RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 SPINK5Q9NQ38 1064 aaPredicted RBP17.08■□□□□ 0.32
CHRFAM7A-206ENST00000569278 EP400Q96L91 3159 aa17.08■□□□□ 0.32
CHRFAM7A-206ENST00000569278 ROBO2Q9HCK4 1378 aa17.07■□□□□ 0.32
CHRFAM7A-206ENST00000569278 ZNF772Q68DY9 489 aaPredicted RBP17.07■□□□□ 0.32
CHRFAM7A-206ENST00000569278 TRIM52Q96A61 297 aa17.07■□□□□ 0.32
CHRFAM7A-206ENST00000569278 MEX3CQ5U5Q3 659 aaKnown RBP17.06■□□□□ 0.32
CHRFAM7A-206ENST00000569278 AFF2P51816 1311 aa17.05■□□□□ 0.32
CHRFAM7A-206ENST00000569278 NUTM2BA6NNL0 878 aaPredicted RBP17.05■□□□□ 0.32
CHRFAM7A-206ENST00000569278 NUTM2EB1AL46 878 aaPredicted RBP17.05■□□□□ 0.32
CHRFAM7A-206ENST00000569278 NUTM2AQ8IVF1 878 aaPredicted RBP17.05■□□□□ 0.32
CHRFAM7A-206ENST00000569278 ZNF326Q5BKZ1 582 aaKnown RBP17.04■□□□□ 0.32
CHRFAM7A-206ENST00000569278 COL22A1Q8NFW1 1626 aaPredicted RBP17.03■□□□□ 0.32
CHRFAM7A-206ENST00000569278 HFM1A2PYH4 1435 aa17.02■□□□□ 0.31
CHRFAM7A-206ENST00000569278 ATF5Q9Y2D1 282 aaPredicted RBP17.01■□□□□ 0.31
CHRFAM7A-206ENST00000569278 ATXN8OSP0DMR3 200 aa17■□□□□ 0.31
CHRFAM7A-206ENST00000569278 RXRBP28702 533 aa17■□□□□ 0.31
CHRFAM7A-206ENST00000569278 CDC42BPGQ6DT37 1551 aa17■□□□□ 0.31
CHRFAM7A-206ENST00000569278 IFT172Q9UG01 1749 aa17■□□□□ 0.31
CHRFAM7A-206ENST00000569278 CAPN15O75808 1086 aa16.99■□□□□ 0.31
CHRFAM7A-206ENST00000569278 SOS2Q07890 1332 aaPredicted RBP16.98■□□□□ 0.31
CHRFAM7A-206ENST00000569278 LRRC59Q96AG4 307 aaKnown RBP16.98■□□□□ 0.31
CHRFAM7A-206ENST00000569278 C8orf37Q96NL8 207 aa16.97■□□□□ 0.31
CHRFAM7A-206ENST00000569278 ORAI2Q96SN7 254 aa16.97■□□□□ 0.31
CHRFAM7A-206ENST00000569278 MYOM2P54296 1465 aa16.97■□□□□ 0.31
CHRFAM7A-206ENST00000569278 PXDNQ92626 1479 aa16.97■□□□□ 0.31
CHRFAM7A-206ENST00000569278 KNDC1Q76NI1 1749 aa16.94■□□□□ 0.3
CHRFAM7A-206ENST00000569278 MARF1Q9Y4F3 1742 aaKnown RBP16.94■□□□□ 0.3
CHRFAM7A-206ENST00000569278 TECPR2O15040 1411 aa16.94■□□□□ 0.3
CHRFAM7A-206ENST00000569278 SPATA31E1Q6ZUB1 1445 aa16.94■□□□□ 0.3
CHRFAM7A-206ENST00000569278 ATRNO75882 1429 aa16.92■□□□□ 0.3
CHRFAM7A-206ENST00000569278 ADAMTS2O95450 1211 aa16.91■□□□□ 0.3
CHRFAM7A-206ENST00000569278 RBM6P78332 1123 aaKnown RBP16.91■□□□□ 0.3
CHRFAM7A-206ENST00000569278 QTRT2Q9H974 415 aaKnown RBP16.91■□□□□ 0.3
CHRFAM7A-206ENST00000569278 RPGRIP1LQ68CZ1 1315 aa16.9■□□□□ 0.3
CHRFAM7A-206ENST00000569278 ADGRF5Q8IZF2 1346 aa16.9■□□□□ 0.3
CHRFAM7A-206ENST00000569278 FMN2Q9NZ56 1722 aa16.9■□□□□ 0.3
CHRFAM7A-206ENST00000569278 BCL9LQ86UU0 1499 aa16.89■□□□□ 0.29
CHRFAM7A-206ENST00000569278 VGFO15240 615 aaPredicted RBP16.89■□□□□ 0.29
CHRFAM7A-206ENST00000569278 PLEKHH1Q9ULM0 1364 aa16.89■□□□□ 0.29
CHRFAM7A-206ENST00000569278 FNBP4Q8N3X1 1017 aaPredicted RBP16.88■□□□□ 0.29
CHRFAM7A-206ENST00000569278 PIK3C2GO75747 1445 aa16.87■□□□□ 0.29
CHRFAM7A-206ENST00000569278 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.87■□□□□ 0.29
CHRFAM7A-206ENST00000569278 ZNF219Q9P2Y4 722 aaPredicted RBP16.86■□□□□ 0.29
CHRFAM7A-206ENST00000569278 NGLY1Q96IV0 654 aa16.85■□□□□ 0.29
CHRFAM7A-206ENST00000569278 LRPPRCP42704 1394 aaKnown RBP16.85■□□□□ 0.29
CHRFAM7A-206ENST00000569278 GLI3P10071 1580 aa16.85■□□□□ 0.29
CHRFAM7A-206ENST00000569278 USP21Q9UK80 565 aa16.84■□□□□ 0.29
CHRFAM7A-206ENST00000569278 ABCA3Q99758 1704 aa16.84■□□□□ 0.29
CHRFAM7A-206ENST00000569278 KIF1AQ12756 1690 aa16.83■□□□□ 0.28
CHRFAM7A-206ENST00000569278 RGPD8O14715 1765 aaPredicted RBP16.82■□□□□ 0.28
CHRFAM7A-206ENST00000569278 USP32Q8NFA0 1604 aa16.82■□□□□ 0.28
CHRFAM7A-206ENST00000569278 NRXN1Q9ULB1 1477 aa16.82■□□□□ 0.28
CHRFAM7A-206ENST00000569278 CCDC144AA2RUR9 1427 aa16.82■□□□□ 0.28
CHRFAM7A-206ENST00000569278 ATAD2Q6PL18 1390 aa16.82■□□□□ 0.28
CHRFAM7A-206ENST00000569278 ABCC11Q96J66 1382 aa16.82■□□□□ 0.28
CHRFAM7A-206ENST00000569278 XPCQ01831 940 aaPredicted RBP16.82■□□□□ 0.28
CHRFAM7A-206ENST00000569278 WAPLQ7Z5K2 1190 aa16.82■□□□□ 0.28
CHRFAM7A-206ENST00000569278 SLIT2O94813 1529 aa16.81■□□□□ 0.28
CHRFAM7A-206ENST00000569278 NPHP3Q7Z494 1330 aa16.81■□□□□ 0.28
CHRFAM7A-206ENST00000569278 TRPC5Q9UL62 973 aaPredicted RBP16.8■□□□□ 0.28
CHRFAM7A-206ENST00000569278 YTHDC2Q9H6S0 1430 aaKnown RBP16.79■□□□□ 0.28
CHRFAM7A-206ENST00000569278 FOXO3O43524 673 aa16.79■□□□□ 0.28
CHRFAM7A-206ENST00000569278 ESCO1Q5FWF5 840 aa16.79■□□□□ 0.28
CHRFAM7A-206ENST00000569278 ANKRD30BQ9BXX2 1392 aa16.78■□□□□ 0.28
CHRFAM7A-206ENST00000569278 BRWD3Q6RI45 1802 aa16.78■□□□□ 0.28
CHRFAM7A-206ENST00000569278 TMEM132EQ6IEE7 984 aa16.78■□□□□ 0.28
CHRFAM7A-206ENST00000569278 PLCH1Q4KWH8 1693 aa16.78■□□□□ 0.28
CHRFAM7A-206ENST00000569278 NUTM2FA1L443 756 aa16.77■□□□□ 0.28
CHRFAM7A-206ENST00000569278 STK26Q9P289 416 aa16.77■□□□□ 0.28
CHRFAM7A-206ENST00000569278 RALGAPBQ86X10 1494 aa16.77■□□□□ 0.28
CHRFAM7A-206ENST00000569278 SPATA31A3Q5VYP0 1347 aa16.75■□□□□ 0.27
CHRFAM7A-206ENST00000569278 RGL3Q3MIN7 710 aa16.75■□□□□ 0.27
CHRFAM7A-206ENST00000569278 ADGRB1O14514 1584 aa16.74■□□□□ 0.27
CHRFAM7A-206ENST00000569278 ADGRB2O60241 1585 aa16.74■□□□□ 0.27
CHRFAM7A-206ENST00000569278 MPHOSPH9Q99550 1183 aa16.74■□□□□ 0.27
CHRFAM7A-206ENST00000569278 TRPM3Q9HCF6 1732 aaPredicted RBP16.73■□□□□ 0.27
CHRFAM7A-206ENST00000569278 TNS3Q68CZ2 1445 aa16.73■□□□□ 0.27
CHRFAM7A-206ENST00000569278 NRAPQ86VF7 1730 aa16.73■□□□□ 0.27
CHRFAM7A-206ENST00000569278 NWD2Q9ULI1 1742 aa16.73■□□□□ 0.27
CHRFAM7A-206ENST00000569278 GJD4Q96KN9 370 aaPredicted RBP16.72■□□□□ 0.27
CHRFAM7A-206ENST00000569278 CRYBG1Q9Y4K1 1723 aa16.71■□□□□ 0.27
CHRFAM7A-206ENST00000569278 DSG3P32926 999 aa16.71■□□□□ 0.27
CHRFAM7A-206ENST00000569278 DLC1Q96QB1 1528 aa16.7■□□□□ 0.26
CHRFAM7A-206ENST00000569278 ALS2Q96Q42 1657 aa16.69■□□□□ 0.26
CHRFAM7A-206ENST00000569278 ABCB7O75027 752 aa16.69■□□□□ 0.26
CHRFAM7A-206ENST00000569278 C14orf93Q9H972 538 aaKnown RBP16.69■□□□□ 0.26
CHRFAM7A-206ENST00000569278 UNC5CLQ8IV45 518 aa16.68■□□□□ 0.26
CHRFAM7A-206ENST00000569278 CFAP70Q5T0N1 1121 aa16.67■□□□□ 0.26
CHRFAM7A-206ENST00000569278 SIRT1Q96EB6 747 aa16.67■□□□□ 0.26
CHRFAM7A-206ENST00000569278 SBNO1A3KN83 1393 aa16.66■□□□□ 0.26
CHRFAM7A-206ENST00000569278 KRT28Q7Z3Y7 464 aa16.66■□□□□ 0.26
CHRFAM7A-206ENST00000569278 CABLES1Q8TDN4 633 aa16.66■□□□□ 0.26
CHRFAM7A-206ENST00000569278 BLMP54132 1417 aaPredicted RBP16.65■□□□□ 0.26
CHRFAM7A-206ENST00000569278 PHF8Q9UPP1 1060 aa16.65■□□□□ 0.26
CHRFAM7A-206ENST00000569278 ANKARQ7Z5J8 1434 aa16.64■□□□□ 0.25
CHRFAM7A-206ENST00000569278 POLA2Q14181 598 aa16.63■□□□□ 0.25
CHRFAM7A-206ENST00000569278 PRAM1Q96QH2 718 aa16.63■□□□□ 0.25
CHRFAM7A-206ENST00000569278 PRR36Q9H6K5 1346 aa16.63■□□□□ 0.25
CHRFAM7A-206ENST00000569278 TULP4Q9NRJ4 1543 aa16.61■□□□□ 0.25
CHRFAM7A-206ENST00000569278 SAFB2Q14151 953 aaKnown RBP eCLIP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms