 MLH3Q9UHC1 1453 aa10.03□□□□□ -0.8
LINC00556-201ENST00000569603 ARHGAP5Q13017 1502 aa10.02□□□□□ -0.8
LINC00556-201ENST00000569603 PADI6Q6TGC4 694 aa10.02□□□□□ -0.81
LINC00556-201ENST00000569603 CDK11AQ9UQ88 783 aaPredicted RBP10.02□□□□□ -0.81
LINC00556-201ENST00000569603 ITSN2Q9NZM3 1697 aa10.02□□□□□ -0.81
LINC00556-201ENST00000569603 ARID4BQ4LE39 1312 aaPredicted RBP10.02□□□□□ -0.81
LINC00556-201ENST00000569603 CLIP1P30622 1438 aa10.01□□□□□ -0.81
LINC00556-201ENST00000569603 TRAPPC8Q9Y2L5 1435 aa10.01□□□□□ -0.81
LINC00556-201ENST00000569603 RNF40O75150 1001 aa10.01□□□□□ -0.81
LINC00556-201ENST00000569603 AFAP1Q8N556 730 aa10.01□□□□□ -0.81
LINC00556-201ENST00000569603 TTC13Q8NBP0 860 aa10.01□□□□□ -0.81
LINC00556-201ENST00000569603 MTRQ99707 1265 aa10.01□□□□□ -0.81
LINC00556-201ENST00000569603 KIDINS220Q9ULH0 1771 aa10.01□□□□□ -0.81
LINC00556-201ENST00000569603 AGLP35573 1532 aa10□□□□□ -0.81
LINC00556-201ENST00000569603 SETD1BQ9UPS6 1966 aaKnown RBP9.99□□□□□ -0.81
LINC00556-201ENST00000569603 APLP1P51693 650 aa9.99□□□□□ -0.81
LINC00556-201ENST00000569603 GPATCH8Q9UKJ3 1502 aaKnown RBP9.98□□□□□ -0.81
LINC00556-201ENST00000569603 SAMD9LQ8IVG5 1584 aa9.98□□□□□ -0.81
LINC00556-201ENST00000569603 Q6ZNB5 142 aa9.98□□□□□ -0.81
LINC00556-201ENST00000569603 ZNF516Q92618 1163 aa9.98□□□□□ -0.81
LINC00556-201ENST00000569603 TSHZ2Q9NRE2 1034 aa9.98□□□□□ -0.81
LINC00556-201ENST00000569603 MLLT3P42568 568 aaPredicted RBP9.97□□□□□ -0.81
LINC00556-201ENST00000569603 SWT1Q5T5J6 900 aaKnown RBP9.97□□□□□ -0.81
LINC00556-201ENST00000569603 IL21Q9HBE4 155 aa9.97□□□□□ -0.81
LINC00556-201ENST00000569603 ATP1B4Q9UN42 357 aaPredicted RBP9.97□□□□□ -0.81
LINC00556-201ENST00000569603 PREX1Q8TCU6 1659 aa9.96□□□□□ -0.81
LINC00556-201ENST00000569603 STRCQ7RTU9 1775 aa9.96□□□□□ -0.82
LINC00556-201ENST00000569603 HSPA2P54652 639 aa9.95□□□□□ -0.82
LINC00556-201ENST00000569603 ERICH6Q7L0X2 663 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms