RNA–Protein interactions for RNA: ENST00000568896.1

SYNGR3-205, Transcript of synaptogyrin 3, humanhuman

TSL 5

Gene SYNGR3, Length 533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-205ENST00000568896 IFT172Q9UG01 1749 aa26.79■■□□□ 1.88
SYNGR3-205ENST00000568896 SOS2Q07890 1332 aaPredicted RBP26.78■■□□□ 1.88
SYNGR3-205ENST00000568896 NGLY1Q96IV0 654 aa26.77■■□□□ 1.88
SYNGR3-205ENST00000568896 CDK12Q9NYV4 1490 aaPredicted RBP26.76■■□□□ 1.87
SYNGR3-205ENST00000568896 ADGRF5Q8IZF2 1346 aa26.75■■□□□ 1.87
SYNGR3-205ENST00000568896 RBM6P78332 1123 aaKnown RBP26.75■■□□□ 1.87
SYNGR3-205ENST00000568896 PRAG1Q86YV5 1406 aa26.73■■□□□ 1.87
SYNGR3-205ENST00000568896 RGS12O14924 1447 aa26.72■■□□□ 1.87
SYNGR3-205ENST00000568896 STK26Q9P289 416 aa26.71■■□□□ 1.87
SYNGR3-205ENST00000568896 DHX57Q6P158 1386 aaKnown RBP26.71■■□□□ 1.87
SYNGR3-205ENST00000568896 ESCO1Q5FWF5 840 aa26.7■■□□□ 1.86
SYNGR3-205ENST00000568896 MYOM2P54296 1465 aa26.69■■□□□ 1.86
SYNGR3-205ENST00000568896 LAMC1P11047 1609 aa26.69■■□□□ 1.86
SYNGR3-205ENST00000568896 WAPLQ7Z5K2 1190 aa26.69■■□□□ 1.86
SYNGR3-205ENST00000568896 PIK3C2GO75747 1445 aa26.67■■□□□ 1.86
SYNGR3-205ENST00000568896 USP21Q9UK80 565 aa26.67■■□□□ 1.86
SYNGR3-205ENST00000568896 NUTM2FA1L443 756 aa26.66■■□□□ 1.86
SYNGR3-205ENST00000568896 XPCQ01831 940 aaPredicted RBP26.66■■□□□ 1.86
SYNGR3-205ENST00000568896 TMEM132EQ6IEE7 984 aa26.66■■□□□ 1.86
SYNGR3-205ENST00000568896 NRXN1Q9ULB1 1477 aa26.66■■□□□ 1.86
SYNGR3-205ENST00000568896 FOXO3O43524 673 aa26.64■■□□□ 1.86
SYNGR3-205ENST00000568896 FNBP4Q8N3X1 1017 aaPredicted RBP26.63■■□□□ 1.85
SYNGR3-205ENST00000568896 PLEKHH1Q9ULM0 1364 aa26.62■■□□□ 1.85
SYNGR3-205ENST00000568896 NPHP3Q7Z494 1330 aa26.62■■□□□ 1.85
SYNGR3-205ENST00000568896 PCGF6Q9BYE7 350 aa26.61■■□□□ 1.85
SYNGR3-205ENST00000568896 LRPPRCP42704 1394 aaKnown RBP26.6■■□□□ 1.85
SYNGR3-205ENST00000568896 TRPC5Q9UL62 973 aaPredicted RBP26.6■■□□□ 1.85
SYNGR3-205ENST00000568896 CDC42BPGQ6DT37 1551 aa26.58■■□□□ 1.85
SYNGR3-205ENST00000568896 PXDNQ92626 1479 aa26.58■■□□□ 1.85
SYNGR3-205ENST00000568896 DCAF11Q8TEB1 546 aa26.58■■□□□ 1.85
SYNGR3-205ENST00000568896 ABCC11Q96J66 1382 aa26.58■■□□□ 1.84
SYNGR3-205ENST00000568896 TECPR2O15040 1411 aa26.57■■□□□ 1.84
SYNGR3-205ENST00000568896 KDM2AQ9Y2K7 1162 aa26.56■■□□□ 1.84
SYNGR3-205ENST00000568896 SIN3AQ96ST3 1273 aa26.55■■□□□ 1.84
SYNGR3-205ENST00000568896 ATRNO75882 1429 aa26.55■■□□□ 1.84
SYNGR3-205ENST00000568896 COL22A1Q8NFW1 1626 aaPredicted RBP26.54■■□□□ 1.84
SYNGR3-205ENST00000568896 STAC3Q96MF2 364 aa26.54■■□□□ 1.84
SYNGR3-205ENST00000568896 C14orf93Q9H972 538 aaKnown RBP26.54■■□□□ 1.84
SYNGR3-205ENST00000568896 CFAP70Q5T0N1 1121 aa26.52■■□□□ 1.84
SYNGR3-205ENST00000568896 BCL9LQ86UU0 1499 aa26.51■■□□□ 1.83
SYNGR3-205ENST00000568896 YTHDC2Q9H6S0 1430 aaKnown RBP26.51■■□□□ 1.83
SYNGR3-205ENST00000568896 ATAD2Q6PL18 1390 aa26.5■■□□□ 1.83
SYNGR3-205ENST00000568896 NEUROD1Q13562 356 aa26.48■■□□□ 1.83
SYNGR3-205ENST00000568896 KRT28Q7Z3Y7 464 aa26.47■■□□□ 1.83
SYNGR3-205ENST00000568896 SPATA31A3Q5VYP0 1347 aa26.46■■□□□ 1.83
SYNGR3-205ENST00000568896 SIRT1Q96EB6 747 aa26.46■■□□□ 1.83
SYNGR3-205ENST00000568896 KNDC1Q76NI1 1749 aa26.45■■□□□ 1.83
SYNGR3-205ENST00000568896 GJD4Q96KN9 370 aaPredicted RBP26.45■■□□□ 1.82
SYNGR3-205ENST00000568896 ADGRB1O14514 1584 aa26.45■■□□□ 1.82
SYNGR3-205ENST00000568896 SAFB2Q14151 953 aaKnown RBP eCLIP26.43■■□□□ 1.82
SYNGR3-205ENST00000568896 L3MBTL2Q969R5 705 aa26.43■■□□□ 1.82
SYNGR3-205ENST00000568896 PLEKHG5O94827 1062 aa26.42■■□□□ 1.82
SYNGR3-205ENST00000568896 PHF8Q9UPP1 1060 aa26.42■■□□□ 1.82
SYNGR3-205ENST00000568896 FMN2Q9NZ56 1722 aa26.42■■□□□ 1.82
SYNGR3-205ENST00000568896 UNC5CLQ8IV45 518 aa26.41■■□□□ 1.82
SYNGR3-205ENST00000568896 CABLES1Q8TDN4 633 aa26.4■■□□□ 1.82
SYNGR3-205ENST00000568896 PRAM1Q96QH2 718 aa26.4■■□□□ 1.82
SYNGR3-205ENST00000568896 SRCAPQ6ZRS2 3230 aa26.4■■□□□ 1.82
SYNGR3-205ENST00000568896 EP400Q96L91 3159 aa26.37■■□□□ 1.81
SYNGR3-205ENST00000568896 MARF1Q9Y4F3 1742 aaKnown RBP26.36■■□□□ 1.81
SYNGR3-205ENST00000568896 SLIT2O94813 1529 aa26.36■■□□□ 1.81
SYNGR3-205ENST00000568896 KIAA1210Q9ULL0 1709 aa26.36■■□□□ 1.81
SYNGR3-205ENST00000568896 PSME1Q06323 249 aa26.35■■□□□ 1.81
SYNGR3-205ENST00000568896 KIF1AQ12756 1690 aa26.34■■□□□ 1.81
SYNGR3-205ENST00000568896 DLC1Q96QB1 1528 aa26.34■■□□□ 1.81
SYNGR3-205ENST00000568896 LMOD2Q6P5Q4 547 aa26.34■■□□□ 1.81
SYNGR3-205ENST00000568896 POGKQ9P215 609 aa26.34■■□□□ 1.81
SYNGR3-205ENST00000568896 RALGAPBQ86X10 1494 aa26.34■■□□□ 1.81
SYNGR3-205ENST00000568896 HAP1P54257 671 aaPredicted RBP26.33■■□□□ 1.81
SYNGR3-205ENST00000568896 PMFBP1Q8TBY8 1022 aa26.33■■□□□ 1.81
SYNGR3-205ENST00000568896 TNS3Q68CZ2 1445 aa26.32■■□□□ 1.8
SYNGR3-205ENST00000568896 TONSLQ96HA7 1378 aa26.32■■□□□ 1.8
SYNGR3-205ENST00000568896 RGPD8O14715 1765 aaPredicted RBP26.31■■□□□ 1.8
SYNGR3-205ENST00000568896 GLI3P10071 1580 aa26.3■■□□□ 1.8
SYNGR3-205ENST00000568896 CCDC125Q86Z20 511 aa26.3■■□□□ 1.8
SYNGR3-205ENST00000568896 HIRIP3Q9BW71 556 aaPredicted RBP26.29■■□□□ 1.8
SYNGR3-205ENST00000568896 ZRANB1Q9UGI0 708 aa26.29■■□□□ 1.8
SYNGR3-205ENST00000568896 TRAK1Q9UPV9 953 aa26.29■■□□□ 1.8
SYNGR3-205ENST00000568896 SBNO1A3KN83 1393 aa26.29■■□□□ 1.8
SYNGR3-205ENST00000568896 USP32Q8NFA0 1604 aa26.28■■□□□ 1.8
SYNGR3-205ENST00000568896 NBPF1Q3BBV0 1214 aa26.28■■□□□ 1.8
SYNGR3-205ENST00000568896 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.26■■□□□ 1.79
SYNGR3-205ENST00000568896 VPS72Q15906 364 aa26.26■■□□□ 1.79
SYNGR3-205ENST00000568896 SEPT12Q8IYM1 358 aa26.26■■□□□ 1.79
SYNGR3-205ENST00000568896 TRPM1Q7Z4N2 1603 aa26.25■■□□□ 1.79
SYNGR3-205ENST00000568896 CLSPNQ9HAW4 1339 aa26.25■■□□□ 1.79
SYNGR3-205ENST00000568896 FAM83GA6ND36 823 aa26.25■■□□□ 1.79
SYNGR3-205ENST00000568896 MINK1Q8N4C8 1332 aaPredicted RBP26.24■■□□□ 1.79
SYNGR3-205ENST00000568896 CCDC9Q9Y3X0 531 aaKnown RBP26.24■■□□□ 1.79
SYNGR3-205ENST00000568896 ARHGEF28Q8N1W1 1705 aaKnown RBP26.24■■□□□ 1.79
SYNGR3-205ENST00000568896 ARHGEF10O15013 1369 aa26.22■■□□□ 1.79
SYNGR3-205ENST00000568896 PRR36Q9H6K5 1346 aa26.22■■□□□ 1.79
SYNGR3-205ENST00000568896 ANKARQ7Z5J8 1434 aa26.22■■□□□ 1.79
SYNGR3-205ENST00000568896 NBPF8Q3BBV2 869 aa26.21■■□□□ 1.79
SYNGR3-205ENST00000568896 DEFB132Q7Z7B7 95 aa26.21■■□□□ 1.79
SYNGR3-205ENST00000568896 ONECUT3O60422 494 aaPredicted RBP26.2■■□□□ 1.78
SYNGR3-205ENST00000568896 BLMP54132 1417 aaPredicted RBP26.19■■□□□ 1.78
SYNGR3-205ENST00000568896 ADGRB2O60241 1585 aa26.19■■□□□ 1.78
SYNGR3-205ENST00000568896 WASLO00401 505 aaPredicted RBP26.17■■□□□ 1.78
SYNGR3-205ENST00000568896 CCER1Q8TC90 406 aaPredicted RBP26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms