RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 GSE1Q14687 1217 aa23.66■■□□□ 1.38
PKD1-235ENST00000568591 KIF1BO60333 1816 aa23.65■■□□□ 1.38
PKD1-235ENST00000568591 CGNL1Q0VF96 1302 aa23.65■■□□□ 1.38
PKD1-235ENST00000568591 BRPF3Q9ULD4 1205 aa23.65■■□□□ 1.38
PKD1-235ENST00000568591 CFAP65Q6ZU64 1925 aaKnown RBP23.65■■□□□ 1.38
PKD1-235ENST00000568591 IFT172Q9UG01 1749 aa23.64■■□□□ 1.38
PKD1-235ENST00000568591 NRXN1Q9ULB1 1477 aa23.64■■□□□ 1.37
PKD1-235ENST00000568591 SHPRHQ149N8 1683 aa23.64■■□□□ 1.37
PKD1-235ENST00000568591 MTHFSP49914 203 aa23.64■■□□□ 1.37
PKD1-235ENST00000568591 RARSP54136 660 aaKnown RBP23.64■■□□□ 1.37
PKD1-235ENST00000568591 NEURL4Q96JN8 1562 aa23.62■■□□□ 1.37
PKD1-235ENST00000568591 PCDHB15Q9Y5E8 787 aa23.62■■□□□ 1.37
PKD1-235ENST00000568591 GGT6Q6P531 493 aa23.62■■□□□ 1.37
PKD1-235ENST00000568591 RUNDC1Q96C34 613 aa23.62■■□□□ 1.37
PKD1-235ENST00000568591 SBNO2Q9Y2G9 1366 aa23.61■■□□□ 1.37
PKD1-235ENST00000568591 SLC24A1O60721 1099 aa23.6■■□□□ 1.37
PKD1-235ENST00000568591 MYO3AQ8NEV4 1616 aa23.6■■□□□ 1.37
PKD1-235ENST00000568591 KIDINS220Q9ULH0 1771 aa23.59■■□□□ 1.37
PKD1-235ENST00000568591 C14orf93Q9H972 538 aaKnown RBP23.59■■□□□ 1.37
PKD1-235ENST00000568591 ADGRB3O60242 1522 aa23.58■■□□□ 1.37
PKD1-235ENST00000568591 NPATQ14207 1427 aa23.58■■□□□ 1.37
PKD1-235ENST00000568591 IQSEC2Q5JU85 1478 aa23.57■■□□□ 1.36
PKD1-235ENST00000568591 NGEFQ8N5V2 710 aa23.57■■□□□ 1.36
PKD1-235ENST00000568591 PHF23Q9BUL5 403 aaPredicted RBP23.57■■□□□ 1.36
PKD1-235ENST00000568591 ASXL2Q76L83 1435 aa23.56■■□□□ 1.36
PKD1-235ENST00000568591 SAFB2Q14151 953 aaKnown RBP eCLIP23.56■■□□□ 1.36
PKD1-235ENST00000568591 ADGRB1O14514 1584 aa23.55■■□□□ 1.36
PKD1-235ENST00000568591 QRICH2Q9H0J4 1663 aa23.54■■□□□ 1.36
PKD1-235ENST00000568591 ZNF518AQ6AHZ1 1483 aa23.53■■□□□ 1.36
PKD1-235ENST00000568591 ANO8Q9HCE9 1232 aaPredicted RBP23.53■■□□□ 1.36
PKD1-235ENST00000568591 MAPK8IP3Q9UPT6 1336 aa23.52■■□□□ 1.36
PKD1-235ENST00000568591 CABP2Q9NPB3 220 aa23.52■■□□□ 1.36
PKD1-235ENST00000568591 U2AF1L5P0DN76 240 aaPredicted RBP23.52■■□□□ 1.35
PKD1-235ENST00000568591 U2AF1Q01081 240 aaKnown RBP eCLIP23.52■■□□□ 1.35
PKD1-235ENST00000568591 NINLQ9Y2I6 1382 aa23.51■■□□□ 1.35
PKD1-235ENST00000568591 SETBP1Q9Y6X0 1596 aa23.51■■□□□ 1.35
PKD1-235ENST00000568591 SLKQ9H2G2 1235 aaPredicted RBP23.51■■□□□ 1.35
PKD1-235ENST00000568591 PDZRN3Q9UPQ7 1066 aa23.51■■□□□ 1.35
PKD1-235ENST00000568591 NLRP1Q9C000 1473 aa23.51■■□□□ 1.35
PKD1-235ENST00000568591 TSR2Q969E8 191 aaKnown RBP23.51■■□□□ 1.35
PKD1-235ENST00000568591 ZC3H13Q5T200 1668 aaKnown RBP23.5■■□□□ 1.35
PKD1-235ENST00000568591 WDR63Q8IWG1 891 aa23.49■■□□□ 1.35
PKD1-235ENST00000568591 LMTK2Q8IWU2 1503 aa23.49■■□□□ 1.35
PKD1-235ENST00000568591 VIRMAQ69YN4 1812 aaKnown RBP23.49■■□□□ 1.35
PKD1-235ENST00000568591 PPLO60437 1756 aa23.47■■□□□ 1.35
PKD1-235ENST00000568591 CFAP53Q96M91 514 aa23.46■■□□□ 1.35
PKD1-235ENST00000568591 FRMPD1Q5SYB0 1578 aa23.46■■□□□ 1.35
PKD1-235ENST00000568591 PMFBP1Q8TBY8 1022 aa23.46■■□□□ 1.35
PKD1-235ENST00000568591 TULP4Q9NRJ4 1543 aa23.45■■□□□ 1.34
PKD1-235ENST00000568591 STK26Q9P289 416 aa23.43■■□□□ 1.34
PKD1-235ENST00000568591 CCDC27Q2M243 656 aa23.43■■□□□ 1.34
PKD1-235ENST00000568591 GGNBP2Q9H3C7 697 aa23.43■■□□□ 1.34
PKD1-235ENST00000568591 U2SURPO15042 1029 aaKnown RBP23.42■■□□□ 1.34
PKD1-235ENST00000568591 POGKQ9P215 609 aa23.42■■□□□ 1.34
PKD1-235ENST00000568591 EVC2Q86UK5 1308 aa23.42■■□□□ 1.34
PKD1-235ENST00000568591 ANKRD36BQ8N2N9 1353 aa23.41■■□□□ 1.34
PKD1-235ENST00000568591 MVPQ14764 893 aaKnown RBP23.41■■□□□ 1.34
PKD1-235ENST00000568591 GLI2P10070 1586 aa23.41■■□□□ 1.34
PKD1-235ENST00000568591 MYH16Q9H6N6 1097 aa23.4■■□□□ 1.34
PKD1-235ENST00000568591 EXOSC9Q06265 439 aaKnown RBP23.39■■□□□ 1.34
PKD1-235ENST00000568591 SPRYD3Q8NCJ5 442 aa23.39■■□□□ 1.33
PKD1-235ENST00000568591 CD109Q6YHK3 1445 aa23.39■■□□□ 1.33
PKD1-235ENST00000568591 RAPGEF3O95398 923 aa23.38■■□□□ 1.33
PKD1-235ENST00000568591 FTSJ3Q8IY81 847 aaKnown RBP23.38■■□□□ 1.33
PKD1-235ENST00000568591 TBC1D32Q96NH3 1257 aa23.38■■□□□ 1.33
PKD1-235ENST00000568591 RWDD1Q9H446 243 aaPredicted RBP23.38■■□□□ 1.33
PKD1-235ENST00000568591 POGZQ7Z3K3 1410 aa23.38■■□□□ 1.33
PKD1-235ENST00000568591 ZKSCAN2Q63HK3 967 aa23.37■■□□□ 1.33
PKD1-235ENST00000568591 A0A1W2PP64 1363 aa23.37■■□□□ 1.33
PKD1-235ENST00000568591 USP32Q8NFA0 1604 aa23.37■■□□□ 1.33
PKD1-235ENST00000568591 SIGLEC1Q9BZZ2 1709 aa23.37■■□□□ 1.33
PKD1-235ENST00000568591 DZIP1LQ8IYY4 767 aaKnown RBP23.37■■□□□ 1.33
PKD1-235ENST00000568591 TBC1D2Q9BYX2 928 aa23.37■■□□□ 1.33
PKD1-235ENST00000568591 SMC4Q9NTJ3 1288 aa23.37■■□□□ 1.33
PKD1-235ENST00000568591 ABCC3O15438 1527 aa23.37■■□□□ 1.33
PKD1-235ENST00000568591 ANTXR1Q9H6X2 564 aa23.36■■□□□ 1.33
PKD1-235ENST00000568591 TRIM35Q9UPQ4 493 aa23.36■■□□□ 1.33
PKD1-235ENST00000568591 TRIM27P14373 513 aa23.36■■□□□ 1.33
PKD1-235ENST00000568591 SRPK2P78362 688 aaKnown RBP23.36■■□□□ 1.33
PKD1-235ENST00000568591 BECN1Q14457 450 aa23.36■■□□□ 1.33
PKD1-235ENST00000568591 PLEKHF1Q96S99 279 aa23.36■■□□□ 1.33
PKD1-235ENST00000568591 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.36■■□□□ 1.33
PKD1-235ENST00000568591 SSH1Q8WYL5 1049 aa23.35■■□□□ 1.33
PKD1-235ENST00000568591 RPGRIP1LQ68CZ1 1315 aa23.35■■□□□ 1.33
PKD1-235ENST00000568591 ARHGEF28Q8N1W1 1705 aaKnown RBP23.35■■□□□ 1.33
PKD1-235ENST00000568591 TMPOP42166 694 aaKnown RBP23.34■■□□□ 1.33
PKD1-235ENST00000568591 HECW2Q9P2P5 1572 aa23.34■■□□□ 1.33
PKD1-235ENST00000568591 IDI1Q13907 227 aa23.33■■□□□ 1.33
PKD1-235ENST00000568591 CAMSAP1Q5T5Y3 1602 aa23.33■■□□□ 1.32
PKD1-235ENST00000568591 ADGRB2O60241 1585 aa23.32■■□□□ 1.32
PKD1-235ENST00000568591 VGFO15240 615 aaPredicted RBP23.32■■□□□ 1.32
PKD1-235ENST00000568591 ITPRIPQ8IWB1 547 aa23.32■■□□□ 1.32
PKD1-235ENST00000568591 UPF2Q9HAU5 1272 aaKnown RBP23.32■■□□□ 1.32
PKD1-235ENST00000568591 MINK1Q8N4C8 1332 aaPredicted RBP23.32■■□□□ 1.32
PKD1-235ENST00000568591 NEXMIFQ5QGS0 1516 aa23.32■■□□□ 1.32
PKD1-235ENST00000568591 FBLN1P23142 703 aa23.31■■□□□ 1.32
PKD1-235ENST00000568591 AAMPQ13685 434 aa23.31■■□□□ 1.32
PKD1-235ENST00000568591 MLH3Q9UHC1 1453 aa23.3■■□□□ 1.32
PKD1-235ENST00000568591 NOB1Q9ULX3 412 aaKnown RBP23.3■■□□□ 1.32
PKD1-235ENST00000568591 NSD2O96028 1365 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms