RNA–Protein interactions for RNA: ENST00000569110.1

TSC2-225, Transcript of TSC complex subunit 2, humanhuman

TSL 5

Gene TSC2, Length 1,687 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-225ENST00000569110 NCKAP5LQ9HCH0 1330 aa22.84■■□□□ 1.25
TSC2-225ENST00000569110 PUS7Q96PZ0 661 aaKnown RBP22.84■■□□□ 1.25
TSC2-225ENST00000569110 PANK3Q9H999 370 aa22.83■■□□□ 1.24
TSC2-225ENST00000569110 MINK1Q8N4C8 1332 aaPredicted RBP22.82■■□□□ 1.24
TSC2-225ENST00000569110 PER1O15534 1290 aaPredicted RBP22.82■■□□□ 1.24
TSC2-225ENST00000569110 ROBO2Q9HCK4 1378 aa22.81■■□□□ 1.24
TSC2-225ENST00000569110 XRN1Q8IZH2 1706 aaKnown RBP22.8■■□□□ 1.24
TSC2-225ENST00000569110 CHD2O14647 1828 aaKnown RBP22.8■■□□□ 1.24
TSC2-225ENST00000569110 PRKRIP1Q9H875 184 aaPredicted RBP22.8■■□□□ 1.24
TSC2-225ENST00000569110 PIK3R4Q99570 1358 aa22.79■■□□□ 1.24
TSC2-225ENST00000569110 AMOTL2Q9Y2J4 779 aa22.78■■□□□ 1.24
TSC2-225ENST00000569110 NPHP4O75161 1426 aaPredicted RBP22.78■■□□□ 1.24
TSC2-225ENST00000569110 STRCQ7RTU9 1775 aa22.77■■□□□ 1.24
TSC2-225ENST00000569110 CCER2I3L3R5 266 aa22.76■■□□□ 1.23
TSC2-225ENST00000569110 CABP2Q9NPB3 220 aa22.76■■□□□ 1.23
TSC2-225ENST00000569110 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.76■■□□□ 1.23
TSC2-225ENST00000569110 PTCH1Q13635 1447 aa22.75■■□□□ 1.23
TSC2-225ENST00000569110 CDK19Q9BWU1 502 aa22.74■■□□□ 1.23
TSC2-225ENST00000569110 SRPK2P78362 688 aaKnown RBP22.72■■□□□ 1.23
TSC2-225ENST00000569110 SLC12A5Q9H2X9 1139 aa22.72■■□□□ 1.23
TSC2-225ENST00000569110 ADGRB2O60241 1585 aa22.71■■□□□ 1.23
TSC2-225ENST00000569110 KCNA6P17658 529 aa22.7■■□□□ 1.22
TSC2-225ENST00000569110 TMC1Q8TDI8 760 aa22.7■■□□□ 1.22
TSC2-225ENST00000569110 ATAD2Q6PL18 1390 aa22.69■■□□□ 1.22
TSC2-225ENST00000569110 WASLO00401 505 aaPredicted RBP22.69■■□□□ 1.22
TSC2-225ENST00000569110 CARD14Q9BXL6 1004 aa22.69■■□□□ 1.22
TSC2-225ENST00000569110 NINLQ9Y2I6 1382 aa22.67■■□□□ 1.22
TSC2-225ENST00000569110 CNGB1Q14028 1251 aaPredicted RBP22.67■■□□□ 1.22
TSC2-225ENST00000569110 KNSTRNQ9Y448 316 aa22.67■■□□□ 1.22
TSC2-225ENST00000569110 KTN1Q86UP2 1357 aaKnown RBP22.66■■□□□ 1.22
TSC2-225ENST00000569110 AMER1Q5JTC6 1135 aaPredicted RBP22.66■■□□□ 1.22
TSC2-225ENST00000569110 PARD3Q8TEW0 1356 aa22.65■■□□□ 1.22
TSC2-225ENST00000569110 RALBP1Q15311 655 aa22.64■■□□□ 1.21
TSC2-225ENST00000569110 ANKRD36BQ8N2N9 1353 aa22.64■■□□□ 1.21
TSC2-225ENST00000569110 NPC1L1Q9UHC9 1359 aa22.63■■□□□ 1.21
TSC2-225ENST00000569110 NWD1Q149M9 1564 aa22.63■■□□□ 1.21
TSC2-225ENST00000569110 CCDC184Q52MB2 194 aa22.62■■□□□ 1.21
TSC2-225ENST00000569110 CC2D1BQ5T0F9 858 aaKnown RBP22.62■■□□□ 1.21
TSC2-225ENST00000569110 CD163L1Q9NR16 1453 aa22.62■■□□□ 1.21
TSC2-225ENST00000569110 CABP1Q9NZU7 370 aa22.6■■□□□ 1.21
TSC2-225ENST00000569110 USP32Q8NFA0 1604 aa22.6■■□□□ 1.21
TSC2-225ENST00000569110 NUDT16Q96DE0 195 aaKnown RBP22.59■■□□□ 1.21
TSC2-225ENST00000569110 NSD3Q9BZ95 1437 aa22.59■■□□□ 1.21
TSC2-225ENST00000569110 ATP7BP35670 1465 aa22.59■■□□□ 1.21
TSC2-225ENST00000569110 A0A1W2PP64 1363 aa22.59■■□□□ 1.21
TSC2-225ENST00000569110 PRR36Q9H6K5 1346 aa22.57■■□□□ 1.2
TSC2-225ENST00000569110 NALCNQ8IZF0 1738 aa22.57■■□□□ 1.2
TSC2-225ENST00000569110 TOPAZ1Q8N9V7 1692 aa22.57■■□□□ 1.2
TSC2-225ENST00000569110 MYBBP1AQ9BQG0 1328 aaKnown RBP22.57■■□□□ 1.2
TSC2-225ENST00000569110 ZNF335Q9H4Z2 1342 aaPredicted RBP22.57■■□□□ 1.2
TSC2-225ENST00000569110 STRCP1A6NGW2 1772 aa22.56■■□□□ 1.2
TSC2-225ENST00000569110 PPIP5K1Q6PFW1 1433 aa22.56■■□□□ 1.2
TSC2-225ENST00000569110 RGPD8O14715 1765 aaPredicted RBP22.55■■□□□ 1.2
TSC2-225ENST00000569110 TERF2IPQ9NYB0 399 aa22.55■■□□□ 1.2
TSC2-225ENST00000569110 CCDC61Q9Y6R9 512 aa22.55■■□□□ 1.2
TSC2-225ENST00000569110 YTHDC1Q96MU7 727 aaKnown RBP22.55■■□□□ 1.2
TSC2-225ENST00000569110 FMN2Q9NZ56 1722 aa22.53■■□□□ 1.2
TSC2-225ENST00000569110 AKAP12Q02952 1782 aa22.53■■□□□ 1.2
TSC2-225ENST00000569110 CERKQ8TCT0 537 aa22.53■■□□□ 1.2
TSC2-225ENST00000569110 MRS2Q9HD23 443 aa22.53■■□□□ 1.2
TSC2-225ENST00000569110 CPSF1Q10570 1443 aaKnown RBP22.52■■□□□ 1.2
TSC2-225ENST00000569110 CDC42BPGQ6DT37 1551 aa22.52■■□□□ 1.2
TSC2-225ENST00000569110 HDGFL2Q7Z4V5 671 aaPredicted RBP22.52■■□□□ 1.2
TSC2-225ENST00000569110 NKTRP30414 1462 aaKnown RBP22.51■■□□□ 1.19
TSC2-225ENST00000569110 RBM33Q96EV2 1170 aaKnown RBP22.51■■□□□ 1.19
TSC2-225ENST00000569110 ITSN1Q15811 1721 aa22.5■■□□□ 1.19
TSC2-225ENST00000569110 BRD4O60885 1362 aaPredicted RBP22.5■■□□□ 1.19
TSC2-225ENST00000569110 CGNL1Q0VF96 1302 aa22.5■■□□□ 1.19
TSC2-225ENST00000569110 ADGRL3Q9HAR2 1447 aa22.5■■□□□ 1.19
TSC2-225ENST00000569110 MON2Q7Z3U7 1717 aa22.49■■□□□ 1.19
TSC2-225ENST00000569110 NUTM2FA1L443 756 aa22.49■■□□□ 1.19
TSC2-225ENST00000569110 NLRP13Q86W25 1043 aa22.49■■□□□ 1.19
TSC2-225ENST00000569110 PLEKHG3A1L390 1219 aa22.48■■□□□ 1.19
TSC2-225ENST00000569110 PROSER2Q86WR7 435 aaPredicted RBP22.47■■□□□ 1.19
TSC2-225ENST00000569110 ANKARQ7Z5J8 1434 aa22.47■■□□□ 1.19
TSC2-225ENST00000569110 KIF20BQ96Q89 1820 aa22.46■■□□□ 1.19
TSC2-225ENST00000569110 PPP2R1AP30153 589 aa22.46■■□□□ 1.19
TSC2-225ENST00000569110 ANKRD26Q9UPS8 1709 aa22.46■■□□□ 1.19
TSC2-225ENST00000569110 NSD2O96028 1365 aa22.46■■□□□ 1.19
TSC2-225ENST00000569110 FYB1O15117 783 aa22.43■■□□□ 1.18
TSC2-225ENST00000569110 EDC4Q6P2E9 1401 aaKnown RBP22.43■■□□□ 1.18
TSC2-225ENST00000569110 LTBP4Q8N2S1 1624 aa22.43■■□□□ 1.18
TSC2-225ENST00000569110 ZNF692Q9BU19 519 aaPredicted RBP22.42■■□□□ 1.18
TSC2-225ENST00000569110 ACEP12821 1306 aa22.42■■□□□ 1.18
TSC2-225ENST00000569110 MORC1Q86VD1 984 aa22.42■■□□□ 1.18
TSC2-225ENST00000569110 PNISRQ8TF01 805 aaKnown RBP22.42■■□□□ 1.18
TSC2-225ENST00000569110 XIRP1Q702N8 1843 aaKnown RBP22.4■■□□□ 1.18
TSC2-225ENST00000569110 NRKQ7Z2Y5 1582 aa22.4■■□□□ 1.18
TSC2-225ENST00000569110 POLR3AO14802 1390 aaPredicted RBP22.4■■□□□ 1.18
TSC2-225ENST00000569110 FAM9BQ8IZU0 186 aa22.39■■□□□ 1.18
TSC2-225ENST00000569110 NCOA3Q9Y6Q9 1424 aa22.39■■□□□ 1.18
TSC2-225ENST00000569110 C14orf37Q86TY3 774 aa22.39■■□□□ 1.17
TSC2-225ENST00000569110 TMEM94Q12767 1356 aa22.38■■□□□ 1.17
TSC2-225ENST00000569110 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.38■■□□□ 1.17
TSC2-225ENST00000569110 GGNBP2Q9H3C7 697 aa22.38■■□□□ 1.17
TSC2-225ENST00000569110 PMFBP1Q8TBY8 1022 aa22.37■■□□□ 1.17
TSC2-225ENST00000569110 C19orf44Q9H6X5 657 aa22.36■■□□□ 1.17
TSC2-225ENST00000569110 USP6P35125 1406 aa22.36■■□□□ 1.17
TSC2-225ENST00000569110 FBXO41Q8TF61 875 aa22.36■■□□□ 1.17
TSC2-225ENST00000569110 SSH2Q76I76 1423 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms