RNA–Protein interactions for RNA: ENST00000569238.1

AP000842.3-202, humanhuman

BASIC

Gene AP000842.3, Length 1,080 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000842.3-202ENST00000569238 MST1RQ04912 1400 aa23.65■■□□□ 1.38
AP000842.3-202ENST00000569238 HSPA1LP34931 641 aa23.64■■□□□ 1.37
AP000842.3-202ENST00000569238 PRAM1Q96QH2 718 aa23.64■■□□□ 1.37
AP000842.3-202ENST00000569238 CDC42BPGQ6DT37 1551 aa23.63■■□□□ 1.37
AP000842.3-202ENST00000569238 TRPM1Q7Z4N2 1603 aa23.62■■□□□ 1.37
AP000842.3-202ENST00000569238 ARHGEF28Q8N1W1 1705 aaKnown RBP23.6■■□□□ 1.37
AP000842.3-202ENST00000569238 NBPF8Q3BBV2 869 aa23.6■■□□□ 1.37
AP000842.3-202ENST00000569238 POGKQ9P215 609 aa23.6■■□□□ 1.37
AP000842.3-202ENST00000569238 SAFB2Q14151 953 aaKnown RBP eCLIP23.59■■□□□ 1.37
AP000842.3-202ENST00000569238 CCER1Q8TC90 406 aaPredicted RBP23.58■■□□□ 1.37
AP000842.3-202ENST00000569238 C1orf167Q5SNV9 1468 aa23.57■■□□□ 1.36
AP000842.3-202ENST00000569238 BRINP3Q76B58 766 aa23.57■■□□□ 1.36
AP000842.3-202ENST00000569238 ROCK2O75116 1388 aaKnown RBP23.54■■□□□ 1.36
AP000842.3-202ENST00000569238 ADGRB2O60241 1585 aa23.54■■□□□ 1.36
AP000842.3-202ENST00000569238 FMN2Q9NZ56 1722 aa23.53■■□□□ 1.36
AP000842.3-202ENST00000569238 GPRASP1Q5JY77 1395 aa23.52■■□□□ 1.36
AP000842.3-202ENST00000569238 AHDC1Q5TGY3 1603 aaPredicted RBP23.51■■□□□ 1.35
AP000842.3-202ENST00000569238 MINK1Q8N4C8 1332 aaPredicted RBP23.51■■□□□ 1.35
AP000842.3-202ENST00000569238 PHLPP1O60346 1717 aa23.5■■□□□ 1.35
AP000842.3-202ENST00000569238 RALGAPBQ86X10 1494 aa23.5■■□□□ 1.35
AP000842.3-202ENST00000569238 ORAI2Q96SN7 254 aa23.5■■□□□ 1.35
AP000842.3-202ENST00000569238 TIMELESSQ9UNS1 1208 aa23.5■■□□□ 1.35
AP000842.3-202ENST00000569238 NUTM2FA1L443 756 aa23.49■■□□□ 1.35
AP000842.3-202ENST00000569238 HIRIP3Q9BW71 556 aaPredicted RBP23.49■■□□□ 1.35
AP000842.3-202ENST00000569238 NHSL1Q5SYE7 1610 aa23.48■■□□□ 1.35
AP000842.3-202ENST00000569238 COL16A1Q07092 1604 aaPredicted RBP23.47■■□□□ 1.35
AP000842.3-202ENST00000569238 CENPJQ9HC77 1338 aaPredicted RBP23.46■■□□□ 1.35
AP000842.3-202ENST00000569238 ESCO1Q5FWF5 840 aa23.45■■□□□ 1.34
AP000842.3-202ENST00000569238 WASLO00401 505 aaPredicted RBP23.44■■□□□ 1.34
AP000842.3-202ENST00000569238 ANKARQ7Z5J8 1434 aa23.43■■□□□ 1.34
AP000842.3-202ENST00000569238 DDX17Q92841 729 aaKnown RBP23.43■■□□□ 1.34
AP000842.3-202ENST00000569238 CARD11Q9BXL7 1154 aa23.43■■□□□ 1.34
AP000842.3-202ENST00000569238 RGPD8O14715 1765 aaPredicted RBP23.42■■□□□ 1.34
AP000842.3-202ENST00000569238 USP32Q8NFA0 1604 aa23.42■■□□□ 1.34
AP000842.3-202ENST00000569238 QRICH2Q9H0J4 1663 aa23.41■■□□□ 1.34
AP000842.3-202ENST00000569238 EIF3AQ14152 1382 aaKnown RBP23.41■■□□□ 1.34
AP000842.3-202ENST00000569238 TULP4Q9NRJ4 1543 aa23.41■■□□□ 1.34
AP000842.3-202ENST00000569238 KIF1AQ12756 1690 aa23.39■■□□□ 1.34
AP000842.3-202ENST00000569238 JCADQ9P266 1359 aa23.39■■□□□ 1.33
AP000842.3-202ENST00000569238 PRR36Q9H6K5 1346 aa23.38■■□□□ 1.33
AP000842.3-202ENST00000569238 SOS2Q07890 1332 aaPredicted RBP23.37■■□□□ 1.33
AP000842.3-202ENST00000569238 CDK19Q9BWU1 502 aa23.37■■□□□ 1.33
AP000842.3-202ENST00000569238 NPHP3Q7Z494 1330 aa23.36■■□□□ 1.33
AP000842.3-202ENST00000569238 FOXO3O43524 673 aa23.36■■□□□ 1.33
AP000842.3-202ENST00000569238 PHF8Q9UPP1 1060 aa23.36■■□□□ 1.33
AP000842.3-202ENST00000569238 ATP7BP35670 1465 aa23.36■■□□□ 1.33
AP000842.3-202ENST00000569238 LRRC59Q96AG4 307 aaKnown RBP23.34■■□□□ 1.33
AP000842.3-202ENST00000569238 SHPRHQ149N8 1683 aa23.33■■□□□ 1.33
AP000842.3-202ENST00000569238 PXDNQ92626 1479 aa23.33■■□□□ 1.33
AP000842.3-202ENST00000569238 MED1Q15648 1581 aaPredicted RBP23.32■■□□□ 1.32
AP000842.3-202ENST00000569238 NUDT16Q96DE0 195 aaKnown RBP23.32■■□□□ 1.32
AP000842.3-202ENST00000569238 ITSN1Q15811 1721 aa23.31■■□□□ 1.32
AP000842.3-202ENST00000569238 PMFBP1Q8TBY8 1022 aa23.31■■□□□ 1.32
AP000842.3-202ENST00000569238 SBNO2Q9Y2G9 1366 aa23.3■■□□□ 1.32
AP000842.3-202ENST00000569238 XPCQ01831 940 aaPredicted RBP23.3■■□□□ 1.32
AP000842.3-202ENST00000569238 TOPAZ1Q8N9V7 1692 aa23.29■■□□□ 1.32
AP000842.3-202ENST00000569238 SRPK2P78362 688 aaKnown RBP23.29■■□□□ 1.32
AP000842.3-202ENST00000569238 EVC2Q86UK5 1308 aa23.29■■□□□ 1.32
AP000842.3-202ENST00000569238 PNPLA6Q8IY17 1366 aa23.28■■□□□ 1.32
AP000842.3-202ENST00000569238 CABP2Q9NPB3 220 aa23.28■■□□□ 1.32
AP000842.3-202ENST00000569238 CCDC61Q9Y6R9 512 aa23.27■■□□□ 1.32
AP000842.3-202ENST00000569238 SPATA31A6Q5VVP1 1343 aa23.27■■□□□ 1.32
AP000842.3-202ENST00000569238 KRT28Q7Z3Y7 464 aa23.26■■□□□ 1.31
AP000842.3-202ENST00000569238 USP47Q96K76 1375 aa23.25■■□□□ 1.31
AP000842.3-202ENST00000569238 ST20-MTHFSA0A0A6YYL1 179 aa23.24■■□□□ 1.31
AP000842.3-202ENST00000569238 PSME1Q06323 249 aa23.24■■□□□ 1.31
AP000842.3-202ENST00000569238 DISP3Q9P2K9 1392 aa23.24■■□□□ 1.31
AP000842.3-202ENST00000569238 NGDNQ8NEJ9 315 aaKnown RBP23.23■■□□□ 1.31
AP000842.3-202ENST00000569238 LRP6O75581 1613 aa23.22■■□□□ 1.31
AP000842.3-202ENST00000569238 PLEKHG3A1L390 1219 aa23.22■■□□□ 1.31
AP000842.3-202ENST00000569238 SPATA31A3Q5VYP0 1347 aa23.22■■□□□ 1.31
AP000842.3-202ENST00000569238 TESK2Q96S53 571 aa23.21■■□□□ 1.31
AP000842.3-202ENST00000569238 SBNO1A3KN83 1393 aa23.21■■□□□ 1.31
AP000842.3-202ENST00000569238 PPIP5K1Q6PFW1 1433 aa23.21■■□□□ 1.31
AP000842.3-202ENST00000569238 COL22A1Q8NFW1 1626 aaPredicted RBP23.2■■□□□ 1.3
AP000842.3-202ENST00000569238 POLR3AO14802 1390 aaPredicted RBP23.2■■□□□ 1.3
AP000842.3-202ENST00000569238 TNS3Q68CZ2 1445 aa23.19■■□□□ 1.3
AP000842.3-202ENST00000569238 TRPM3Q9HCF6 1732 aaPredicted RBP23.19■■□□□ 1.3
AP000842.3-202ENST00000569238 ACEP12821 1306 aa23.18■■□□□ 1.3
AP000842.3-202ENST00000569238 NUTM2BA6NNL0 878 aaPredicted RBP23.17■■□□□ 1.3
AP000842.3-202ENST00000569238 NUTM2EB1AL46 878 aaPredicted RBP23.17■■□□□ 1.3
AP000842.3-202ENST00000569238 NUTM2AQ8IVF1 878 aaPredicted RBP23.17■■□□□ 1.3
AP000842.3-202ENST00000569238 CABP1Q9NZU7 370 aa23.17■■□□□ 1.3
AP000842.3-202ENST00000569238 ATAD2Q6PL18 1390 aa23.16■■□□□ 1.3
AP000842.3-202ENST00000569238 SLC24A1O60721 1099 aa23.15■■□□□ 1.3
AP000842.3-202ENST00000569238 PHF23Q9BUL5 403 aaPredicted RBP23.15■■□□□ 1.3
AP000842.3-202ENST00000569238 ARHGEF10O15013 1369 aa23.14■■□□□ 1.29
AP000842.3-202ENST00000569238 ALS2Q96Q42 1657 aa23.13■■□□□ 1.29
AP000842.3-202ENST00000569238 MEX3CQ5U5Q3 659 aaKnown RBP23.12■■□□□ 1.29
AP000842.3-202ENST00000569238 PUS7Q96PZ0 661 aaKnown RBP23.12■■□□□ 1.29
AP000842.3-202ENST00000569238 LMOD2Q6P5Q4 547 aa23.11■■□□□ 1.29
AP000842.3-202ENST00000569238 PAK3O75914 559 aaPredicted RBP23.1■■□□□ 1.29
AP000842.3-202ENST00000569238 ADAMTS2O95450 1211 aa23.08■■□□□ 1.29
AP000842.3-202ENST00000569238 TMF1P82094 1093 aa23.08■■□□□ 1.29
AP000842.3-202ENST00000569238 RGS17Q9UGC6 210 aaPredicted RBP23.08■■□□□ 1.29
AP000842.3-202ENST00000569238 USP6P35125 1406 aa23.08■■□□□ 1.28
AP000842.3-202ENST00000569238 BRD4O60885 1362 aaPredicted RBP23.07■■□□□ 1.28
AP000842.3-202ENST00000569238 EIF4G2P78344 907 aaKnown RBP eCLIP23.07■■□□□ 1.28
AP000842.3-202ENST00000569238 AKAP12Q02952 1782 aa23.06■■□□□ 1.28
AP000842.3-202ENST00000569238 CPSF1Q10570 1443 aaKnown RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms