RNA–Protein interactions for RNA: ENST00000568503.1

NOL3-213, Transcript of nucleolar protein 3, human

TSL 5

Gene NOL3, Length 1,511 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NOL3-213	ENST00000568503	PLEKHH1	Q9ULM0	1364 aa		32.83	■■■□□ 2.85
NOL3-213	ENST00000568503	NPHP4	O75161	1426 aa	Predicted RBP	32.82	■■■□□ 2.85
NOL3-213	ENST00000568503	PTPRU	Q92729	1446 aa		32.82	■■■□□ 2.85
NOL3-213	ENST00000568503	PER1	O15534	1290 aa	Predicted RBP	32.82	■■■□□ 2.85
NOL3-213	ENST00000568503	KTN1	Q86UP2	1357 aa	Known RBP	32.82	■■■□□ 2.84
NOL3-213	ENST00000568503	AMOTL2	Q9Y2J4	779 aa		32.81	■■■□□ 2.84
NOL3-213	ENST00000568503	PTCH1	Q13635	1447 aa		32.8	■■■□□ 2.84
NOL3-213	ENST00000568503	ROBO2	Q9HCK4	1378 aa		32.8	■■■□□ 2.84
NOL3-213	ENST00000568503	ATAD2	Q6PL18	1390 aa		32.79	■■■□□ 2.84
NOL3-213	ENST00000568503	NINL	Q9Y2I6	1382 aa		32.79	■■■□□ 2.84
NOL3-213	ENST00000568503	SRPK2	P78362	688 aa	Known RBP	32.79	■■■□□ 2.84
NOL3-213	ENST00000568503	XRN1	Q8IZH2	1706 aa	Known RBP	32.78	■■■□□ 2.84
NOL3-213	ENST00000568503	CABP2	Q9NPB3	220 aa		32.77	■■■□□ 2.84
NOL3-213	ENST00000568503	KNSTRN	Q9Y448	316 aa		32.76	■■■□□ 2.83
NOL3-213	ENST00000568503	CDK19	Q9BWU1	502 aa		32.75	■■■□□ 2.83
NOL3-213	ENST00000568503	TMC1	Q8TDI8	760 aa		32.74	■■■□□ 2.83
NOL3-213	ENST00000568503	RALBP1	Q15311	655 aa		32.73	■■■□□ 2.83
NOL3-213	ENST00000568503	NCKAP5L	Q9HCH0	1330 aa		32.73	■■■□□ 2.83
NOL3-213	ENST00000568503	ADGRB2	O60241	1585 aa		32.71	■■■□□ 2.83
NOL3-213	ENST00000568503	WASL	O00401	505 aa	Predicted RBP	32.7	■■■□□ 2.83
NOL3-213	ENST00000568503	CHD2	O14647	1828 aa	Known RBP	32.7	■■■□□ 2.82
NOL3-213	ENST00000568503	SLC12A5	Q9H2X9	1139 aa		32.69	■■■□□ 2.82
NOL3-213	ENST00000568503	NPC1L1	Q9UHC9	1359 aa		32.67	■■■□□ 2.82
NOL3-213	ENST00000568503	ANKRD36B	Q8N2N9	1353 aa		32.65	■■■□□ 2.82
NOL3-213	ENST00000568503	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.65	■■■□□ 2.82
NOL3-213	ENST00000568503	PARD3	Q8TEW0	1356 aa		32.65	■■■□□ 2.82
NOL3-213	ENST00000568503	LMTK3	Q96Q04	1460 aa		32.64	■■■□□ 2.82
NOL3-213	ENST00000568503	KCNA6	P17658	529 aa		32.64	■■■□□ 2.82
NOL3-213	ENST00000568503	CNGB1	Q14028	1251 aa	Predicted RBP	32.62	■■■□□ 2.81
NOL3-213	ENST00000568503	AMER1	Q5JTC6	1135 aa	Predicted RBP	32.61	■■■□□ 2.81
NOL3-213	ENST00000568503	CARD14	Q9BXL6	1004 aa		32.61	■■■□□ 2.81
NOL3-213	ENST00000568503	TERF2IP	Q9NYB0	399 aa		32.61	■■■□□ 2.81
NOL3-213	ENST00000568503	MYBBP1A	Q9BQG0	1328 aa	Known RBP	32.6	■■■□□ 2.81
NOL3-213	ENST00000568503	CC2D1B	Q5T0F9	858 aa	Known RBP	32.6	■■■□□ 2.81
NOL3-213	ENST00000568503	HSPA2	P54652	639 aa		32.57	■■■□□ 2.8
NOL3-213	ENST00000568503	NSD3	Q9BZ95	1437 aa		32.57	■■■□□ 2.8
NOL3-213	ENST00000568503	USP32	Q8NFA0	1604 aa		32.57	■■■□□ 2.8
NOL3-213	ENST00000568503	NWD1	Q149M9	1564 aa		32.57	■■■□□ 2.8
NOL3-213	ENST00000568503	ATP7B	P35670	1465 aa		32.55	■■■□□ 2.8
NOL3-213	ENST00000568503	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	32.55	■■■□□ 2.8
NOL3-213	ENST00000568503	NUDT16	Q96DE0	195 aa	Known RBP	32.55	■■■□□ 2.8
NOL3-213	ENST00000568503	MRS2	Q9HD23	443 aa		32.54	■■■□□ 2.8
NOL3-213	ENST00000568503	YTHDC1	Q96MU7	727 aa	Known RBP	32.53	■■■□□ 2.8
NOL3-213	ENST00000568503	CABP1	Q9NZU7	370 aa		32.53	■■■□□ 2.8
NOL3-213	ENST00000568503	CCDC61	Q9Y6R9	512 aa		32.53	■■■□□ 2.8
NOL3-213	ENST00000568503		A0A1W2PP64	1363 aa		32.52	■■■□□ 2.8
NOL3-213	ENST00000568503	PPIP5K1	Q6PFW1	1433 aa		32.51	■■■□□ 2.79
NOL3-213	ENST00000568503	CGNL1	Q0VF96	1302 aa		32.51	■■■□□ 2.79
NOL3-213	ENST00000568503	CD163L1	Q9NR16	1453 aa		32.5	■■■□□ 2.79
NOL3-213	ENST00000568503	BRD4	O60885	1362 aa	Predicted RBP	32.5	■■■□□ 2.79
NOL3-213	ENST00000568503	NLRP13	Q86W25	1043 aa		32.5	■■■□□ 2.79
NOL3-213	ENST00000568503	NSD2	O96028	1365 aa		32.48	■■■□□ 2.79
NOL3-213	ENST00000568503	NKTR	P30414	1462 aa	Known RBP	32.47	■■■□□ 2.79
NOL3-213	ENST00000568503	CCDC184	Q52MB2	194 aa		32.46	■■■□□ 2.79
NOL3-213	ENST00000568503	PRR36	Q9H6K5	1346 aa		32.45	■■■□□ 2.78
NOL3-213	ENST00000568503	TOPAZ1	Q8N9V7	1692 aa		32.44	■■■□□ 2.78
NOL3-213	ENST00000568503	CDC42BPG	Q6DT37	1551 aa		32.43	■■■□□ 2.78
NOL3-213	ENST00000568503	STRC	Q7RTU9	1775 aa		32.43	■■■□□ 2.78
NOL3-213	ENST00000568503	ANKAR	Q7Z5J8	1434 aa		32.43	■■■□□ 2.78
NOL3-213	ENST00000568503	CPSF1	Q10570	1443 aa	Known RBP	32.42	■■■□□ 2.78
NOL3-213	ENST00000568503	ADGRL3	Q9HAR2	1447 aa		32.42	■■■□□ 2.78
NOL3-213	ENST00000568503	ITSN1	Q15811	1721 aa		32.41	■■■□□ 2.78
NOL3-213	ENST00000568503	NALCN	Q8IZF0	1738 aa		32.41	■■■□□ 2.78
NOL3-213	ENST00000568503	FMN2	Q9NZ56	1722 aa		32.39	■■■□□ 2.78
NOL3-213	ENST00000568503	CENPB	P07199	599 aa	Predicted RBP	32.39	■■■□□ 2.78
NOL3-213	ENST00000568503	ZNF692	Q9BU19	519 aa	Predicted RBP	32.39	■■■□□ 2.78
NOL3-213	ENST00000568503	PLEKHG3	A1L390	1219 aa		32.38	■■■□□ 2.77
NOL3-213	ENST00000568503	PPP2R1A	P30153	589 aa		32.37	■■■□□ 2.77
NOL3-213	ENST00000568503	PROSER2	Q86WR7	435 aa	Predicted RBP	32.37	■■■□□ 2.77
NOL3-213	ENST00000568503	MORC1	Q86VD1	984 aa		32.36	■■■□□ 2.77
NOL3-213	ENST00000568503	EDC4	Q6P2E9	1401 aa	Known RBP	32.35	■■■□□ 2.77
NOL3-213	ENST00000568503	AKAP12	Q02952	1782 aa		32.35	■■■□□ 2.77
NOL3-213	ENST00000568503	C14orf37	Q86TY3	774 aa		32.34	■■■□□ 2.77
NOL3-213	ENST00000568503	MON2	Q7Z3U7	1717 aa		32.34	■■■□□ 2.77
NOL3-213	ENST00000568503	NUTM2F	A1L443	756 aa		32.33	■■■□□ 2.77
NOL3-213	ENST00000568503	NCOA3	Q9Y6Q9	1424 aa		32.32	■■■□□ 2.77
NOL3-213	ENST00000568503	FAM9B	Q8IZU0	186 aa		32.31	■■■□□ 2.76
NOL3-213	ENST00000568503	ANKRD26	Q9UPS8	1709 aa		32.3	■■■□□ 2.76
NOL3-213	ENST00000568503	KIF20B	Q96Q89	1820 aa		32.3	■■■□□ 2.76
NOL3-213	ENST00000568503	PNISR	Q8TF01	805 aa	Known RBP	32.3	■■■□□ 2.76
NOL3-213	ENST00000568503	ACE	P12821	1306 aa		32.29	■■■□□ 2.76
NOL3-213	ENST00000568503	FYB1	O15117	783 aa		32.28	■■■□□ 2.76
NOL3-213	ENST00000568503	DMRT2	Q9Y5R5	561 aa		32.28	■■■□□ 2.76
NOL3-213	ENST00000568503	STRCP1	A6NGW2	1772 aa		32.27	■■■□□ 2.76
NOL3-213	ENST00000568503	RBM33	Q96EV2	1170 aa	Known RBP	32.27	■■■□□ 2.76
NOL3-213	ENST00000568503	RGPD8	O14715	1765 aa	Predicted RBP	32.26	■■■□□ 2.75
NOL3-213	ENST00000568503	POLR3A	O14802	1390 aa	Predicted RBP	32.25	■■■□□ 2.75
NOL3-213	ENST00000568503	C19orf44	Q9H6X5	657 aa		32.25	■■■□□ 2.75
NOL3-213	ENST00000568503	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	32.23	■■■□□ 2.75
NOL3-213	ENST00000568503	GGNBP2	Q9H3C7	697 aa		32.23	■■■□□ 2.75
NOL3-213	ENST00000568503	USP6	P35125	1406 aa		32.23	■■■□□ 2.75
NOL3-213	ENST00000568503	TMEM94	Q12767	1356 aa		32.22	■■■□□ 2.75
NOL3-213	ENST00000568503	NGDN	Q8NEJ9	315 aa	Known RBP	32.21	■■■□□ 2.75
NOL3-213	ENST00000568503	NRK	Q7Z2Y5	1582 aa		32.2	■■■□□ 2.75
NOL3-213	ENST00000568503	DCC	P43146	1447 aa		32.2	■■■□□ 2.74
NOL3-213	ENST00000568503	PMFBP1	Q8TBY8	1022 aa		32.19	■■■□□ 2.74
NOL3-213	ENST00000568503	TTC21B	Q7Z4L5	1316 aa		32.16	■■■□□ 2.74
NOL3-213	ENST00000568503	TNNT2	P45379	298 aa	Predicted RBP	32.16	■■■□□ 2.74
NOL3-213	ENST00000568503	PHF8	Q9UPP1	1060 aa		32.16	■■■□□ 2.74
NOL3-213	ENST00000568503	TTC21A	Q8NDW8	1320 aa		32.15	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms