RNA–Protein interactions for RNA: ENST00000568428.5

SCAPER-220, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 590 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-220ENST00000568428 USB1Q9BQ65 265 aaKnown RBP10.44□□□□□ -0.74
SCAPER-220ENST00000568428 PRDM9Q9NQV7 894 aa10.44□□□□□ -0.74
SCAPER-220ENST00000568428 MOXD2PA6NHM9 499 aa10.43□□□□□ -0.74
SCAPER-220ENST00000568428 NDUFV2P19404 249 aa10.43□□□□□ -0.74
SCAPER-220ENST00000568428 SYMPKQ92797 1274 aaKnown RBP10.43□□□□□ -0.74
SCAPER-220ENST00000568428 FDX1P10109 184 aa10.42□□□□□ -0.74
SCAPER-220ENST00000568428 MMP16P51512 607 aa10.42□□□□□ -0.74
SCAPER-220ENST00000568428 TBC1D2Q9BYX2 928 aa10.42□□□□□ -0.74
SCAPER-220ENST00000568428 SPRYD7Q5W111 196 aa10.41□□□□□ -0.74
SCAPER-220ENST00000568428 GFRA3O60609 400 aa10.4□□□□□ -0.74
SCAPER-220ENST00000568428 FCF1Q9Y324 198 aaKnown RBP10.4□□□□□ -0.74
SCAPER-220ENST00000568428 DXOO77932 396 aaKnown RBP10.38□□□□□ -0.75
SCAPER-220ENST00000568428 GJA5P36382 358 aa10.38□□□□□ -0.75
SCAPER-220ENST00000568428 DIXDC1Q155Q3 683 aa10.38□□□□□ -0.75
SCAPER-220ENST00000568428 ZNF598Q86UK7 904 aaKnown RBP10.38□□□□□ -0.75
SCAPER-220ENST00000568428 RETREG3Q86VR2 466 aa10.37□□□□□ -0.75
SCAPER-220ENST00000568428 RSBN1LQ6PCB5 846 aaPredicted RBP10.36□□□□□ -0.75
SCAPER-220ENST00000568428 TRIM67Q6ZTA4 783 aa10.36□□□□□ -0.75
SCAPER-220ENST00000568428 SPTLC1O15269 473 aa10.35□□□□□ -0.75
SCAPER-220ENST00000568428 RPIAP49247 311 aa10.35□□□□□ -0.75
SCAPER-220ENST00000568428 TRAF7Q6Q0C0 670 aa10.35□□□□□ -0.75
SCAPER-220ENST00000568428 PCDHB15Q9Y5E8 787 aa10.35□□□□□ -0.75
SCAPER-220ENST00000568428 C6orf229H3BNL8 230 aa10.34□□□□□ -0.75
SCAPER-220ENST00000568428 NRG2O14511 850 aaPredicted RBP10.33□□□□□ -0.76
SCAPER-220ENST00000568428 JUNDP17535 347 aa10.33□□□□□ -0.76
SCAPER-220ENST00000568428 RIC3Q7Z5B4 369 aa10.33□□□□□ -0.76
SCAPER-220ENST00000568428 GPBP1L1Q9HC44 474 aaPredicted RBP10.33□□□□□ -0.76
SCAPER-220ENST00000568428 ZNF697Q5TEC3 545 aa10.32□□□□□ -0.76
SCAPER-220ENST00000568428 MYSM1Q5VVJ2 828 aa10.32□□□□□ -0.76
SCAPER-220ENST00000568428 PDZRN3Q9UPQ7 1066 aa10.32□□□□□ -0.76
SCAPER-220ENST00000568428 MTMR2Q13614 643 aa10.31□□□□□ -0.76
SCAPER-220ENST00000568428 KDM4CQ9H3R0 1056 aa10.31□□□□□ -0.76
SCAPER-220ENST00000568428 SPDYE5A6NIY4 337 aa10.3□□□□□ -0.76
SCAPER-220ENST00000568428 GDF9O60383 454 aa10.3□□□□□ -0.76
SCAPER-220ENST00000568428 CD2BP2O95400 341 aaKnown RBP10.3□□□□□ -0.76
SCAPER-220ENST00000568428 LIMD1Q9UGP4 676 aa10.3□□□□□ -0.76
SCAPER-220ENST00000568428 HRCP23327 699 aa10.29□□□□□ -0.76
SCAPER-220ENST00000568428 PRR20EP86478 221 aa10.29□□□□□ -0.76
SCAPER-220ENST00000568428 PRR20CP86479 221 aa10.29□□□□□ -0.76
SCAPER-220ENST00000568428 PRR20DP86480 221 aa10.29□□□□□ -0.76
SCAPER-220ENST00000568428 PRR20BP86481 221 aa10.29□□□□□ -0.76
SCAPER-220ENST00000568428 PRR20AP86496 221 aa10.29□□□□□ -0.76
SCAPER-220ENST00000568428 PRR7Q8TB68 274 aa10.29□□□□□ -0.76
SCAPER-220ENST00000568428 TUSC1Q2TAM9 212 aa10.28□□□□□ -0.76
SCAPER-220ENST00000568428 PRPF38BQ5VTL8 546 aaKnown RBP10.28□□□□□ -0.76
SCAPER-220ENST00000568428 FAM117AQ9C073 453 aa10.28□□□□□ -0.76
SCAPER-220ENST00000568428 PKD2L1Q9P0L9 805 aa10.28□□□□□ -0.76
SCAPER-220ENST00000568428 ZBTB24O43167 697 aaPredicted RBP10.27□□□□□ -0.77
SCAPER-220ENST00000568428 DESI1Q6ICB0 168 aa10.27□□□□□ -0.77
SCAPER-220ENST00000568428 CCDC24Q8N4L8 307 aa10.27□□□□□ -0.77
SCAPER-220ENST00000568428 LCE2BO14633 110 aa10.26□□□□□ -0.77
SCAPER-220ENST00000568428 RSPH6AQ9H0K4 717 aa10.26□□□□□ -0.77
SCAPER-220ENST00000568428 ZBTB3Q9H5J0 574 aa10.26□□□□□ -0.77
SCAPER-220ENST00000568428 TRIM32Q13049 653 aa10.25□□□□□ -0.77
SCAPER-220ENST00000568428 PTCRAQ6ISU1 281 aaPredicted RBP10.25□□□□□ -0.77
SCAPER-220ENST00000568428 CABLES1Q8TDN4 633 aa10.25□□□□□ -0.77
SCAPER-220ENST00000568428 NUDT12Q9BQG2 462 aa10.25□□□□□ -0.77
SCAPER-220ENST00000568428 PLEKHG3A1L390 1219 aa10.24□□□□□ -0.77
SCAPER-220ENST00000568428 CFAP99D6REC4 459 aa10.24□□□□□ -0.77
SCAPER-220ENST00000568428 LILRB3O75022 631 aa10.24□□□□□ -0.77
SCAPER-220ENST00000568428 QPCTQ16769 361 aa10.24□□□□□ -0.77
SCAPER-220ENST00000568428 PTPRNQ16849 979 aa10.24□□□□□ -0.77
SCAPER-220ENST00000568428 TNFRSF10AO00220 468 aa10.23□□□□□ -0.77
SCAPER-220ENST00000568428 CSPP1Q1MSJ5 1256 aa10.23□□□□□ -0.77
SCAPER-220ENST00000568428 TPRNQ4KMQ1 711 aa10.23□□□□□ -0.77
SCAPER-220ENST00000568428 DDRGK1Q96HY6 314 aa10.23□□□□□ -0.77
SCAPER-220ENST00000568428 EVA1BQ9NVM1 165 aa10.23□□□□□ -0.77
SCAPER-220ENST00000568428 POLR3EQ9NVU0 708 aa10.23□□□□□ -0.77
SCAPER-220ENST00000568428 CLK2P49760 499 aaKnown RBP10.22□□□□□ -0.77
SCAPER-220ENST00000568428 FOXC1Q12948 553 aa10.22□□□□□ -0.77
SCAPER-220ENST00000568428 CCNYL3P0C7X3 344 aa10.21□□□□□ -0.77
SCAPER-220ENST00000568428 LYPD8Q6UX82 237 aa10.21□□□□□ -0.77
SCAPER-220ENST00000568428 SKIV2LQ15477 1246 aaKnown RBP10.2□□□□□ -0.78
SCAPER-220ENST00000568428 SKOR1P84550 965 aa10.19□□□□□ -0.78
SCAPER-220ENST00000568428 SH3D19Q5HYK7 790 aa10.19□□□□□ -0.78
SCAPER-220ENST00000568428 RTL5Q5HYW3 569 aaPredicted RBP10.19□□□□□ -0.78
SCAPER-220ENST00000568428 NUTM2BA6NNL0 878 aaPredicted RBP10.18□□□□□ -0.78
SCAPER-220ENST00000568428 NUTM2EB1AL46 878 aaPredicted RBP10.18□□□□□ -0.78
SCAPER-220ENST00000568428 WNT7AO00755 349 aa10.18□□□□□ -0.78
SCAPER-220ENST00000568428 KCNH2Q12809 1159 aa10.18□□□□□ -0.78
SCAPER-220ENST00000568428 NUTM2DQ5VT03 806 aaPredicted RBP10.18□□□□□ -0.78
SCAPER-220ENST00000568428 NUTM2AQ8IVF1 878 aaPredicted RBP10.18□□□□□ -0.78
SCAPER-220ENST00000568428 TOR4AQ9NXH8 423 aa10.18□□□□□ -0.78
SCAPER-220ENST00000568428 WNT7BP56706 349 aa10.17□□□□□ -0.78
SCAPER-220ENST00000568428 PROCA1Q8NCQ7 364 aaPredicted RBP10.17□□□□□ -0.78
SCAPER-220ENST00000568428 DGAT1O75907 488 aa10.16□□□□□ -0.78
SCAPER-220ENST00000568428 BRPF1P55201 1214 aaPredicted RBP10.16□□□□□ -0.78
SCAPER-220ENST00000568428 NEUROD2Q15784 382 aa10.16□□□□□ -0.78
SCAPER-220ENST00000568428 FBXO31Q5XUX0 539 aaPredicted RBP10.16□□□□□ -0.78
SCAPER-220ENST00000568428 ZNF787Q6DD87 383 aa10.16□□□□□ -0.78
SCAPER-220ENST00000568428 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.16□□□□□ -0.78
SCAPER-220ENST00000568428 PER1O15534 1290 aaPredicted RBP10.15□□□□□ -0.78
SCAPER-220ENST00000568428 RC3H1Q5TC82 1133 aaKnown RBP10.15□□□□□ -0.78
SCAPER-220ENST00000568428 UNC93B1Q9H1C4 597 aa10.15□□□□□ -0.78
SCAPER-220ENST00000568428 F12P00748 615 aaPredicted RBP10.14□□□□□ -0.79
SCAPER-220ENST00000568428 MRGPRX2Q96LB1 330 aa10.14□□□□□ -0.79
SCAPER-220ENST00000568428 PKDCCQ504Y2 493 aa10.13□□□□□ -0.79
SCAPER-220ENST00000568428 CYP4X1Q8N118 509 aa10.13□□□□□ -0.79
SCAPER-220ENST00000568428 FAM187AA6NFU0 413 aa10.12□□□□□ -0.79
SCAPER-220ENST00000568428 SH3BP2P78314 561 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms