RNA–Protein interactions for RNA: ENST00000568917.1

CNOT1-214, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-214ENST00000568917 ADGRF5Q8IZF2 1346 aa12.99□□□□□ -0.33
CNOT1-214ENST00000568917 C11orf95C9JLR9 678 aaPredicted RBP12.99□□□□□ -0.33
CNOT1-214ENST00000568917 CCER2I3L3R5 266 aa12.99□□□□□ -0.33
CNOT1-214ENST00000568917 SPOCK2Q92563 424 aa12.99□□□□□ -0.33
CNOT1-214ENST00000568917 MYO5BQ9ULV0 1848 aa12.99□□□□□ -0.33
CNOT1-214ENST00000568917 CHGAP10645 457 aaKnown RBP12.98□□□□□ -0.33
CNOT1-214ENST00000568917 C14orf93Q9H972 538 aaKnown RBP12.98□□□□□ -0.33
CNOT1-214ENST00000568917 SBNO2Q9Y2G9 1366 aa12.97□□□□□ -0.33
CNOT1-214ENST00000568917 ADGRB1O14514 1584 aa12.96□□□□□ -0.33
CNOT1-214ENST00000568917 CDCA8Q53HL2 280 aa12.96□□□□□ -0.33
CNOT1-214ENST00000568917 FAM212AQ96EL1 285 aa12.96□□□□□ -0.33
CNOT1-214ENST00000568917 TESK2Q96S53 571 aa12.96□□□□□ -0.33
CNOT1-214ENST00000568917 FER1L4A9Z1Z3 1794 aa12.96□□□□□ -0.33
CNOT1-214ENST00000568917 A2ML1A8K2U0 1454 aa12.96□□□□□ -0.33
CNOT1-214ENST00000568917 NLRP1Q9C000 1473 aa12.96□□□□□ -0.33
CNOT1-214ENST00000568917 TMF1P82094 1093 aa12.95□□□□□ -0.34
CNOT1-214ENST00000568917 MLECQ14165 292 aa12.95□□□□□ -0.34
CNOT1-214ENST00000568917 FBXO31Q5XUX0 539 aaPredicted RBP12.95□□□□□ -0.34
CNOT1-214ENST00000568917 TNRQ92752 1358 aa12.94□□□□□ -0.34
CNOT1-214ENST00000568917 CFAP70Q5T0N1 1121 aa12.93□□□□□ -0.34
CNOT1-214ENST00000568917 DCAF8Q5TAQ9 597 aa12.93□□□□□ -0.34
CNOT1-214ENST00000568917 KTN1Q86UP2 1357 aaKnown RBP12.93□□□□□ -0.34
CNOT1-214ENST00000568917 C3P01024 1663 aa12.93□□□□□ -0.34
CNOT1-214ENST00000568917 HDGFP51858 240 aaKnown RBP12.92□□□□□ -0.34
CNOT1-214ENST00000568917 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.91□□□□□ -0.34
CNOT1-214ENST00000568917 KIF12Q96FN5 646 aa12.91□□□□□ -0.34
CNOT1-214ENST00000568917 UBR1Q8IWV7 1749 aa12.91□□□□□ -0.34
CNOT1-214ENST00000568917 CENPBP07199 599 aaPredicted RBP12.9□□□□□ -0.34
CNOT1-214ENST00000568917 CLCN6P51797 869 aa12.9□□□□□ -0.34
CNOT1-214ENST00000568917 GALR2O43603 387 aaPredicted RBP12.89□□□□□ -0.35
CNOT1-214ENST00000568917 RIMS2Q9UQ26 1411 aa12.89□□□□□ -0.35
CNOT1-214ENST00000568917 ARHGEF28Q8N1W1 1705 aaKnown RBP12.89□□□□□ -0.35
CNOT1-214ENST00000568917 PUS7Q96PZ0 661 aaKnown RBP12.88□□□□□ -0.35
CNOT1-214ENST00000568917 DISP3Q9P2K9 1392 aa12.88□□□□□ -0.35
CNOT1-214ENST00000568917 ALKQ9UM73 1620 aa12.88□□□□□ -0.35
CNOT1-214ENST00000568917 QRICH2Q9H0J4 1663 aa12.88□□□□□ -0.35
CNOT1-214ENST00000568917 PRKRIP1Q9H875 184 aaPredicted RBP12.88□□□□□ -0.35
CNOT1-214ENST00000568917 SETD1AO15047 1707 aaKnown RBP12.87□□□□□ -0.35
CNOT1-214ENST00000568917 ADAMTSL3P82987 1691 aa12.86□□□□□ -0.35
CNOT1-214ENST00000568917 CENPJQ9HC77 1338 aaPredicted RBP12.86□□□□□ -0.35
CNOT1-214ENST00000568917 ASXL1Q8IXJ9 1541 aa12.86□□□□□ -0.35
CNOT1-214ENST00000568917 DLC1Q96QB1 1528 aa12.86□□□□□ -0.35
CNOT1-214ENST00000568917 MAP3K13O43283 966 aa12.86□□□□□ -0.35
CNOT1-214ENST00000568917 GSE1Q14687 1217 aa12.86□□□□□ -0.35
CNOT1-214ENST00000568917 MS4A3Q96HJ5 214 aa12.86□□□□□ -0.35
CNOT1-214ENST00000568917 TMEM2Q9UHN6 1383 aa12.85□□□□□ -0.35
CNOT1-214ENST00000568917 SLIT1O75093 1534 aa12.85□□□□□ -0.35
CNOT1-214ENST00000568917 RTN4Q9NQC3 1192 aaKnown RBP12.84□□□□□ -0.35
CNOT1-214ENST00000568917 NRXN3Q9Y4C0 1643 aa12.84□□□□□ -0.35
CNOT1-214ENST00000568917 MYOM1P52179 1685 aa12.83□□□□□ -0.36
CNOT1-214ENST00000568917 YTHDC2Q9H6S0 1430 aaKnown RBP12.83□□□□□ -0.36
CNOT1-214ENST00000568917 PYGBP11216 843 aa12.83□□□□□ -0.36
CNOT1-214ENST00000568917 RALBP1Q15311 655 aa12.83□□□□□ -0.36
CNOT1-214ENST00000568917 POLR3GLQ9BT43 218 aa12.83□□□□□ -0.36
CNOT1-214ENST00000568917 ARHGAP23Q9P227 1491 aa12.83□□□□□ -0.36
CNOT1-214ENST00000568917 KNDC1Q76NI1 1749 aa12.82□□□□□ -0.36
CNOT1-214ENST00000568917 CIZ1Q9ULV3 898 aaPredicted RBP12.82□□□□□ -0.36
CNOT1-214ENST00000568917 RIMS1Q86UR5 1692 aaKnown RBP12.81□□□□□ -0.36
CNOT1-214ENST00000568917 PTPRMP28827 1452 aa12.81□□□□□ -0.36
CNOT1-214ENST00000568917 SETD1BQ9UPS6 1966 aaKnown RBP12.81□□□□□ -0.36
CNOT1-214ENST00000568917 PER1O15534 1290 aaPredicted RBP12.81□□□□□ -0.36
CNOT1-214ENST00000568917 TRAK1Q9UPV9 953 aa12.81□□□□□ -0.36
CNOT1-214ENST00000568917 LRPPRCP42704 1394 aaKnown RBP12.8□□□□□ -0.36
CNOT1-214ENST00000568917 ABCC11Q96J66 1382 aa12.8□□□□□ -0.36
CNOT1-214ENST00000568917 NPC1L1Q9UHC9 1359 aa12.8□□□□□ -0.36
CNOT1-214ENST00000568917 PLEKHG1Q9ULL1 1385 aa12.8□□□□□ -0.36
CNOT1-214ENST00000568917 ZNF142P52746 1687 aaPredicted RBP12.8□□□□□ -0.36
CNOT1-214ENST00000568917 POTEIP0CG38 1075 aa12.8□□□□□ -0.36
CNOT1-214ENST00000568917 AMER1Q5JTC6 1135 aaPredicted RBP12.8□□□□□ -0.36
CNOT1-214ENST00000568917 TMEM132EQ6IEE7 984 aa12.8□□□□□ -0.36
CNOT1-214ENST00000568917 SIRT1Q96EB6 747 aa12.8□□□□□ -0.36
CNOT1-214ENST00000568917 NINLQ9Y2I6 1382 aa12.8□□□□□ -0.36
CNOT1-214ENST00000568917 DIP2AQ14689 1571 aa12.79□□□□□ -0.36
CNOT1-214ENST00000568917 NUTM2DQ5VT03 806 aaPredicted RBP12.79□□□□□ -0.36
CNOT1-214ENST00000568917 EVC2Q86UK5 1308 aa12.79□□□□□ -0.36
CNOT1-214ENST00000568917 TECPR2O15040 1411 aa12.79□□□□□ -0.36
CNOT1-214ENST00000568917 CEP170BQ9Y4F5 1589 aaPredicted RBP12.78□□□□□ -0.36
CNOT1-214ENST00000568917 THEMISQ8N1K5 641 aaPredicted RBP12.78□□□□□ -0.36
CNOT1-214ENST00000568917 PARD3Q8TEW0 1356 aa12.78□□□□□ -0.36
CNOT1-214ENST00000568917 PANK3Q9H999 370 aa12.77□□□□□ -0.37
CNOT1-214ENST00000568917 EID1Q9Y6B2 187 aa12.77□□□□□ -0.37
CNOT1-214ENST00000568917 FAM135BQ49AJ0 1406 aa12.77□□□□□ -0.37
CNOT1-214ENST00000568917 CPS1P31327 1500 aa12.77□□□□□ -0.37
CNOT1-214ENST00000568917 MED14O60244 1454 aa12.76□□□□□ -0.37
CNOT1-214ENST00000568917 CHRM1P11229 460 aaPredicted RBP12.76□□□□□ -0.37
CNOT1-214ENST00000568917 CEBPAP49715 358 aaPredicted RBP12.76□□□□□ -0.37
CNOT1-214ENST00000568917 MYBBP1AQ9BQG0 1328 aaKnown RBP12.76□□□□□ -0.37
CNOT1-214ENST00000568917 SGIP1Q9BQI5 828 aa12.76□□□□□ -0.37
CNOT1-214ENST00000568917 TRPC6Q9Y210 931 aa12.76□□□□□ -0.37
CNOT1-214ENST00000568917 PCDHB13Q9Y5F0 798 aa12.76□□□□□ -0.37
CNOT1-214ENST00000568917 USP32Q8NFA0 1604 aa12.75□□□□□ -0.37
CNOT1-214ENST00000568917 TULP4Q9NRJ4 1543 aa12.75□□□□□ -0.37
CNOT1-214ENST00000568917 BRD4O60885 1362 aaPredicted RBP12.75□□□□□ -0.37
CNOT1-214ENST00000568917 YTHDC1Q96MU7 727 aaKnown RBP12.75□□□□□ -0.37
CNOT1-214ENST00000568917 ADAMTS13Q76LX8 1427 aa12.74□□□□□ -0.37
CNOT1-214ENST00000568917 ATAD2Q6PL18 1390 aa12.74□□□□□ -0.37
CNOT1-214ENST00000568917 IFNL1Q8IU54 200 aa12.74□□□□□ -0.37
CNOT1-214ENST00000568917 KNSTRNQ9Y448 316 aa12.74□□□□□ -0.37
CNOT1-214ENST00000568917 TXNDC2Q86VQ3 553 aa12.72□□□□□ -0.37
CNOT1-214ENST00000568917 NLRP13Q86W25 1043 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms