RNA–Protein interactions for RNA: ENST00000568359.1

SNX29-206, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-206ENST00000568359 ADGRL3Q9HAR2 1447 aa8.2□□□□□ -1.1
SNX29-206ENST00000568359 ERICH6Q7L0X2 663 aa8.19□□□□□ -1.1
SNX29-206ENST00000568359 CLTCL1P53675 1640 aa8.18□□□□□ -1.1
SNX29-206ENST00000568359 ADAMTS2O95450 1211 aa8.18□□□□□ -1.1
SNX29-206ENST00000568359 RBM6P78332 1123 aaKnown RBP8.18□□□□□ -1.1
SNX29-206ENST00000568359 TMEM132AQ24JP5 1023 aa8.18□□□□□ -1.1
SNX29-206ENST00000568359 NGLY1Q96IV0 654 aa8.18□□□□□ -1.1
SNX29-206ENST00000568359 QTRT2Q9H974 415 aaKnown RBP8.18□□□□□ -1.1
SNX29-206ENST00000568359 ATAD2Q6PL18 1390 aa8.18□□□□□ -1.1
SNX29-206ENST00000568359 PNPLA6Q8IY17 1366 aa8.18□□□□□ -1.1
SNX29-206ENST00000568359 METP08581 1390 aa8.17□□□□□ -1.1
SNX29-206ENST00000568359 NEXMIFQ5QGS0 1516 aa8.17□□□□□ -1.1
SNX29-206ENST00000568359 DDX17Q92841 729 aaKnown RBP8.16□□□□□ -1.1
SNX29-206ENST00000568359 MARF1Q9Y4F3 1742 aaKnown RBP8.15□□□□□ -1.1
SNX29-206ENST00000568359 LAMC1P11047 1609 aa8.15□□□□□ -1.1
SNX29-206ENST00000568359 C1orf167Q5SNV9 1468 aa8.15□□□□□ -1.1
SNX29-206ENST00000568359 USP21Q9UK80 565 aa8.15□□□□□ -1.1
SNX29-206ENST00000568359 PTCH1Q13635 1447 aa8.14□□□□□ -1.11
SNX29-206ENST00000568359 TRPC5Q9UL62 973 aaPredicted RBP8.14□□□□□ -1.11
SNX29-206ENST00000568359 COL22A1Q8NFW1 1626 aaPredicted RBP8.14□□□□□ -1.11
SNX29-206ENST00000568359 ATXN8OSP0DMR3 200 aa8.13□□□□□ -1.11
SNX29-206ENST00000568359 ZRANB1Q9UGI0 708 aa8.13□□□□□ -1.11
SNX29-206ENST00000568359 PPLO60437 1756 aa8.12□□□□□ -1.11
SNX29-206ENST00000568359 CDC42BPGQ6DT37 1551 aa8.11□□□□□ -1.11
SNX29-206ENST00000568359 VGFO15240 615 aaPredicted RBP8.11□□□□□ -1.11
SNX29-206ENST00000568359 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.11□□□□□ -1.11
SNX29-206ENST00000568359 HFM1A2PYH4 1435 aa8.11□□□□□ -1.11
SNX29-206ENST00000568359 NPHP3Q7Z494 1330 aa8.1□□□□□ -1.11
SNX29-206ENST00000568359 ORAI2Q96SN7 254 aa8.1□□□□□ -1.11
SNX29-206ENST00000568359 PODXL2Q9NZ53 605 aa8.1□□□□□ -1.11
SNX29-206ENST00000568359 ATRNO75882 1429 aa8.1□□□□□ -1.11
SNX29-206ENST00000568359 ROBO2Q9HCK4 1378 aa8.1□□□□□ -1.11
SNX29-206ENST00000568359 SOS2Q07890 1332 aaPredicted RBP8.09□□□□□ -1.11
SNX29-206ENST00000568359 KIF1AQ12756 1690 aa8.09□□□□□ -1.11
SNX29-206ENST00000568359 ESCO1Q5FWF5 840 aa8.09□□□□□ -1.11
SNX29-206ENST00000568359 LRPPRCP42704 1394 aaKnown RBP8.09□□□□□ -1.12
SNX29-206ENST00000568359 MYOM2P54296 1465 aa8.08□□□□□ -1.12
SNX29-206ENST00000568359 PPARGC1BQ86YN6 1023 aaKnown RBP8.08□□□□□ -1.12
SNX29-206ENST00000568359 PXDNQ92626 1479 aa8.07□□□□□ -1.12
SNX29-206ENST00000568359 IFT172Q9UG01 1749 aa8.07□□□□□ -1.12
SNX29-206ENST00000568359 PRAG1Q86YV5 1406 aa8.07□□□□□ -1.12
SNX29-206ENST00000568359 XPCQ01831 940 aaPredicted RBP8.07□□□□□ -1.12
SNX29-206ENST00000568359 SF3B2Q13435 895 aaKnown RBP8.07□□□□□ -1.12
SNX29-206ENST00000568359 CCDC125Q86Z20 511 aa8.07□□□□□ -1.12
SNX29-206ENST00000568359 FNBP4Q8N3X1 1017 aaPredicted RBP8.07□□□□□ -1.12
SNX29-206ENST00000568359 USP32Q8NFA0 1604 aa8.07□□□□□ -1.12
SNX29-206ENST00000568359 KNDC1Q76NI1 1749 aa8.06□□□□□ -1.12
SNX29-206ENST00000568359 RPGRIP1LQ68CZ1 1315 aa8.06□□□□□ -1.12
SNX29-206ENST00000568359 EP400Q96L91 3159 aa8.06□□□□□ -1.12
SNX29-206ENST00000568359 BRWD3Q6RI45 1802 aa8.06□□□□□ -1.12
SNX29-206ENST00000568359 NAIPQ13075 1403 aa8.06□□□□□ -1.12
SNX29-206ENST00000568359 PLCH1Q4KWH8 1693 aa8.06□□□□□ -1.12
SNX29-206ENST00000568359 FMN2Q9NZ56 1722 aa8.06□□□□□ -1.12
SNX29-206ENST00000568359 BCL9LQ86UU0 1499 aa8.06□□□□□ -1.12
SNX29-206ENST00000568359 CCDC144AA2RUR9 1427 aa8.05□□□□□ -1.12
SNX29-206ENST00000568359 BLMP54132 1417 aaPredicted RBP8.05□□□□□ -1.12
SNX29-206ENST00000568359 NUTM2FA1L443 756 aa8.05□□□□□ -1.12
SNX29-206ENST00000568359 FOXO3O43524 673 aa8.05□□□□□ -1.12
SNX29-206ENST00000568359 SLC4A2P04920 1241 aa8.05□□□□□ -1.12
SNX29-206ENST00000568359 GJD4Q96KN9 370 aaPredicted RBP8.05□□□□□ -1.12
SNX29-206ENST00000568359 CCDC9Q9Y3X0 531 aaKnown RBP8.05□□□□□ -1.12
SNX29-206ENST00000568359 RALGAPBQ86X10 1494 aa8.05□□□□□ -1.12
SNX29-206ENST00000568359 GLI3P10071 1580 aa8.05□□□□□ -1.12
SNX29-206ENST00000568359 RRBP1Q9P2E9 1410 aaKnown RBP8.04□□□□□ -1.12
SNX29-206ENST00000568359 ABCA3Q99758 1704 aa8.04□□□□□ -1.12
SNX29-206ENST00000568359 NWD2Q9ULI1 1742 aa8.04□□□□□ -1.12
SNX29-206ENST00000568359 A0A0G2JS52 829 aa8.04□□□□□ -1.12
SNX29-206ENST00000568359 PLEKHG5O94827 1062 aa8.04□□□□□ -1.12
SNX29-206ENST00000568359 MYT1Q01538 1121 aa8.04□□□□□ -1.12
SNX29-206ENST00000568359 STK26Q9P289 416 aa8.04□□□□□ -1.12
SNX29-206ENST00000568359 SRCAPQ6ZRS2 3230 aa8.03□□□□□ -1.12
SNX29-206ENST00000568359 RGPD8O14715 1765 aaPredicted RBP8.03□□□□□ -1.12
SNX29-206ENST00000568359 UNC5CLQ8IV45 518 aa8.03□□□□□ -1.12
SNX29-206ENST00000568359 LRP5O75197 1615 aa8.03□□□□□ -1.12
SNX29-206ENST00000568359 LMOD2Q6P5Q4 547 aa8.02□□□□□ -1.13
SNX29-206ENST00000568359 SLIT2O94813 1529 aa8.02□□□□□ -1.13
SNX29-206ENST00000568359 TECPR2O15040 1411 aa8.02□□□□□ -1.13
SNX29-206ENST00000568359 TNS3Q68CZ2 1445 aa8.02□□□□□ -1.13
SNX29-206ENST00000568359 ANKRD30BQ9BXX2 1392 aa8.01□□□□□ -1.13
SNX29-206ENST00000568359 RGL3Q3MIN7 710 aa8.01□□□□□ -1.13
SNX29-206ENST00000568359 PAXIP1Q6ZW49 1069 aaPredicted RBP8.01□□□□□ -1.13
SNX29-206ENST00000568359 SPATA31A3Q5VYP0 1347 aa8.01□□□□□ -1.13
SNX29-206ENST00000568359 RGPD1P0DJD0 1748 aa8□□□□□ -1.13
SNX29-206ENST00000568359 MSH5O43196 834 aa8□□□□□ -1.13
SNX29-206ENST00000568359 PSME1Q06323 249 aa8□□□□□ -1.13
SNX29-206ENST00000568359 WAPLQ7Z5K2 1190 aa8□□□□□ -1.13
SNX29-206ENST00000568359 DEFB132Q7Z7B7 95 aa8□□□□□ -1.13
SNX29-206ENST00000568359 SEPT12Q8IYM1 358 aa8□□□□□ -1.13
SNX29-206ENST00000568359 BBXQ8WY36 941 aaPredicted RBP8□□□□□ -1.13
SNX29-206ENST00000568359 ADGRF5Q8IZF2 1346 aa8□□□□□ -1.13
SNX29-206ENST00000568359 ARHGEF10O15013 1369 aa7.99□□□□□ -1.13
SNX29-206ENST00000568359 PLEKHH1Q9ULM0 1364 aa7.99□□□□□ -1.13
SNX29-206ENST00000568359 PIK3C2GO75747 1445 aa7.99□□□□□ -1.13
SNX29-206ENST00000568359 BAG6P46379 1132 aa7.99□□□□□ -1.13
SNX29-206ENST00000568359 KRT28Q7Z3Y7 464 aa7.99□□□□□ -1.13
SNX29-206ENST00000568359 KRT27Q7Z3Y8 459 aa7.99□□□□□ -1.13
SNX29-206ENST00000568359 KLHL34Q8N239 644 aa7.99□□□□□ -1.13
SNX29-206ENST00000568359 YTHDC2Q9H6S0 1430 aaKnown RBP7.99□□□□□ -1.13
SNX29-206ENST00000568359 TSHZ2Q9NRE2 1034 aa7.99□□□□□ -1.13
SNX29-206ENST00000568359 NRAPQ86VF7 1730 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms