RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 NALCNQ8IZF0 1738 aa10.84□□□□□ -0.67
HERPUD1-217ENST00000569429 TNS1Q9HBL0 1735 aaKnown RBP10.84□□□□□ -0.67
HERPUD1-217ENST00000569429 ADGRL3Q9HAR2 1447 aa10.84□□□□□ -0.67
HERPUD1-217ENST00000569429 KANK1Q14678 1352 aa10.83□□□□□ -0.68
HERPUD1-217ENST00000569429 ERBINQ96RT1 1412 aa10.83□□□□□ -0.68
HERPUD1-217ENST00000569429 PPP1R1BQ9UD71 204 aaPredicted RBP10.82□□□□□ -0.68
HERPUD1-217ENST00000569429 PTPN23Q9H3S7 1636 aa10.81□□□□□ -0.68
HERPUD1-217ENST00000569429 SPON1Q9HCB6 807 aa10.81□□□□□ -0.68
HERPUD1-217ENST00000569429 VPS72Q15906 364 aa10.8□□□□□ -0.68
HERPUD1-217ENST00000569429 EZH2Q15910 746 aaKnown RBP10.8□□□□□ -0.68
HERPUD1-217ENST00000569429 NWD2Q9ULI1 1742 aa10.8□□□□□ -0.68
HERPUD1-217ENST00000569429 CAMKK2Q96RR4 588 aa10.79□□□□□ -0.68
HERPUD1-217ENST00000569429 ORAI2Q96SN7 254 aa10.79□□□□□ -0.68
HERPUD1-217ENST00000569429 KCNQ2O43526 872 aa10.78□□□□□ -0.68
HERPUD1-217ENST00000569429 RREB1Q92766 1687 aa10.78□□□□□ -0.68
HERPUD1-217ENST00000569429 PARD3Q8TEW0 1356 aa10.77□□□□□ -0.68
HERPUD1-217ENST00000569429 GIGYF1O75420 1035 aaPredicted RBP10.77□□□□□ -0.69
HERPUD1-217ENST00000569429 NUP188Q5SRE5 1749 aa10.77□□□□□ -0.69
HERPUD1-217ENST00000569429 KIF15Q9NS87 1388 aa10.77□□□□□ -0.69
HERPUD1-217ENST00000569429 ADGRB2O60241 1585 aa10.76□□□□□ -0.69
HERPUD1-217ENST00000569429 USP32Q8NFA0 1604 aa10.76□□□□□ -0.69
HERPUD1-217ENST00000569429 NRXN3Q9Y4C0 1643 aa10.76□□□□□ -0.69
HERPUD1-217ENST00000569429 NPHP3Q7Z494 1330 aa10.75□□□□□ -0.69
HERPUD1-217ENST00000569429 PLCH1Q4KWH8 1693 aa10.75□□□□□ -0.69
HERPUD1-217ENST00000569429 PXDNQ92626 1479 aa10.74□□□□□ -0.69
HERPUD1-217ENST00000569429 SLC34A2O95436 690 aa10.73□□□□□ -0.69
HERPUD1-217ENST00000569429 NBPF8Q3BBV2 869 aa10.73□□□□□ -0.69
HERPUD1-217ENST00000569429 NBPF14Q5TI25 921 aa10.73□□□□□ -0.69
HERPUD1-217ENST00000569429 ADGRL2O95490 1459 aa10.73□□□□□ -0.69
HERPUD1-217ENST00000569429 GOLGB1Q14789 3259 aaKnown RBP10.73□□□□□ -0.69
HERPUD1-217ENST00000569429 CCDC9Q9Y3X0 531 aaKnown RBP10.72□□□□□ -0.69
HERPUD1-217ENST00000569429 CROCC2H7BZ55 1655 aa10.7□□□□□ -0.7
HERPUD1-217ENST00000569429 METP08581 1390 aa10.7□□□□□ -0.7
HERPUD1-217ENST00000569429 A0A0G2JS52 829 aa10.7□□□□□ -0.7
HERPUD1-217ENST00000569429 CHGAP10645 457 aaKnown RBP10.7□□□□□ -0.7
HERPUD1-217ENST00000569429 MYT1Q01538 1121 aa10.7□□□□□ -0.7
HERPUD1-217ENST00000569429 RRP7BPQ9NSQ0 103 aa10.7□□□□□ -0.7
HERPUD1-217ENST00000569429 NRKQ7Z2Y5 1582 aa10.69□□□□□ -0.7
HERPUD1-217ENST00000569429 MYOM3Q5VTT5 1437 aa10.69□□□□□ -0.7
HERPUD1-217ENST00000569429 FAM98CQ17RN3 349 aaKnown RBP10.69□□□□□ -0.7
HERPUD1-217ENST00000569429 FAM182BQ5T319 152 aa10.69□□□□□ -0.7
HERPUD1-217ENST00000569429 NRAPQ86VF7 1730 aa10.69□□□□□ -0.7
HERPUD1-217ENST00000569429 CASZ1Q86V15 1759 aa10.67□□□□□ -0.7
HERPUD1-217ENST00000569429 LRPPRCP42704 1394 aaKnown RBP10.67□□□□□ -0.7
HERPUD1-217ENST00000569429 MYOM1P52179 1685 aa10.67□□□□□ -0.7
HERPUD1-217ENST00000569429 THSD7AQ9UPZ6 1657 aa10.67□□□□□ -0.7
HERPUD1-217ENST00000569429 IQGAP3Q86VI3 1631 aa10.67□□□□□ -0.7
HERPUD1-217ENST00000569429 FOXO3O43524 673 aa10.67□□□□□ -0.7
HERPUD1-217ENST00000569429 TRIM37O94972 964 aa10.67□□□□□ -0.7
HERPUD1-217ENST00000569429 APBA3O96018 575 aa10.67□□□□□ -0.7
HERPUD1-217ENST00000569429 XPCQ01831 940 aaPredicted RBP10.66□□□□□ -0.7
HERPUD1-217ENST00000569429 PCDH10Q9P2E7 1040 aa10.66□□□□□ -0.7
HERPUD1-217ENST00000569429 SPATA31A3Q5VYP0 1347 aa10.65□□□□□ -0.7
HERPUD1-217ENST00000569429 SHANK3Q9BYB0 1731 aa10.65□□□□□ -0.7
HERPUD1-217ENST00000569429 ESCO1Q5FWF5 840 aa10.65□□□□□ -0.7
HERPUD1-217ENST00000569429 FAM196AQ6ZSG2 479 aa10.65□□□□□ -0.7
HERPUD1-217ENST00000569429 SYT17Q9BSW7 474 aa10.65□□□□□ -0.7
HERPUD1-217ENST00000569429 ABCA3Q99758 1704 aa10.64□□□□□ -0.71
HERPUD1-217ENST00000569429 HSPA6P17066 643 aa10.64□□□□□ -0.71
HERPUD1-217ENST00000569429 ABCC5O15440 1437 aa10.64□□□□□ -0.71
HERPUD1-217ENST00000569429 NEXMIFQ5QGS0 1516 aa10.63□□□□□ -0.71
HERPUD1-217ENST00000569429 FAM83GA6ND36 823 aa10.63□□□□□ -0.71
HERPUD1-217ENST00000569429 PRAG1Q86YV5 1406 aa10.62□□□□□ -0.71
HERPUD1-217ENST00000569429 PTGER2P43116 358 aa10.62□□□□□ -0.71
HERPUD1-217ENST00000569429 CDC42BPGQ6DT37 1551 aa10.61□□□□□ -0.71
HERPUD1-217ENST00000569429 PRELPP51888 382 aa10.61□□□□□ -0.71
HERPUD1-217ENST00000569429 HAP1P54257 671 aaPredicted RBP10.61□□□□□ -0.71
HERPUD1-217ENST00000569429 FHDC1Q9C0D6 1143 aaPredicted RBP10.61□□□□□ -0.71
HERPUD1-217ENST00000569429 DLC1Q96QB1 1528 aa10.61□□□□□ -0.71
HERPUD1-217ENST00000569429 ROBO2Q9HCK4 1378 aa10.61□□□□□ -0.71
HERPUD1-217ENST00000569429 SPATA31A5Q5VU36 1347 aa10.6□□□□□ -0.71
HERPUD1-217ENST00000569429 SPATA31A7Q8IWB4 1347 aa10.6□□□□□ -0.71
HERPUD1-217ENST00000569429 E9PCH4 1651 aa10.6□□□□□ -0.71
HERPUD1-217ENST00000569429 PCNTO95613 3336 aa10.6□□□□□ -0.71
HERPUD1-217ENST00000569429 RGPD3A6NKT7 1758 aaPredicted RBP10.6□□□□□ -0.71
HERPUD1-217ENST00000569429 RGPD4Q7Z3J3 1758 aa10.6□□□□□ -0.71
HERPUD1-217ENST00000569429 HFM1A2PYH4 1435 aa10.59□□□□□ -0.71
HERPUD1-217ENST00000569429 CCDC144AA2RUR9 1427 aa10.59□□□□□ -0.71
HERPUD1-217ENST00000569429 ANKRD30AQ9BXX3 1397 aa10.59□□□□□ -0.71
HERPUD1-217ENST00000569429 KIF1AQ12756 1690 aa10.59□□□□□ -0.71
HERPUD1-217ENST00000569429 COL14A1Q05707 1796 aaKnown RBP10.58□□□□□ -0.72
HERPUD1-217ENST00000569429 CABLES1Q8TDN4 633 aa10.58□□□□□ -0.72
HERPUD1-217ENST00000569429 MAP3K5Q99683 1374 aa10.57□□□□□ -0.72
HERPUD1-217ENST00000569429 CAPN15O75808 1086 aa10.57□□□□□ -0.72
HERPUD1-217ENST00000569429 BTG4Q9NY30 223 aa10.57□□□□□ -0.72
HERPUD1-217ENST00000569429 DAPK1P53355 1430 aa10.57□□□□□ -0.72
HERPUD1-217ENST00000569429 TNS3Q68CZ2 1445 aa10.57□□□□□ -0.72
HERPUD1-217ENST00000569429 ZBTB7AO95365 584 aa10.56□□□□□ -0.72
HERPUD1-217ENST00000569429 KRT28Q7Z3Y7 464 aa10.56□□□□□ -0.72
HERPUD1-217ENST00000569429 RRBP1Q9P2E9 1410 aaKnown RBP10.56□□□□□ -0.72
HERPUD1-217ENST00000569429 COL13A1Q5TAT6 717 aaPredicted RBP10.55□□□□□ -0.72
HERPUD1-217ENST00000569429 PDGFDQ9GZP0 370 aaPredicted RBP10.55□□□□□ -0.72
HERPUD1-217ENST00000569429 SBF2Q86WG5 1849 aa10.54□□□□□ -0.72
HERPUD1-217ENST00000569429 GPR162Q16538 588 aa10.54□□□□□ -0.72
HERPUD1-217ENST00000569429 SGIP1Q9BQI5 828 aa10.54□□□□□ -0.72
HERPUD1-217ENST00000569429 ANO8Q9HCE9 1232 aaPredicted RBP10.54□□□□□ -0.72
HERPUD1-217ENST00000569429 ATF5Q9Y2D1 282 aaPredicted RBP10.54□□□□□ -0.72
HERPUD1-217ENST00000569429 RGPD8O14715 1765 aaPredicted RBP10.54□□□□□ -0.72
HERPUD1-217ENST00000569429 SBNO1A3KN83 1393 aa10.52□□□□□ -0.72
HERPUD1-217ENST00000569429 ARHGEF10O15013 1369 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms