RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 FOXO3O43524 673 aa13.26□□□□□ -0.29
SMG1-216ENST00000569122 LAMC1P11047 1609 aa13.26□□□□□ -0.29
SMG1-216ENST00000569122 RPGRIP1LQ68CZ1 1315 aa13.25□□□□□ -0.29
SMG1-216ENST00000569122 SEPT12Q8IYM1 358 aa13.25□□□□□ -0.29
SMG1-216ENST00000569122 E9PCH4 1651 aa13.24□□□□□ -0.29
SMG1-216ENST00000569122 ROBO2Q9HCK4 1378 aa13.24□□□□□ -0.29
SMG1-216ENST00000569122 ONECUT3O60422 494 aaPredicted RBP13.24□□□□□ -0.29
SMG1-216ENST00000569122 HAP1P54257 671 aaPredicted RBP13.24□□□□□ -0.29
SMG1-216ENST00000569122 HRCP23327 699 aa13.23□□□□□ -0.29
SMG1-216ENST00000569122 VPS72Q15906 364 aa13.23□□□□□ -0.29
SMG1-216ENST00000569122 KRT27Q7Z3Y8 459 aa13.23□□□□□ -0.29
SMG1-216ENST00000569122 IQGAP3Q86VI3 1631 aa13.23□□□□□ -0.29
SMG1-216ENST00000569122 NRXN3Q9Y4C0 1643 aa13.23□□□□□ -0.29
SMG1-216ENST00000569122 RALGAPBQ86X10 1494 aa13.23□□□□□ -0.29
SMG1-216ENST00000569122 PRAG1Q86YV5 1406 aa13.22□□□□□ -0.29
SMG1-216ENST00000569122 COL22A1Q8NFW1 1626 aaPredicted RBP13.22□□□□□ -0.29
SMG1-216ENST00000569122 CCDC9Q9Y3X0 531 aaKnown RBP13.22□□□□□ -0.29
SMG1-216ENST00000569122 SLIT2O94813 1529 aa13.2□□□□□ -0.3
SMG1-216ENST00000569122 XPCQ01831 940 aaPredicted RBP13.2□□□□□ -0.3
SMG1-216ENST00000569122 PSME1Q06323 249 aa13.2□□□□□ -0.3
SMG1-216ENST00000569122 SPATA31A3Q5VYP0 1347 aa13.19□□□□□ -0.3
SMG1-216ENST00000569122 PXDNQ92626 1479 aa13.19□□□□□ -0.3
SMG1-216ENST00000569122 PSDA5PKW4 1024 aaPredicted RBP13.19□□□□□ -0.3
SMG1-216ENST00000569122 LRP5O75197 1615 aa13.19□□□□□ -0.3
SMG1-216ENST00000569122 NALCNQ8IZF0 1738 aa13.19□□□□□ -0.3
SMG1-216ENST00000569122 A0A0G2JS52 829 aa13.18□□□□□ -0.3
SMG1-216ENST00000569122 MYT1Q01538 1121 aa13.18□□□□□ -0.3
SMG1-216ENST00000569122 KRT28Q7Z3Y7 464 aa13.17□□□□□ -0.3
SMG1-216ENST00000569122 NEXMIFQ5QGS0 1516 aa13.17□□□□□ -0.3
SMG1-216ENST00000569122 CCDC144AA2RUR9 1427 aa13.16□□□□□ -0.3
SMG1-216ENST00000569122 DCAF8L1A6NGE4 600 aa13.16□□□□□ -0.3
SMG1-216ENST00000569122 ITGAEP38570 1179 aa13.15□□□□□ -0.3
SMG1-216ENST00000569122 NUTM2FA1L443 756 aa13.14□□□□□ -0.31
SMG1-216ENST00000569122 YY1P25490 414 aa13.14□□□□□ -0.31
SMG1-216ENST00000569122 NAIPQ13075 1403 aa13.13□□□□□ -0.31
SMG1-216ENST00000569122 SPHKAPQ2M3C7 1700 aa13.13□□□□□ -0.31
SMG1-216ENST00000569122 GLI3P10071 1580 aa13.13□□□□□ -0.31
SMG1-216ENST00000569122 CDC42BPGQ6DT37 1551 aa13.13□□□□□ -0.31
SMG1-216ENST00000569122 R3HDM1Q15032 1099 aaKnown RBP13.13□□□□□ -0.31
SMG1-216ENST00000569122 ARHGEF10O15013 1369 aa13.12□□□□□ -0.31
SMG1-216ENST00000569122 EN1Q05925 392 aaPredicted RBP13.12□□□□□ -0.31
SMG1-216ENST00000569122 STK26Q9P289 416 aa13.12□□□□□ -0.31
SMG1-216ENST00000569122 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.12□□□□□ -0.31
SMG1-216ENST00000569122 FAM98CQ17RN3 349 aaKnown RBP13.11□□□□□ -0.31
SMG1-216ENST00000569122 LMOD2Q6P5Q4 547 aa13.11□□□□□ -0.31
SMG1-216ENST00000569122 WAPLQ7Z5K2 1190 aa13.11□□□□□ -0.31
SMG1-216ENST00000569122 SIRT1Q96EB6 747 aa13.11□□□□□ -0.31
SMG1-216ENST00000569122 PHF8Q9UPP1 1060 aa13.11□□□□□ -0.31
SMG1-216ENST00000569122 SBNO1A3KN83 1393 aa13.1□□□□□ -0.31
SMG1-216ENST00000569122 ABCC11Q96J66 1382 aa13.1□□□□□ -0.31
SMG1-216ENST00000569122 FAM83GA6ND36 823 aa13.09□□□□□ -0.31
SMG1-216ENST00000569122 TNS3Q68CZ2 1445 aa13.09□□□□□ -0.31
SMG1-216ENST00000569122 CABLES1Q8TDN4 633 aa13.09□□□□□ -0.31
SMG1-216ENST00000569122 DISP2A7MBM2 1401 aa13.08□□□□□ -0.32
SMG1-216ENST00000569122 TECPR2O15040 1411 aa13.08□□□□□ -0.32
SMG1-216ENST00000569122 NBPF8Q3BBV2 869 aa13.07□□□□□ -0.32
SMG1-216ENST00000569122 NBPF14Q5TI25 921 aa13.07□□□□□ -0.32
SMG1-216ENST00000569122 FAM196AQ6ZSG2 479 aa13.07□□□□□ -0.32
SMG1-216ENST00000569122 BTG4Q9NY30 223 aa13.07□□□□□ -0.32
SMG1-216ENST00000569122 MARF1Q9Y4F3 1742 aaKnown RBP13.07□□□□□ -0.32
SMG1-216ENST00000569122 PARD3Q8TEW0 1356 aa13.07□□□□□ -0.32
SMG1-216ENST00000569122 CLTCL1P53675 1640 aa13.06□□□□□ -0.32
SMG1-216ENST00000569122 USP32Q8NFA0 1604 aa13.06□□□□□ -0.32
SMG1-216ENST00000569122 SLC4A1APQ9BWU0 796 aaKnown RBP13.06□□□□□ -0.32
SMG1-216ENST00000569122 ANKRD30BQ9BXX2 1392 aa13.06□□□□□ -0.32
SMG1-216ENST00000569122 PLEKHG5O94827 1062 aa13.05□□□□□ -0.32
SMG1-216ENST00000569122 PPP1R1BQ9UD71 204 aaPredicted RBP13.05□□□□□ -0.32
SMG1-216ENST00000569122 EZH2Q15910 746 aaKnown RBP13.04□□□□□ -0.32
SMG1-216ENST00000569122 CAMKK2Q96RR4 588 aa13.04□□□□□ -0.32
SMG1-216ENST00000569122 SPATA31A5Q5VU36 1347 aa13.04□□□□□ -0.32
SMG1-216ENST00000569122 SPATA31A7Q8IWB4 1347 aa13.04□□□□□ -0.32
SMG1-216ENST00000569122 ADGRF5Q8IZF2 1346 aa13.04□□□□□ -0.32
SMG1-216ENST00000569122 APBA3O96018 575 aa13.03□□□□□ -0.32
SMG1-216ENST00000569122 TMEM132EQ6IEE7 984 aa13.03□□□□□ -0.32
SMG1-216ENST00000569122 KIF1AQ12756 1690 aa13.02□□□□□ -0.32
SMG1-216ENST00000569122 KIF1BO60333 1816 aa13.02□□□□□ -0.32
SMG1-216ENST00000569122 SPON1Q9HCB6 807 aa13.02□□□□□ -0.33
SMG1-216ENST00000569122 GPRASP1Q5JY77 1395 aa13.02□□□□□ -0.33
SMG1-216ENST00000569122 NWD2Q9ULI1 1742 aa13.02□□□□□ -0.33
SMG1-216ENST00000569122 TRIM37O94972 964 aa13.01□□□□□ -0.33
SMG1-216ENST00000569122 RGL3Q3MIN7 710 aa13.01□□□□□ -0.33
SMG1-216ENST00000569122 PLEKHH1Q9ULM0 1364 aa13.01□□□□□ -0.33
SMG1-216ENST00000569122 RRBP1Q9P2E9 1410 aaKnown RBP13.01□□□□□ -0.33
SMG1-216ENST00000569122 NRXN1Q9ULB1 1477 aa13□□□□□ -0.33
SMG1-216ENST00000569122 DHX57Q6P158 1386 aaKnown RBP13□□□□□ -0.33
SMG1-216ENST00000569122 C11orf95C9JLR9 678 aaPredicted RBP13□□□□□ -0.33
SMG1-216ENST00000569122 FAM182BQ5T319 152 aa13□□□□□ -0.33
SMG1-216ENST00000569122 BRWD3Q6RI45 1802 aa12.99□□□□□ -0.33
SMG1-216ENST00000569122 YTHDC2Q9H6S0 1430 aaKnown RBP12.99□□□□□ -0.33
SMG1-216ENST00000569122 PDE3BQ13370 1112 aa12.99□□□□□ -0.33
SMG1-216ENST00000569122 PRDM11Q9NQV5 511 aa12.99□□□□□ -0.33
SMG1-216ENST00000569122 NINLQ9Y2I6 1382 aa12.98□□□□□ -0.33
SMG1-216ENST00000569122 KCNQ2O43526 872 aa12.98□□□□□ -0.33
SMG1-216ENST00000569122 PMFBP1Q8TBY8 1022 aa12.98□□□□□ -0.33
SMG1-216ENST00000569122 POGKQ9P215 609 aa12.98□□□□□ -0.33
SMG1-216ENST00000569122 ANKARQ7Z5J8 1434 aa12.97□□□□□ -0.33
SMG1-216ENST00000569122 EIF3AQ14152 1382 aaKnown RBP12.97□□□□□ -0.33
SMG1-216ENST00000569122 C14orf93Q9H972 538 aaKnown RBP12.97□□□□□ -0.33
SMG1-216ENST00000569122 ADGRB2O60241 1585 aa12.97□□□□□ -0.33
SMG1-216ENST00000569122 SPATA31A1Q5TZJ5 1347 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms