RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 GGT6Q6P531 493 aa10.39□□□□□ -0.75
LINC00559-201ENST00000569476 ABCC11Q96J66 1382 aa10.39□□□□□ -0.75
LINC00559-201ENST00000569476 MS4A1P11836 297 aa10.39□□□□□ -0.75
LINC00559-201ENST00000569476 YTHDC2Q9H6S0 1430 aaKnown RBP10.39□□□□□ -0.75
LINC00559-201ENST00000569476 CPS1P31327 1500 aa10.38□□□□□ -0.75
LINC00559-201ENST00000569476 CCDC27Q2M243 656 aa10.38□□□□□ -0.75
LINC00559-201ENST00000569476 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.38□□□□□ -0.75
LINC00559-201ENST00000569476 A2ML1A8K2U0 1454 aa10.38□□□□□ -0.75
LINC00559-201ENST00000569476 NKTRP30414 1462 aaKnown RBP10.38□□□□□ -0.75
LINC00559-201ENST00000569476 TECPR2O15040 1411 aa10.38□□□□□ -0.75
LINC00559-201ENST00000569476 FAM135BQ49AJ0 1406 aa10.37□□□□□ -0.75
LINC00559-201ENST00000569476 GOLGA2Q08379 1002 aa10.37□□□□□ -0.75
LINC00559-201ENST00000569476 E9PSI1 815 aa10.37□□□□□ -0.75
LINC00559-201ENST00000569476 CFAP53Q96M91 514 aa10.37□□□□□ -0.75
LINC00559-201ENST00000569476 TCERG1O14776 1098 aaKnown RBP10.36□□□□□ -0.75
LINC00559-201ENST00000569476 RAPGEF3O95398 923 aa10.36□□□□□ -0.75
LINC00559-201ENST00000569476 CCDC136Q96JN2 1154 aa10.36□□□□□ -0.75
LINC00559-201ENST00000569476 ADAMTS8Q9UP79 889 aa10.36□□□□□ -0.75
LINC00559-201ENST00000569476 HDGFP51858 240 aaKnown RBP10.35□□□□□ -0.75
LINC00559-201ENST00000569476 CT47B1P0C2W7 299 aaPredicted RBP10.35□□□□□ -0.75
LINC00559-201ENST00000569476 SLFN5Q08AF3 891 aa10.35□□□□□ -0.75
LINC00559-201ENST00000569476 NRXN3Q9Y4C0 1643 aa10.35□□□□□ -0.75
LINC00559-201ENST00000569476 ZMYM3Q14202 1370 aa10.35□□□□□ -0.75
LINC00559-201ENST00000569476 IDI1Q13907 227 aa10.35□□□□□ -0.75
LINC00559-201ENST00000569476 CARD14Q9BXL6 1004 aa10.35□□□□□ -0.75
LINC00559-201ENST00000569476 DIP2AQ14689 1571 aa10.35□□□□□ -0.75
LINC00559-201ENST00000569476 RIMS2Q9UQ26 1411 aa10.34□□□□□ -0.75
LINC00559-201ENST00000569476 NLRP1Q9C000 1473 aa10.34□□□□□ -0.75
LINC00559-201ENST00000569476 PLEKHH1Q9ULM0 1364 aa10.34□□□□□ -0.75
LINC00559-201ENST00000569476 WDR63Q8IWG1 891 aa10.34□□□□□ -0.75
LINC00559-201ENST00000569476 PNNQ9H307 717 aaKnown RBP10.34□□□□□ -0.75
LINC00559-201ENST00000569476 COL3A1P02461 1466 aaPredicted RBP10.34□□□□□ -0.75
LINC00559-201ENST00000569476 DUSP27Q5VZP5 1158 aa10.33□□□□□ -0.75
LINC00559-201ENST00000569476 PHF23Q9BUL5 403 aaPredicted RBP10.33□□□□□ -0.75
LINC00559-201ENST00000569476 RIMS1Q86UR5 1692 aaKnown RBP10.33□□□□□ -0.76
LINC00559-201ENST00000569476 FAM69CQ0P6D2 419 aa10.33□□□□□ -0.76
LINC00559-201ENST00000569476 TERF2IPQ9NYB0 399 aa10.33□□□□□ -0.76
LINC00559-201ENST00000569476 MORC1Q86VD1 984 aa10.33□□□□□ -0.76
LINC00559-201ENST00000569476 RUNDC1Q96C34 613 aa10.33□□□□□ -0.76
LINC00559-201ENST00000569476 MON2Q7Z3U7 1717 aa10.32□□□□□ -0.76
LINC00559-201ENST00000569476 UBR1Q8IWV7 1749 aa10.32□□□□□ -0.76
LINC00559-201ENST00000569476 CHGAP10645 457 aaKnown RBP10.32□□□□□ -0.76
LINC00559-201ENST00000569476 AKAP12Q02952 1782 aa10.31□□□□□ -0.76
LINC00559-201ENST00000569476 ANP32EQ9BTT0 268 aa10.31□□□□□ -0.76
LINC00559-201ENST00000569476 CD163L1Q9NR16 1453 aa10.31□□□□□ -0.76
LINC00559-201ENST00000569476 CFAP65Q6ZU64 1925 aaKnown RBP10.31□□□□□ -0.76
LINC00559-201ENST00000569476 TSPOAP1O95153 1857 aa10.31□□□□□ -0.76
LINC00559-201ENST00000569476 LRRC7Q96NW7 1537 aa10.31□□□□□ -0.76
LINC00559-201ENST00000569476 IL16Q14005 1332 aa10.31□□□□□ -0.76
LINC00559-201ENST00000569476 TRAK1Q9UPV9 953 aa10.3□□□□□ -0.76
LINC00559-201ENST00000569476 PNPLA6Q8IY17 1366 aa10.3□□□□□ -0.76
LINC00559-201ENST00000569476 B4GALNT3Q6L9W6 998 aa10.3□□□□□ -0.76
LINC00559-201ENST00000569476 TOPAZ1Q8N9V7 1692 aa10.3□□□□□ -0.76
LINC00559-201ENST00000569476 IRX6P78412 446 aaPredicted RBP10.3□□□□□ -0.76
LINC00559-201ENST00000569476 PDE3AQ14432 1141 aa10.3□□□□□ -0.76
LINC00559-201ENST00000569476 ITSN1Q15811 1721 aa10.29□□□□□ -0.76
LINC00559-201ENST00000569476 CENPQQ7L2Z9 268 aaPredicted RBP10.28□□□□□ -0.76
LINC00559-201ENST00000569476 HDGFL2Q7Z4V5 671 aaPredicted RBP10.28□□□□□ -0.76
LINC00559-201ENST00000569476 EDC4Q6P2E9 1401 aaKnown RBP10.28□□□□□ -0.76
LINC00559-201ENST00000569476 SLIT1O75093 1534 aa10.28□□□□□ -0.76
LINC00559-201ENST00000569476 A0A1W2PP64 1363 aa10.28□□□□□ -0.76
LINC00559-201ENST00000569476 AATKQ6ZMQ8 1374 aa10.28□□□□□ -0.76
LINC00559-201ENST00000569476 NRKQ7Z2Y5 1582 aa10.27□□□□□ -0.77
LINC00559-201ENST00000569476 TNRQ92752 1358 aa10.27□□□□□ -0.77
LINC00559-201ENST00000569476 CPSF1Q10570 1443 aaKnown RBP10.27□□□□□ -0.77
LINC00559-201ENST00000569476 CYB5RLQ6IPT4 315 aa10.27□□□□□ -0.77
LINC00559-201ENST00000569476 USP54Q70EL1 1684 aa10.26□□□□□ -0.77
LINC00559-201ENST00000569476 KDM2BQ8NHM5 1336 aa10.26□□□□□ -0.77
LINC00559-201ENST00000569476 C3P01024 1663 aa10.26□□□□□ -0.77
LINC00559-201ENST00000569476 PLEKHG1Q9ULL1 1385 aa10.26□□□□□ -0.77
LINC00559-201ENST00000569476 CDK12Q9NYV4 1490 aaPredicted RBP10.26□□□□□ -0.77
LINC00559-201ENST00000569476 ARHGAP23Q9P227 1491 aa10.26□□□□□ -0.77
LINC00559-201ENST00000569476 MYH16Q9H6N6 1097 aa10.26□□□□□ -0.77
LINC00559-201ENST00000569476 EXOC6Q8TAG9 804 aa10.25□□□□□ -0.77
LINC00559-201ENST00000569476 CDCA7LQ96GN5 454 aa10.25□□□□□ -0.77
LINC00559-201ENST00000569476 PPIP5K1Q6PFW1 1433 aa10.25□□□□□ -0.77
LINC00559-201ENST00000569476 VIRMAQ69YN4 1812 aaKnown RBP10.25□□□□□ -0.77
LINC00559-201ENST00000569476 SLC12A5Q9H2X9 1139 aa10.25□□□□□ -0.77
LINC00559-201ENST00000569476 ZNF428Q96B54 188 aa10.24□□□□□ -0.77
LINC00559-201ENST00000569476 TMEM132EQ6IEE7 984 aa10.24□□□□□ -0.77
LINC00559-201ENST00000569476 WWC1Q8IX03 1113 aa10.24□□□□□ -0.77
LINC00559-201ENST00000569476 NALCNQ8IZF0 1738 aa10.23□□□□□ -0.77
LINC00559-201ENST00000569476 POGKQ9P215 609 aa10.23□□□□□ -0.77
LINC00559-201ENST00000569476 TMEM2Q9UHN6 1383 aa10.23□□□□□ -0.77
LINC00559-201ENST00000569476 PTCH1Q13635 1447 aa10.23□□□□□ -0.77
LINC00559-201ENST00000569476 APAF1O14727 1248 aa10.23□□□□□ -0.77
LINC00559-201ENST00000569476 ANP32AP39687 249 aaKnown RBP10.22□□□□□ -0.77
LINC00559-201ENST00000569476 CRBNQ96SW2 442 aa10.22□□□□□ -0.77
LINC00559-201ENST00000569476 STAG3Q9UJ98 1225 aa10.22□□□□□ -0.77
LINC00559-201ENST00000569476 PRAM1Q96QH2 718 aa10.21□□□□□ -0.77
LINC00559-201ENST00000569476 CALD1Q05682 793 aaKnown RBP10.21□□□□□ -0.78
LINC00559-201ENST00000569476 CNGB1Q14028 1251 aaPredicted RBP10.21□□□□□ -0.78
LINC00559-201ENST00000569476 ZNF692Q9BU19 519 aaPredicted RBP10.21□□□□□ -0.78
LINC00559-201ENST00000569476 PIK3R4Q99570 1358 aa10.21□□□□□ -0.78
LINC00559-201ENST00000569476 MTHFSP49914 203 aa10.2□□□□□ -0.78
LINC00559-201ENST00000569476 ESF1Q9H501 851 aaKnown RBP10.2□□□□□ -0.78
LINC00559-201ENST00000569476 SRPK2P78362 688 aaKnown RBP10.2□□□□□ -0.78
LINC00559-201ENST00000569476 CDK19Q9BWU1 502 aa10.2□□□□□ -0.78
LINC00559-201ENST00000569476 BRPF1P55201 1214 aaPredicted RBP10.2□□□□□ -0.78
LINC00559-201ENST00000569476 FER1L4A9Z1Z3 1794 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms