RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 ATP7AQ04656 1500 aa27.59■■■□□ 2.01
DENND4A-208ENST00000568515 KIF1BO60333 1816 aa27.59■■■□□ 2.01
DENND4A-208ENST00000568515 NSD3Q9BZ95 1437 aa27.58■■■□□ 2.01
DENND4A-208ENST00000568515 WDR63Q8IWG1 891 aa27.58■■■□□ 2.01
DENND4A-208ENST00000568515 RLBP1P12271 317 aa27.57■■■□□ 2
DENND4A-208ENST00000568515 ZMYM3Q14202 1370 aa27.57■■■□□ 2
DENND4A-208ENST00000568515 TNNT2P45379 298 aaPredicted RBP27.56■■■□□ 2
DENND4A-208ENST00000568515 SLKQ9H2G2 1235 aaPredicted RBP27.56■■■□□ 2
DENND4A-208ENST00000568515 IFT172Q9UG01 1749 aa27.56■■■□□ 2
DENND4A-208ENST00000568515 IQSEC2Q5JU85 1478 aa27.56■■■□□ 2
DENND4A-208ENST00000568515 INO80Q9ULG1 1556 aaPredicted RBP27.56■■■□□ 2
DENND4A-208ENST00000568515 PRKCSHP14314 528 aaPredicted RBP27.55■■■□□ 2
DENND4A-208ENST00000568515 UPF2Q9HAU5 1272 aaKnown RBP27.55■■■□□ 2
DENND4A-208ENST00000568515 TNNQ9UQP3 1299 aa27.55■■■□□ 2
DENND4A-208ENST00000568515 NRXN1Q9ULB1 1477 aa27.55■■■□□ 2
DENND4A-208ENST00000568515 POGKQ9P215 609 aa27.55■■■□□ 2
DENND4A-208ENST00000568515 PDZRN3Q9UPQ7 1066 aa27.54■■■□□ 2
DENND4A-208ENST00000568515 TBC1D32Q96NH3 1257 aa27.54■■■□□ 2
DENND4A-208ENST00000568515 ANTXR1Q9H6X2 564 aa27.54■■■□□ 2
DENND4A-208ENST00000568515 SLC12A5Q9H2X9 1139 aa27.53■■■□□ 2
DENND4A-208ENST00000568515 MROH1Q8NDA8 1641 aa27.52■■■□□ 2
DENND4A-208ENST00000568515 BCL2L13Q9BXK5 485 aa27.52■■■□□ 2
DENND4A-208ENST00000568515 RWDD1Q9H446 243 aaPredicted RBP27.52■■■□□ 2
DENND4A-208ENST00000568515 CCDC27Q2M243 656 aa27.51■■□□□ 1.99
DENND4A-208ENST00000568515 MROH2AA6NES4 1674 aa27.5■■□□□ 1.99
DENND4A-208ENST00000568515 FAM43AQ8N2R8 423 aa27.5■■□□□ 1.99
DENND4A-208ENST00000568515 TRAK1Q9UPV9 953 aa27.49■■□□□ 1.99
DENND4A-208ENST00000568515 SETBP1Q9Y6X0 1596 aa27.48■■□□□ 1.99
DENND4A-208ENST00000568515 MTHFSP49914 203 aa27.48■■□□□ 1.99
DENND4A-208ENST00000568515 FANCAO15360 1455 aa27.48■■□□□ 1.99
DENND4A-208ENST00000568515 EFCAB6Q5THR3 1501 aa27.48■■□□□ 1.99
DENND4A-208ENST00000568515 TBC1D2Q9BYX2 928 aa27.47■■□□□ 1.99
DENND4A-208ENST00000568515 NOS1P29475 1434 aa27.47■■□□□ 1.99
DENND4A-208ENST00000568515 ZNF518AQ6AHZ1 1483 aa27.46■■□□□ 1.99
DENND4A-208ENST00000568515 CFAP53Q96M91 514 aa27.46■■□□□ 1.99
DENND4A-208ENST00000568515 MYH16Q9H6N6 1097 aa27.45■■□□□ 1.99
DENND4A-208ENST00000568515 ABCA9Q8IUA7 1624 aa27.44■■□□□ 1.98
DENND4A-208ENST00000568515 MVPQ14764 893 aaKnown RBP27.43■■□□□ 1.98
DENND4A-208ENST00000568515 NCBP3Q53F19 620 aaKnown RBP27.43■■□□□ 1.98
DENND4A-208ENST00000568515 ZC3H13Q5T200 1668 aaKnown RBP27.42■■□□□ 1.98
DENND4A-208ENST00000568515 QRICH2Q9H0J4 1663 aa27.42■■□□□ 1.98
DENND4A-208ENST00000568515 PPRC1Q5VV67 1664 aaKnown RBP27.42■■□□□ 1.98
DENND4A-208ENST00000568515 USP32Q8NFA0 1604 aa27.42■■□□□ 1.98
DENND4A-208ENST00000568515 CHGAP10645 457 aaKnown RBP27.42■■□□□ 1.98
DENND4A-208ENST00000568515 C14orf93Q9H972 538 aaKnown RBP27.42■■□□□ 1.98
DENND4A-208ENST00000568515 ADGRB3O60242 1522 aa27.41■■□□□ 1.98
DENND4A-208ENST00000568515 ADGRL1O94910 1474 aa27.4■■□□□ 1.98
DENND4A-208ENST00000568515 L1TD1Q5T7N2 865 aaKnown RBP27.4■■□□□ 1.98
DENND4A-208ENST00000568515 ZKSCAN2Q63HK3 967 aa27.4■■□□□ 1.98
DENND4A-208ENST00000568515 DZIP1LQ8IYY4 767 aaKnown RBP27.37■■□□□ 1.97
DENND4A-208ENST00000568515 LMTK2Q8IWU2 1503 aa27.36■■□□□ 1.97
DENND4A-208ENST00000568515 U2AF1L5P0DN76 240 aaPredicted RBP27.36■■□□□ 1.97
DENND4A-208ENST00000568515 U2AF1Q01081 240 aaKnown RBP eCLIP27.36■■□□□ 1.97
DENND4A-208ENST00000568515 FTSJ3Q8IY81 847 aaKnown RBP27.36■■□□□ 1.97
DENND4A-208ENST00000568515 ADGRB1O14514 1584 aa27.36■■□□□ 1.97
DENND4A-208ENST00000568515 TMEM132EQ6IEE7 984 aa27.36■■□□□ 1.97
DENND4A-208ENST00000568515 CT47B1P0C2W7 299 aaPredicted RBP27.34■■□□□ 1.97
DENND4A-208ENST00000568515 PPLO60437 1756 aa27.33■■□□□ 1.97
DENND4A-208ENST00000568515 C22orf23Q9BZE7 217 aa27.32■■□□□ 1.96
DENND4A-208ENST00000568515 ADGRB2O60241 1585 aa27.31■■□□□ 1.96
DENND4A-208ENST00000568515 NSD2O96028 1365 aa27.31■■□□□ 1.96
DENND4A-208ENST00000568515 SPRYD3Q8NCJ5 442 aa27.31■■□□□ 1.96
DENND4A-208ENST00000568515 PUS7Q96PZ0 661 aaKnown RBP27.31■■□□□ 1.96
DENND4A-208ENST00000568515 RSPH6AQ9H0K4 717 aa27.31■■□□□ 1.96
DENND4A-208ENST00000568515 MCM4P33991 863 aa27.3■■□□□ 1.96
DENND4A-208ENST00000568515 TSR2Q969E8 191 aaKnown RBP27.3■■□□□ 1.96
DENND4A-208ENST00000568515 ANKRD36BQ8N2N9 1353 aa27.3■■□□□ 1.96
DENND4A-208ENST00000568515 KIDINS220Q9ULH0 1771 aa27.29■■□□□ 1.96
DENND4A-208ENST00000568515 HDAC1Q13547 482 aaPredicted RBP27.29■■□□□ 1.96
DENND4A-208ENST00000568515 SMC4Q9NTJ3 1288 aa27.29■■□□□ 1.96
DENND4A-208ENST00000568515 EVC2Q86UK5 1308 aa27.28■■□□□ 1.96
DENND4A-208ENST00000568515 EIF5BO60841 1220 aaKnown RBP27.28■■□□□ 1.96
DENND4A-208ENST00000568515 MFAP1P55081 439 aaKnown RBP27.28■■□□□ 1.96
DENND4A-208ENST00000568515 TRIM27P14373 513 aa27.27■■□□□ 1.96
DENND4A-208ENST00000568515 EXOSC9Q06265 439 aaKnown RBP27.27■■□□□ 1.96
DENND4A-208ENST00000568515 RPGRIP1LQ68CZ1 1315 aa27.27■■□□□ 1.96
DENND4A-208ENST00000568515 CHMP5Q9NZZ3 219 aa27.26■■□□□ 1.96
DENND4A-208ENST00000568515 DDX19BQ9UMR2 479 aa27.26■■□□□ 1.95
DENND4A-208ENST00000568515 CFAP65Q6ZU64 1925 aaKnown RBP27.26■■□□□ 1.95
DENND4A-208ENST00000568515 NPATQ14207 1427 aa27.26■■□□□ 1.95
DENND4A-208ENST00000568515 SSH1Q8WYL5 1049 aa27.24■■□□□ 1.95
DENND4A-208ENST00000568515 GOLGA6L3A6NEY3 463 aa27.24■■□□□ 1.95
DENND4A-208ENST00000568515 ITPRIPQ8IWB1 547 aa27.24■■□□□ 1.95
DENND4A-208ENST00000568515 RRAGDQ9NQL2 400 aaPredicted RBP27.24■■□□□ 1.95
DENND4A-208ENST00000568515 FSD2A1L4K1 749 aa27.23■■□□□ 1.95
DENND4A-208ENST00000568515 PLEKHF1Q96S99 279 aa27.23■■□□□ 1.95
DENND4A-208ENST00000568515 TMPOP42166 694 aaKnown RBP27.23■■□□□ 1.95
DENND4A-208ENST00000568515 ATF7IPQ6VMQ6 1270 aa27.23■■□□□ 1.95
DENND4A-208ENST00000568515 TULP4Q9NRJ4 1543 aa27.22■■□□□ 1.95
DENND4A-208ENST00000568515 XRCC6P12956 609 aaKnown RBP eCLIP27.22■■□□□ 1.95
DENND4A-208ENST00000568515 SMC5Q8IY18 1101 aa27.21■■□□□ 1.95
DENND4A-208ENST00000568515 TRIM35Q9UPQ4 493 aa27.21■■□□□ 1.95
DENND4A-208ENST00000568515 CD109Q6YHK3 1445 aa27.21■■□□□ 1.95
DENND4A-208ENST00000568515 GLI2P10070 1586 aa27.2■■□□□ 1.94
DENND4A-208ENST00000568515 U2SURPO15042 1029 aaKnown RBP27.2■■□□□ 1.94
DENND4A-208ENST00000568515 CABP2Q9NPB3 220 aa27.19■■□□□ 1.94
DENND4A-208ENST00000568515 NOB1Q9ULX3 412 aaKnown RBP27.19■■□□□ 1.94
DENND4A-208ENST00000568515 GZF1Q9H116 711 aaPredicted RBP27.18■■□□□ 1.94
DENND4A-208ENST00000568515 ARXQ96QS3 562 aa27.18■■□□□ 1.94
DENND4A-208ENST00000568515 TRAK2O60296 914 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms