RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 L3MBTL2Q969R5 705 aa13.03□□□□□ -0.32
GTF3C1-210ENST00000569394 POGKQ9P215 609 aa13.03□□□□□ -0.32
GTF3C1-210ENST00000569394 LRPPRCP42704 1394 aaKnown RBP13.03□□□□□ -0.32
GTF3C1-210ENST00000569394 PRAM1Q96QH2 718 aa13.02□□□□□ -0.33
GTF3C1-210ENST00000569394 ADGRL3Q9HAR2 1447 aa13.02□□□□□ -0.33
GTF3C1-210ENST00000569394 MED1Q15648 1581 aaPredicted RBP13.02□□□□□ -0.33
GTF3C1-210ENST00000569394 NBPF1Q3BBV0 1214 aa13.01□□□□□ -0.33
GTF3C1-210ENST00000569394 HIRIP3Q9BW71 556 aaPredicted RBP13.01□□□□□ -0.33
GTF3C1-210ENST00000569394 FAM135BQ49AJ0 1406 aa13.01□□□□□ -0.33
GTF3C1-210ENST00000569394 NRXN1Q9ULB1 1477 aa13.01□□□□□ -0.33
GTF3C1-210ENST00000569394 PHLPP1O60346 1717 aa13□□□□□ -0.33
GTF3C1-210ENST00000569394 PTCH1Q13635 1447 aa13□□□□□ -0.33
GTF3C1-210ENST00000569394 NCOA3Q9Y6Q9 1424 aa13□□□□□ -0.33
GTF3C1-210ENST00000569394 BRINP3Q76B58 766 aa13□□□□□ -0.33
GTF3C1-210ENST00000569394 ORAI2Q96SN7 254 aa13□□□□□ -0.33
GTF3C1-210ENST00000569394 MST1RQ04912 1400 aa12.99□□□□□ -0.33
GTF3C1-210ENST00000569394 MINK1Q8N4C8 1332 aaPredicted RBP12.99□□□□□ -0.33
GTF3C1-210ENST00000569394 LAMC1P11047 1609 aa12.99□□□□□ -0.33
GTF3C1-210ENST00000569394 ABCC11Q96J66 1382 aa12.98□□□□□ -0.33
GTF3C1-210ENST00000569394 ESCO1Q5FWF5 840 aa12.98□□□□□ -0.33
GTF3C1-210ENST00000569394 KNDC1Q76NI1 1749 aa12.97□□□□□ -0.33
GTF3C1-210ENST00000569394 PLEKHG5O94827 1062 aa12.97□□□□□ -0.33
GTF3C1-210ENST00000569394 XPCQ01831 940 aaPredicted RBP12.97□□□□□ -0.33
GTF3C1-210ENST00000569394 NUTM2BA6NNL0 878 aaPredicted RBP12.96□□□□□ -0.33
GTF3C1-210ENST00000569394 NUTM2EB1AL46 878 aaPredicted RBP12.96□□□□□ -0.33
GTF3C1-210ENST00000569394 NUTM2AQ8IVF1 878 aaPredicted RBP12.96□□□□□ -0.33
GTF3C1-210ENST00000569394 TONSLQ96HA7 1378 aa12.95□□□□□ -0.34
GTF3C1-210ENST00000569394 ADGRB1O14514 1584 aa12.95□□□□□ -0.34
GTF3C1-210ENST00000569394 C1orf167Q5SNV9 1468 aa12.95□□□□□ -0.34
GTF3C1-210ENST00000569394 PRAG1Q86YV5 1406 aa12.95□□□□□ -0.34
GTF3C1-210ENST00000569394 SLC4A2P04920 1241 aa12.94□□□□□ -0.34
GTF3C1-210ENST00000569394 TECPR2O15040 1411 aa12.94□□□□□ -0.34
GTF3C1-210ENST00000569394 DCCP43146 1447 aa12.94□□□□□ -0.34
GTF3C1-210ENST00000569394 RGPD8O14715 1765 aaPredicted RBP12.94□□□□□ -0.34
GTF3C1-210ENST00000569394 NBPF8Q3BBV2 869 aa12.93□□□□□ -0.34
GTF3C1-210ENST00000569394 STAC3Q96MF2 364 aa12.93□□□□□ -0.34
GTF3C1-210ENST00000569394 FOXO3O43524 673 aa12.92□□□□□ -0.34
GTF3C1-210ENST00000569394 PMFBP1Q8TBY8 1022 aa12.92□□□□□ -0.34
GTF3C1-210ENST00000569394 CCER1Q8TC90 406 aaPredicted RBP12.92□□□□□ -0.34
GTF3C1-210ENST00000569394 COL16A1Q07092 1604 aaPredicted RBP12.91□□□□□ -0.34
GTF3C1-210ENST00000569394 MEX3CQ5U5Q3 659 aaKnown RBP12.9□□□□□ -0.34
GTF3C1-210ENST00000569394 SIRT1Q96EB6 747 aa12.9□□□□□ -0.34
GTF3C1-210ENST00000569394 ROCK2O75116 1388 aaKnown RBP12.9□□□□□ -0.34
GTF3C1-210ENST00000569394 ARHGEF28Q8N1W1 1705 aaKnown RBP12.9□□□□□ -0.34
GTF3C1-210ENST00000569394 FMN2Q9NZ56 1722 aa12.9□□□□□ -0.34
GTF3C1-210ENST00000569394 CDC42BPGQ6DT37 1551 aa12.9□□□□□ -0.35
GTF3C1-210ENST00000569394 LMOD2Q6P5Q4 547 aa12.89□□□□□ -0.35
GTF3C1-210ENST00000569394 JCADQ9P266 1359 aa12.89□□□□□ -0.35
GTF3C1-210ENST00000569394 DLC1Q96QB1 1528 aa12.88□□□□□ -0.35
GTF3C1-210ENST00000569394 NHSL1Q5SYE7 1610 aa12.88□□□□□ -0.35
GTF3C1-210ENST00000569394 AHDC1Q5TGY3 1603 aaPredicted RBP12.88□□□□□ -0.35
GTF3C1-210ENST00000569394 KIAA1210Q9ULL0 1709 aa12.88□□□□□ -0.35
GTF3C1-210ENST00000569394 TRPM1Q7Z4N2 1603 aa12.88□□□□□ -0.35
GTF3C1-210ENST00000569394 WASLO00401 505 aaPredicted RBP12.87□□□□□ -0.35
GTF3C1-210ENST00000569394 LRRC59Q96AG4 307 aaKnown RBP12.87□□□□□ -0.35
GTF3C1-210ENST00000569394 CDK19Q9BWU1 502 aa12.87□□□□□ -0.35
GTF3C1-210ENST00000569394 PHF8Q9UPP1 1060 aa12.87□□□□□ -0.35
GTF3C1-210ENST00000569394 ADAMTS2O95450 1211 aa12.86□□□□□ -0.35
GTF3C1-210ENST00000569394 CARD11Q9BXL7 1154 aa12.86□□□□□ -0.35
GTF3C1-210ENST00000569394 PRR36Q9H6K5 1346 aa12.86□□□□□ -0.35
GTF3C1-210ENST00000569394 SRPK2P78362 688 aaKnown RBP12.85□□□□□ -0.35
GTF3C1-210ENST00000569394 PSME1Q06323 249 aa12.85□□□□□ -0.35
GTF3C1-210ENST00000569394 KRT28Q7Z3Y7 464 aa12.85□□□□□ -0.35
GTF3C1-210ENST00000569394 CABP2Q9NPB3 220 aa12.85□□□□□ -0.35
GTF3C1-210ENST00000569394 NPHP3Q7Z494 1330 aa12.85□□□□□ -0.35
GTF3C1-210ENST00000569394 CENPJQ9HC77 1338 aaPredicted RBP12.85□□□□□ -0.35
GTF3C1-210ENST00000569394 LRP6O75581 1613 aa12.84□□□□□ -0.35
GTF3C1-210ENST00000569394 USP32Q8NFA0 1604 aa12.84□□□□□ -0.35
GTF3C1-210ENST00000569394 QRICH2Q9H0J4 1663 aa12.83□□□□□ -0.35
GTF3C1-210ENST00000569394 NGDNQ8NEJ9 315 aaKnown RBP12.83□□□□□ -0.36
GTF3C1-210ENST00000569394 NUDT16Q96DE0 195 aaKnown RBP12.83□□□□□ -0.36
GTF3C1-210ENST00000569394 RGS17Q9UGC6 210 aaPredicted RBP12.83□□□□□ -0.36
GTF3C1-210ENST00000569394 SOS2Q07890 1332 aaPredicted RBP12.83□□□□□ -0.36
GTF3C1-210ENST00000569394 PNPLA6Q8IY17 1366 aa12.82□□□□□ -0.36
GTF3C1-210ENST00000569394 PAK3O75914 559 aaPredicted RBP12.82□□□□□ -0.36
GTF3C1-210ENST00000569394 C8orf37Q96NL8 207 aa12.82□□□□□ -0.36
GTF3C1-210ENST00000569394 SHPRHQ149N8 1683 aa12.82□□□□□ -0.36
GTF3C1-210ENST00000569394 CABLES1Q8TDN4 633 aa12.81□□□□□ -0.36
GTF3C1-210ENST00000569394 SPATA31A6Q5VVP1 1343 aa12.81□□□□□ -0.36
GTF3C1-210ENST00000569394 ADGRB2O60241 1585 aa12.81□□□□□ -0.36
GTF3C1-210ENST00000569394 PXDNQ92626 1479 aa12.8□□□□□ -0.36
GTF3C1-210ENST00000569394 HAP1P54257 671 aaPredicted RBP12.8□□□□□ -0.36
GTF3C1-210ENST00000569394 NUTM2GQ5VZR2 741 aa12.8□□□□□ -0.36
GTF3C1-210ENST00000569394 KIF1AQ12756 1690 aa12.8□□□□□ -0.36
GTF3C1-210ENST00000569394 TULP4Q9NRJ4 1543 aa12.79□□□□□ -0.36
GTF3C1-210ENST00000569394 POTEAQ6S8J7 498 aa12.78□□□□□ -0.36
GTF3C1-210ENST00000569394 NGLY1Q96IV0 654 aa12.78□□□□□ -0.36
GTF3C1-210ENST00000569394 ANKARQ7Z5J8 1434 aa12.78□□□□□ -0.36
GTF3C1-210ENST00000569394 EIF3AQ14152 1382 aaKnown RBP12.77□□□□□ -0.37
GTF3C1-210ENST00000569394 CABP1Q9NZU7 370 aa12.76□□□□□ -0.37
GTF3C1-210ENST00000569394 ACEP12821 1306 aa12.76□□□□□ -0.37
GTF3C1-210ENST00000569394 AFF2P51816 1311 aa12.76□□□□□ -0.37
GTF3C1-210ENST00000569394 SPATA31A3Q5VYP0 1347 aa12.76□□□□□ -0.37
GTF3C1-210ENST00000569394 EVC2Q86UK5 1308 aa12.76□□□□□ -0.37
GTF3C1-210ENST00000569394 GPRASP1Q5JY77 1395 aa12.76□□□□□ -0.37
GTF3C1-210ENST00000569394 ATP7BP35670 1465 aa12.76□□□□□ -0.37
GTF3C1-210ENST00000569394 RALGAPBQ86X10 1494 aa12.76□□□□□ -0.37
GTF3C1-210ENST00000569394 ITSN1Q15811 1721 aa12.75□□□□□ -0.37
GTF3C1-210ENST00000569394 PPIP5K1Q6PFW1 1433 aa12.75□□□□□ -0.37
GTF3C1-210ENST00000569394 CCDC61Q9Y6R9 512 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms