RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 KNDC1Q76NI1 1749 aa20.32■□□□□ 0.84
CNOT1-215ENST00000569020 SOS2Q07890 1332 aaPredicted RBP20.31■□□□□ 0.84
CNOT1-215ENST00000569020 CDK12Q9NYV4 1490 aaPredicted RBP20.3■□□□□ 0.84
CNOT1-215ENST00000569020 TECPR2O15040 1411 aa20.28■□□□□ 0.84
CNOT1-215ENST00000569020 STK26Q9P289 416 aa20.28■□□□□ 0.84
CNOT1-215ENST00000569020 PIK3C2GO75747 1445 aa20.27■□□□□ 0.84
CNOT1-215ENST00000569020 LRPPRCP42704 1394 aaKnown RBP20.27■□□□□ 0.84
CNOT1-215ENST00000569020 ESCO1Q5FWF5 840 aa20.27■□□□□ 0.84
CNOT1-215ENST00000569020 COL22A1Q8NFW1 1626 aaPredicted RBP20.27■□□□□ 0.83
CNOT1-215ENST00000569020 ADAMTS2O95450 1211 aa20.26■□□□□ 0.83
CNOT1-215ENST00000569020 NGLY1Q96IV0 654 aa20.26■□□□□ 0.83
CNOT1-215ENST00000569020 NPHP3Q7Z494 1330 aa20.26■□□□□ 0.83
CNOT1-215ENST00000569020 ABCC11Q96J66 1382 aa20.25■□□□□ 0.83
CNOT1-215ENST00000569020 TMEM132EQ6IEE7 984 aa20.25■□□□□ 0.83
CNOT1-215ENST00000569020 WAPLQ7Z5K2 1190 aa20.25■□□□□ 0.83
CNOT1-215ENST00000569020 UPF1Q92900 1129 aaKnown RBP eCLIP20.25■□□□□ 0.83
CNOT1-215ENST00000569020 QTRT2Q9H974 415 aaKnown RBP20.25■□□□□ 0.83
CNOT1-215ENST00000569020 RBM6P78332 1123 aaKnown RBP20.23■□□□□ 0.83
CNOT1-215ENST00000569020 FMN2Q9NZ56 1722 aa20.23■□□□□ 0.83
CNOT1-215ENST00000569020 MARF1Q9Y4F3 1742 aaKnown RBP20.23■□□□□ 0.83
CNOT1-215ENST00000569020 YTHDC2Q9H6S0 1430 aaKnown RBP20.22■□□□□ 0.83
CNOT1-215ENST00000569020 NUTM2FA1L443 756 aa20.21■□□□□ 0.83
CNOT1-215ENST00000569020 PXDNQ92626 1479 aa20.21■□□□□ 0.83
CNOT1-215ENST00000569020 PLEKHH1Q9ULM0 1364 aa20.21■□□□□ 0.83
CNOT1-215ENST00000569020 KIF1AQ12756 1690 aa20.2■□□□□ 0.82
CNOT1-215ENST00000569020 MYOM2P54296 1465 aa20.2■□□□□ 0.82
CNOT1-215ENST00000569020 FOXO3O43524 673 aa20.2■□□□□ 0.82
CNOT1-215ENST00000569020 RGS12O14924 1447 aa20.19■□□□□ 0.82
CNOT1-215ENST00000569020 C14orf93Q9H972 538 aaKnown RBP20.19■□□□□ 0.82
CNOT1-215ENST00000569020 USP21Q9UK80 565 aa20.19■□□□□ 0.82
CNOT1-215ENST00000569020 RGPD8O14715 1765 aaPredicted RBP20.18■□□□□ 0.82
CNOT1-215ENST00000569020 NRXN1Q9ULB1 1477 aa20.18■□□□□ 0.82
CNOT1-215ENST00000569020 SIRT1Q96EB6 747 aa20.18■□□□□ 0.82
CNOT1-215ENST00000569020 DHX57Q6P158 1386 aaKnown RBP20.18■□□□□ 0.82
CNOT1-215ENST00000569020 RAB3GAP2Q9H2M9 1393 aa20.18■□□□□ 0.82
CNOT1-215ENST00000569020 MSH5O43196 834 aa20.17■□□□□ 0.82
CNOT1-215ENST00000569020 XPCQ01831 940 aaPredicted RBP20.17■□□□□ 0.82
CNOT1-215ENST00000569020 TRPC5Q9UL62 973 aaPredicted RBP20.17■□□□□ 0.82
CNOT1-215ENST00000569020 CFAP70Q5T0N1 1121 aa20.15■□□□□ 0.82
CNOT1-215ENST00000569020 FNBP4Q8N3X1 1017 aaPredicted RBP20.15■□□□□ 0.82
CNOT1-215ENST00000569020 ATRNO75882 1429 aa20.1■□□□□ 0.81
CNOT1-215ENST00000569020 DLC1Q96QB1 1528 aa20.1■□□□□ 0.81
CNOT1-215ENST00000569020 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.1■□□□□ 0.81
CNOT1-215ENST00000569020 SPATA31A3Q5VYP0 1347 aa20.09■□□□□ 0.81
CNOT1-215ENST00000569020 KRT28Q7Z3Y7 464 aa20.09■□□□□ 0.81
CNOT1-215ENST00000569020 PRAM1Q96QH2 718 aa20.09■□□□□ 0.81
CNOT1-215ENST00000569020 SAFB2Q14151 953 aaKnown RBP eCLIP20.08■□□□□ 0.81
CNOT1-215ENST00000569020 POGKQ9P215 609 aa20.08■□□□□ 0.81
CNOT1-215ENST00000569020 PHF8Q9UPP1 1060 aa20.08■□□□□ 0.81
CNOT1-215ENST00000569020 ATAD2Q6PL18 1390 aa20.08■□□□□ 0.8
CNOT1-215ENST00000569020 BCL9LQ86UU0 1499 aa20.07■□□□□ 0.8
CNOT1-215ENST00000569020 PSME1Q06323 249 aa20.07■□□□□ 0.8
CNOT1-215ENST00000569020 USP32Q8NFA0 1604 aa20.05■□□□□ 0.8
CNOT1-215ENST00000569020 ADGRB1O14514 1584 aa20.05■□□□□ 0.8
CNOT1-215ENST00000569020 ADGRB2O60241 1585 aa20.05■□□□□ 0.8
CNOT1-215ENST00000569020 TNS3Q68CZ2 1445 aa20.04■□□□□ 0.8
CNOT1-215ENST00000569020 HAP1P54257 671 aaPredicted RBP20.04■□□□□ 0.8
CNOT1-215ENST00000569020 ANKARQ7Z5J8 1434 aa20.03■□□□□ 0.8
CNOT1-215ENST00000569020 DCAF11Q8TEB1 546 aa20.03■□□□□ 0.8
CNOT1-215ENST00000569020 GJD4Q96KN9 370 aaPredicted RBP20.03■□□□□ 0.8
CNOT1-215ENST00000569020 KDM2AQ9Y2K7 1162 aa20.03■□□□□ 0.8
CNOT1-215ENST00000569020 HRCP23327 699 aa20.02■□□□□ 0.8
CNOT1-215ENST00000569020 STAC3Q96MF2 364 aa20.02■□□□□ 0.8
CNOT1-215ENST00000569020 TRAK1Q9UPV9 953 aa20.02■□□□□ 0.8
CNOT1-215ENST00000569020 ABCA3Q99758 1704 aa20.02■□□□□ 0.79
CNOT1-215ENST00000569020 SLIT2O94813 1529 aa20.02■□□□□ 0.79
CNOT1-215ENST00000569020 SBNO1A3KN83 1393 aa20.01■□□□□ 0.79
CNOT1-215ENST00000569020 UNC5CLQ8IV45 518 aa20■□□□□ 0.79
CNOT1-215ENST00000569020 PLCH1Q4KWH8 1693 aa20■□□□□ 0.79
CNOT1-215ENST00000569020 ARHGEF10O15013 1369 aa19.99■□□□□ 0.79
CNOT1-215ENST00000569020 EIF3AQ14152 1382 aaKnown RBP19.99■□□□□ 0.79
CNOT1-215ENST00000569020 LMOD2Q6P5Q4 547 aa19.99■□□□□ 0.79
CNOT1-215ENST00000569020 PMFBP1Q8TBY8 1022 aa19.99■□□□□ 0.79
CNOT1-215ENST00000569020 NWD2Q9ULI1 1742 aa19.99■□□□□ 0.79
CNOT1-215ENST00000569020 GLI3P10071 1580 aa19.98■□□□□ 0.79
CNOT1-215ENST00000569020 MINK1Q8N4C8 1332 aaPredicted RBP19.98■□□□□ 0.79
CNOT1-215ENST00000569020 PLEKHG5O94827 1062 aa19.97■□□□□ 0.79
CNOT1-215ENST00000569020 CABLES1Q8TDN4 633 aa19.97■□□□□ 0.79
CNOT1-215ENST00000569020 HIRIP3Q9BW71 556 aaPredicted RBP19.97■□□□□ 0.79
CNOT1-215ENST00000569020 TULP4Q9NRJ4 1543 aa19.97■□□□□ 0.79
CNOT1-215ENST00000569020 ARHGEF28Q8N1W1 1705 aaKnown RBP19.96■□□□□ 0.79
CNOT1-215ENST00000569020 TRPM3Q9HCF6 1732 aaPredicted RBP19.96■□□□□ 0.79
CNOT1-215ENST00000569020 RALGAPBQ86X10 1494 aa19.96■□□□□ 0.79
CNOT1-215ENST00000569020 ITSN1Q15811 1721 aa19.95■□□□□ 0.78
CNOT1-215ENST00000569020 BRWD3Q6RI45 1802 aa19.95■□□□□ 0.78
CNOT1-215ENST00000569020 GPRASP1Q5JY77 1395 aa19.95■□□□□ 0.78
CNOT1-215ENST00000569020 CCDC125Q86Z20 511 aa19.94■□□□□ 0.78
CNOT1-215ENST00000569020 ALS2Q96Q42 1657 aa19.94■□□□□ 0.78
CNOT1-215ENST00000569020 WASLO00401 505 aaPredicted RBP19.93■□□□□ 0.78
CNOT1-215ENST00000569020 VPS72Q15906 364 aa19.91■□□□□ 0.78
CNOT1-215ENST00000569020 PRR36Q9H6K5 1346 aa19.91■□□□□ 0.78
CNOT1-215ENST00000569020 CCDC9Q9Y3X0 531 aaKnown RBP19.9■□□□□ 0.78
CNOT1-215ENST00000569020 KIAA1210Q9ULL0 1709 aa19.9■□□□□ 0.78
CNOT1-215ENST00000569020 COL14A1Q05707 1796 aaKnown RBP19.88■□□□□ 0.77
CNOT1-215ENST00000569020 NGDNQ8NEJ9 315 aaKnown RBP19.88■□□□□ 0.77
CNOT1-215ENST00000569020 NRAPQ86VF7 1730 aa19.88■□□□□ 0.77
CNOT1-215ENST00000569020 FAM83GA6ND36 823 aa19.87■□□□□ 0.77
CNOT1-215ENST00000569020 CRYBG1Q9Y4K1 1723 aa19.87■□□□□ 0.77
CNOT1-215ENST00000569020 SEPT12Q8IYM1 358 aa19.86■□□□□ 0.77
CNOT1-215ENST00000569020 PAK3O75914 559 aaPredicted RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms