RNA–Protein interactions for RNA: ENST00000568922.1

GGA2-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-213ENST00000568922 PLEKHH1Q9ULM0 1364 aa17.28■□□□□ 0.36
GGA2-213ENST00000568922 PTPRUQ92729 1446 aa17.28■□□□□ 0.36
GGA2-213ENST00000568922 XRN1Q8IZH2 1706 aaKnown RBP17.28■□□□□ 0.36
GGA2-213ENST00000568922 WAPLQ7Z5K2 1190 aa17.28■□□□□ 0.36
GGA2-213ENST00000568922 KTN1Q86UP2 1357 aaKnown RBP17.27■□□□□ 0.36
GGA2-213ENST00000568922 NPHP4O75161 1426 aaPredicted RBP17.27■□□□□ 0.35
GGA2-213ENST00000568922 PTCH1Q13635 1447 aa17.27■□□□□ 0.35
GGA2-213ENST00000568922 ROBO2Q9HCK4 1378 aa17.26■□□□□ 0.35
GGA2-213ENST00000568922 ATAD2Q6PL18 1390 aa17.25■□□□□ 0.35
GGA2-213ENST00000568922 NINLQ9Y2I6 1382 aa17.25■□□□□ 0.35
GGA2-213ENST00000568922 AMOTL2Q9Y2J4 779 aa17.25■□□□□ 0.35
GGA2-213ENST00000568922 CHD2O14647 1828 aaKnown RBP17.25■□□□□ 0.35
GGA2-213ENST00000568922 SRPK2P78362 688 aaKnown RBP17.24■□□□□ 0.35
GGA2-213ENST00000568922 ADGRB2O60241 1585 aa17.24■□□□□ 0.35
GGA2-213ENST00000568922 CABP2Q9NPB3 220 aa17.24■□□□□ 0.35
GGA2-213ENST00000568922 RALBP1Q15311 655 aa17.23■□□□□ 0.35
GGA2-213ENST00000568922 KNSTRNQ9Y448 316 aa17.23■□□□□ 0.35
GGA2-213ENST00000568922 CDK19Q9BWU1 502 aa17.22■□□□□ 0.35
GGA2-213ENST00000568922 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.22■□□□□ 0.35
GGA2-213ENST00000568922 TMC1Q8TDI8 760 aa17.21■□□□□ 0.35
GGA2-213ENST00000568922 NCKAP5LQ9HCH0 1330 aa17.21■□□□□ 0.35
GGA2-213ENST00000568922 WASLO00401 505 aaPredicted RBP17.2■□□□□ 0.34
GGA2-213ENST00000568922 SLC12A5Q9H2X9 1139 aa17.2■□□□□ 0.34
GGA2-213ENST00000568922 PARD3Q8TEW0 1356 aa17.19■□□□□ 0.34
GGA2-213ENST00000568922 NPC1L1Q9UHC9 1359 aa17.19■□□□□ 0.34
GGA2-213ENST00000568922 ANKRD36BQ8N2N9 1353 aa17.19■□□□□ 0.34
GGA2-213ENST00000568922 USP32Q8NFA0 1604 aa17.18■□□□□ 0.34
GGA2-213ENST00000568922 LMTK3Q96Q04 1460 aa17.17■□□□□ 0.34
GGA2-213ENST00000568922 CNGB1Q14028 1251 aaPredicted RBP17.17■□□□□ 0.34
GGA2-213ENST00000568922 KCNA6P17658 529 aa17.17■□□□□ 0.34
GGA2-213ENST00000568922 AMER1Q5JTC6 1135 aaPredicted RBP17.17■□□□□ 0.34
GGA2-213ENST00000568922 MYBBP1AQ9BQG0 1328 aaKnown RBP17.16■□□□□ 0.34
GGA2-213ENST00000568922 NWD1Q149M9 1564 aa17.16■□□□□ 0.34
GGA2-213ENST00000568922 CC2D1BQ5T0F9 858 aaKnown RBP17.16■□□□□ 0.34
GGA2-213ENST00000568922 CARD14Q9BXL6 1004 aa17.16■□□□□ 0.34
GGA2-213ENST00000568922 NSD3Q9BZ95 1437 aa17.15■□□□□ 0.34
GGA2-213ENST00000568922 TERF2IPQ9NYB0 399 aa17.14■□□□□ 0.34
GGA2-213ENST00000568922 ATP7BP35670 1465 aa17.14■□□□□ 0.33
GGA2-213ENST00000568922 YTHDC1Q96MU7 727 aaKnown RBP17.14■□□□□ 0.33
GGA2-213ENST00000568922 MRS2Q9HD23 443 aa17.13■□□□□ 0.33
GGA2-213ENST00000568922 A0A1W2PP64 1363 aa17.12■□□□□ 0.33
GGA2-213ENST00000568922 CD163L1Q9NR16 1453 aa17.12■□□□□ 0.33
GGA2-213ENST00000568922 TOPAZ1Q8N9V7 1692 aa17.12■□□□□ 0.33
GGA2-213ENST00000568922 HSPA2P54652 639 aa17.12■□□□□ 0.33
GGA2-213ENST00000568922 HDGFL2Q7Z4V5 671 aaPredicted RBP17.12■□□□□ 0.33
GGA2-213ENST00000568922 NUDT16Q96DE0 195 aaKnown RBP17.12■□□□□ 0.33
GGA2-213ENST00000568922 CCDC184Q52MB2 194 aa17.11■□□□□ 0.33
GGA2-213ENST00000568922 CABP1Q9NZU7 370 aa17.11■□□□□ 0.33
GGA2-213ENST00000568922 CCDC61Q9Y6R9 512 aa17.11■□□□□ 0.33
GGA2-213ENST00000568922 BRD4O60885 1362 aaPredicted RBP17.11■□□□□ 0.33
GGA2-213ENST00000568922 PPIP5K1Q6PFW1 1433 aa17.11■□□□□ 0.33
GGA2-213ENST00000568922 ITSN1Q15811 1721 aa17.11■□□□□ 0.33
GGA2-213ENST00000568922 STRCQ7RTU9 1775 aa17.1■□□□□ 0.33
GGA2-213ENST00000568922 NLRP13Q86W25 1043 aa17.1■□□□□ 0.33
GGA2-213ENST00000568922 NALCNQ8IZF0 1738 aa17.1■□□□□ 0.33
GGA2-213ENST00000568922 NSD2O96028 1365 aa17.1■□□□□ 0.33
GGA2-213ENST00000568922 CGNL1Q0VF96 1302 aa17.1■□□□□ 0.33
GGA2-213ENST00000568922 CDC42BPGQ6DT37 1551 aa17.09■□□□□ 0.33
GGA2-213ENST00000568922 AKAP12Q02952 1782 aa17.09■□□□□ 0.33
GGA2-213ENST00000568922 NKTRP30414 1462 aaKnown RBP17.08■□□□□ 0.33
GGA2-213ENST00000568922 FMN2Q9NZ56 1722 aa17.08■□□□□ 0.33
GGA2-213ENST00000568922 PRR36Q9H6K5 1346 aa17.08■□□□□ 0.32
GGA2-213ENST00000568922 MON2Q7Z3U7 1717 aa17.07■□□□□ 0.32
GGA2-213ENST00000568922 CPSF1Q10570 1443 aaKnown RBP17.07■□□□□ 0.32
GGA2-213ENST00000568922 ANKRD26Q9UPS8 1709 aa17.07■□□□□ 0.32
GGA2-213ENST00000568922 ANKARQ7Z5J8 1434 aa17.06■□□□□ 0.32
GGA2-213ENST00000568922 ADGRL3Q9HAR2 1447 aa17.06■□□□□ 0.32
GGA2-213ENST00000568922 KIF20BQ96Q89 1820 aa17.06■□□□□ 0.32
GGA2-213ENST00000568922 CENPBP07199 599 aaPredicted RBP17.05■□□□□ 0.32
GGA2-213ENST00000568922 RGPD8O14715 1765 aaPredicted RBP17.04■□□□□ 0.32
GGA2-213ENST00000568922 EDC4Q6P2E9 1401 aaKnown RBP17.03■□□□□ 0.32
GGA2-213ENST00000568922 PLEKHG3A1L390 1219 aa17.03■□□□□ 0.32
GGA2-213ENST00000568922 PPP2R1AP30153 589 aa17.03■□□□□ 0.32
GGA2-213ENST00000568922 ZNF692Q9BU19 519 aaPredicted RBP17.03■□□□□ 0.32
GGA2-213ENST00000568922 STRCP1A6NGW2 1772 aa17.03■□□□□ 0.32
GGA2-213ENST00000568922 MORC1Q86VD1 984 aa17.03■□□□□ 0.32
GGA2-213ENST00000568922 PROSER2Q86WR7 435 aaPredicted RBP17.01■□□□□ 0.31
GGA2-213ENST00000568922 FAM9BQ8IZU0 186 aa17.01■□□□□ 0.31
GGA2-213ENST00000568922 NUTM2FA1L443 756 aa17■□□□□ 0.31
GGA2-213ENST00000568922 PNISRQ8TF01 805 aaKnown RBP17■□□□□ 0.31
GGA2-213ENST00000568922 NCOA3Q9Y6Q9 1424 aa17■□□□□ 0.31
GGA2-213ENST00000568922 NRKQ7Z2Y5 1582 aa17■□□□□ 0.31
GGA2-213ENST00000568922 FYB1O15117 783 aa16.99■□□□□ 0.31
GGA2-213ENST00000568922 C14orf37Q86TY3 774 aa16.98■□□□□ 0.31
GGA2-213ENST00000568922 ACEP12821 1306 aa16.98■□□□□ 0.31
GGA2-213ENST00000568922 RBM33Q96EV2 1170 aaKnown RBP16.98■□□□□ 0.31
GGA2-213ENST00000568922 POLR3AO14802 1390 aaPredicted RBP16.97■□□□□ 0.31
GGA2-213ENST00000568922 GGNBP2Q9H3C7 697 aa16.96■□□□□ 0.31
GGA2-213ENST00000568922 USP6P35125 1406 aa16.96■□□□□ 0.31
GGA2-213ENST00000568922 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.95■□□□□ 0.3
GGA2-213ENST00000568922 C19orf44Q9H6X5 657 aa16.95■□□□□ 0.3
GGA2-213ENST00000568922 DMRT2Q9Y5R5 561 aa16.95■□□□□ 0.3
GGA2-213ENST00000568922 NGDNQ8NEJ9 315 aaKnown RBP16.93■□□□□ 0.3
GGA2-213ENST00000568922 PMFBP1Q8TBY8 1022 aa16.93■□□□□ 0.3
GGA2-213ENST00000568922 TMEM94Q12767 1356 aa16.93■□□□□ 0.3
GGA2-213ENST00000568922 DCCP43146 1447 aa16.93■□□□□ 0.3
GGA2-213ENST00000568922 HNRNPUQ00839 825 aaKnown RBP eCLIP16.93■□□□□ 0.3
GGA2-213ENST00000568922 INSRP06213 1382 aa16.93■□□□□ 0.3
GGA2-213ENST00000568922 SSH2Q76I76 1423 aa16.92■□□□□ 0.3
GGA2-213ENST00000568922 TTC21BQ7Z4L5 1316 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms