RNA–Protein interactions for RNA: ENST00000567988.5

FANCA-229, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-229ENST00000567988 STK26Q9P289 416 aa17.86■□□□□ 0.45
FANCA-229ENST00000567988 ADGRB2O60241 1585 aa17.86■□□□□ 0.45
FANCA-229ENST00000567988 NHSL1Q5SYE7 1610 aa17.86■□□□□ 0.45
FANCA-229ENST00000567988 ARHGEF28Q8N1W1 1705 aaKnown RBP17.84■□□□□ 0.45
FANCA-229ENST00000567988 FMN2Q9NZ56 1722 aa17.83■□□□□ 0.44
FANCA-229ENST00000567988 PHLPP1O60346 1717 aa17.81■□□□□ 0.44
FANCA-229ENST00000567988 TRPM1Q7Z4N2 1603 aa17.81■□□□□ 0.44
FANCA-229ENST00000567988 PRAM1Q96QH2 718 aa17.81■□□□□ 0.44
FANCA-229ENST00000567988 MED1Q15648 1581 aaPredicted RBP17.8■□□□□ 0.44
FANCA-229ENST00000567988 NBPF1Q3BBV0 1214 aa17.8■□□□□ 0.44
FANCA-229ENST00000567988 GPRASP1Q5JY77 1395 aa17.79■□□□□ 0.44
FANCA-229ENST00000567988 NEUROD1Q13562 356 aa17.78■□□□□ 0.44
FANCA-229ENST00000567988 USP32Q8NFA0 1604 aa17.77■□□□□ 0.44
FANCA-229ENST00000567988 ORAI2Q96SN7 254 aa17.77■□□□□ 0.44
FANCA-229ENST00000567988 PCGF6Q9BYE7 350 aa17.77■□□□□ 0.44
FANCA-229ENST00000567988 TRAK1Q9UPV9 953 aa17.77■□□□□ 0.44
FANCA-229ENST00000567988 NBPF8Q3BBV2 869 aa17.76■□□□□ 0.43
FANCA-229ENST00000567988 SHPRHQ149N8 1683 aa17.75■□□□□ 0.43
FANCA-229ENST00000567988 JCADQ9P266 1359 aa17.75■□□□□ 0.43
FANCA-229ENST00000567988 PXDNQ92626 1479 aa17.75■□□□□ 0.43
FANCA-229ENST00000567988 SOS2Q07890 1332 aaPredicted RBP17.74■□□□□ 0.43
FANCA-229ENST00000567988 ANKARQ7Z5J8 1434 aa17.74■□□□□ 0.43
FANCA-229ENST00000567988 CLSPNQ9HAW4 1339 aa17.73■□□□□ 0.43
FANCA-229ENST00000567988 RALGAPBQ86X10 1494 aa17.72■□□□□ 0.43
FANCA-229ENST00000567988 DDX17Q92841 729 aaKnown RBP17.72■□□□□ 0.43
FANCA-229ENST00000567988 TULP4Q9NRJ4 1543 aa17.72■□□□□ 0.43
FANCA-229ENST00000567988 PRR36Q9H6K5 1346 aa17.71■□□□□ 0.42
FANCA-229ENST00000567988 KIF1AQ12756 1690 aa17.71■□□□□ 0.42
FANCA-229ENST00000567988 LRP6O75581 1613 aa17.7■□□□□ 0.42
FANCA-229ENST00000567988 SAFB2Q14151 953 aaKnown RBP eCLIP17.7■□□□□ 0.42
FANCA-229ENST00000567988 POGKQ9P215 609 aa17.7■□□□□ 0.42
FANCA-229ENST00000567988 ATP7BP35670 1465 aa17.69■□□□□ 0.42
FANCA-229ENST00000567988 TONSLQ96HA7 1378 aa17.69■□□□□ 0.42
FANCA-229ENST00000567988 PNPLA6Q8IY17 1366 aa17.68■□□□□ 0.42
FANCA-229ENST00000567988 WASLO00401 505 aaPredicted RBP17.68■□□□□ 0.42
FANCA-229ENST00000567988 RGPD8O14715 1765 aaPredicted RBP17.67■□□□□ 0.42
FANCA-229ENST00000567988 ESCO1Q5FWF5 840 aa17.67■□□□□ 0.42
FANCA-229ENST00000567988 SPATA31A6Q5VVP1 1343 aa17.67■□□□□ 0.42
FANCA-229ENST00000567988 MINK1Q8N4C8 1332 aaPredicted RBP17.67■□□□□ 0.42
FANCA-229ENST00000567988 DISP3Q9P2K9 1392 aa17.66■□□□□ 0.42
FANCA-229ENST00000567988 COL22A1Q8NFW1 1626 aaPredicted RBP17.66■□□□□ 0.42
FANCA-229ENST00000567988 HIRIP3Q9BW71 556 aaPredicted RBP17.66■□□□□ 0.42
FANCA-229ENST00000567988 NPHP3Q7Z494 1330 aa17.66■□□□□ 0.42
FANCA-229ENST00000567988 ROCK2O75116 1388 aaKnown RBP17.66■□□□□ 0.42
FANCA-229ENST00000567988 TOPAZ1Q8N9V7 1692 aa17.65■□□□□ 0.42
FANCA-229ENST00000567988 NUTM2FA1L443 756 aa17.65■□□□□ 0.42
FANCA-229ENST00000567988 LRRC59Q96AG4 307 aaKnown RBP17.65■□□□□ 0.42
FANCA-229ENST00000567988 EIF3AQ14152 1382 aaKnown RBP17.65■□□□□ 0.42
FANCA-229ENST00000567988 RGS17Q9UGC6 210 aaPredicted RBP17.64■□□□□ 0.41
FANCA-229ENST00000567988 CENPJQ9HC77 1338 aaPredicted RBP17.64■□□□□ 0.41
FANCA-229ENST00000567988 QRICH2Q9H0J4 1663 aa17.64■□□□□ 0.41
FANCA-229ENST00000567988 SBNO2Q9Y2G9 1366 aa17.63■□□□□ 0.41
FANCA-229ENST00000567988 FOXO3O43524 673 aa17.62■□□□□ 0.41
FANCA-229ENST00000567988 TIMELESSQ9UNS1 1208 aa17.62■□□□□ 0.41
FANCA-229ENST00000567988 PHF8Q9UPP1 1060 aa17.62■□□□□ 0.41
FANCA-229ENST00000567988 TRPM3Q9HCF6 1732 aaPredicted RBP17.61■□□□□ 0.41
FANCA-229ENST00000567988 SPATA31A3Q5VYP0 1347 aa17.59■□□□□ 0.41
FANCA-229ENST00000567988 ILDR2Q71H61 639 aa17.59■□□□□ 0.41
FANCA-229ENST00000567988 CDK19Q9BWU1 502 aa17.59■□□□□ 0.41
FANCA-229ENST00000567988 ITSN1Q15811 1721 aa17.58■□□□□ 0.41
FANCA-229ENST00000567988 SBNO1A3KN83 1393 aa17.58■□□□□ 0.4
FANCA-229ENST00000567988 POLR3AO14802 1390 aaPredicted RBP17.58■□□□□ 0.4
FANCA-229ENST00000567988 NUDT16Q96DE0 195 aaKnown RBP17.58■□□□□ 0.4
FANCA-229ENST00000567988 TNS3Q68CZ2 1445 aa17.56■□□□□ 0.4
FANCA-229ENST00000567988 ALS2Q96Q42 1657 aa17.56■□□□□ 0.4
FANCA-229ENST00000567988 PLEKHG3A1L390 1219 aa17.56■□□□□ 0.4
FANCA-229ENST00000567988 XPCQ01831 940 aaPredicted RBP17.56■□□□□ 0.4
FANCA-229ENST00000567988 KRT28Q7Z3Y7 464 aa17.55■□□□□ 0.4
FANCA-229ENST00000567988 CARD11Q9BXL7 1154 aa17.55■□□□□ 0.4
FANCA-229ENST00000567988 PMFBP1Q8TBY8 1022 aa17.54■□□□□ 0.4
FANCA-229ENST00000567988 CCDC61Q9Y6R9 512 aa17.53■□□□□ 0.4
FANCA-229ENST00000567988 TESK2Q96S53 571 aa17.51■□□□□ 0.39
FANCA-229ENST00000567988 ABCA3Q99758 1704 aa17.51■□□□□ 0.39
FANCA-229ENST00000567988 CABP2Q9NPB3 220 aa17.51■□□□□ 0.39
FANCA-229ENST00000567988 CRYBG1Q9Y4K1 1723 aa17.51■□□□□ 0.39
FANCA-229ENST00000567988 POTEAQ6S8J7 498 aa17.5■□□□□ 0.39
FANCA-229ENST00000567988 PPIP5K1Q6PFW1 1433 aa17.49■□□□□ 0.39
FANCA-229ENST00000567988 SSH2Q76I76 1423 aa17.49■□□□□ 0.39
FANCA-229ENST00000567988 PSME1Q06323 249 aa17.49■□□□□ 0.39
FANCA-229ENST00000567988 ARHGEF10O15013 1369 aa17.49■□□□□ 0.39
FANCA-229ENST00000567988 ACEP12821 1306 aa17.48■□□□□ 0.39
FANCA-229ENST00000567988 EVC2Q86UK5 1308 aa17.48■□□□□ 0.39
FANCA-229ENST00000567988 CCER1Q8TC90 406 aaPredicted RBP17.48■□□□□ 0.39
FANCA-229ENST00000567988 PHF23Q9BUL5 403 aaPredicted RBP17.47■□□□□ 0.39
FANCA-229ENST00000567988 MARF1Q9Y4F3 1742 aaKnown RBP17.47■□□□□ 0.39
FANCA-229ENST00000567988 NUTM2BA6NNL0 878 aaPredicted RBP17.46■□□□□ 0.39
FANCA-229ENST00000567988 NUTM2EB1AL46 878 aaPredicted RBP17.46■□□□□ 0.39
FANCA-229ENST00000567988 SRPK2P78362 688 aaKnown RBP17.46■□□□□ 0.39
FANCA-229ENST00000567988 NUTM2AQ8IVF1 878 aaPredicted RBP17.46■□□□□ 0.39
FANCA-229ENST00000567988 CPSF1Q10570 1443 aaKnown RBP17.46■□□□□ 0.39
FANCA-229ENST00000567988 CD163L1Q9NR16 1453 aa17.45■□□□□ 0.38
FANCA-229ENST00000567988 BRD4O60885 1362 aaPredicted RBP17.45■□□□□ 0.38
FANCA-229ENST00000567988 USP47Q96K76 1375 aa17.45■□□□□ 0.38
FANCA-229ENST00000567988 FNBP4Q8N3X1 1017 aaPredicted RBP17.45■□□□□ 0.38
FANCA-229ENST00000567988 NGDNQ8NEJ9 315 aaKnown RBP17.45■□□□□ 0.38
FANCA-229ENST00000567988 PUS7Q96PZ0 661 aaKnown RBP17.45■□□□□ 0.38
FANCA-229ENST00000567988 ATAD2Q6PL18 1390 aa17.44■□□□□ 0.38
FANCA-229ENST00000567988 SLIT2O94813 1529 aa17.44■□□□□ 0.38
FANCA-229ENST00000567988 ST20-MTHFSA0A0A6YYL1 179 aa17.44■□□□□ 0.38
FANCA-229ENST00000567988 USP6P35125 1406 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms