RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 SPATA31A6Q5VVP1 1343 aa16.08■□□□□ 0.16
LINC01228-201ENST00000567966 STAC3Q96MF2 364 aa16.07■□□□□ 0.16
LINC01228-201ENST00000567966 PRAG1Q86YV5 1406 aa16.07■□□□□ 0.16
LINC01228-201ENST00000567966 C1orf167Q5SNV9 1468 aa16.07■□□□□ 0.16
LINC01228-201ENST00000567966 NUTM2BA6NNL0 878 aaPredicted RBP16.06■□□□□ 0.16
LINC01228-201ENST00000567966 NUTM2EB1AL46 878 aaPredicted RBP16.06■□□□□ 0.16
LINC01228-201ENST00000567966 NUTM2AQ8IVF1 878 aaPredicted RBP16.06■□□□□ 0.16
LINC01228-201ENST00000567966 DHX57Q6P158 1386 aaKnown RBP16.05■□□□□ 0.16
LINC01228-201ENST00000567966 MEX3CQ5U5Q3 659 aaKnown RBP16.04■□□□□ 0.16
LINC01228-201ENST00000567966 TMEM132EQ6IEE7 984 aa16.04■□□□□ 0.16
LINC01228-201ENST00000567966 ORAI2Q96SN7 254 aa16.04■□□□□ 0.16
LINC01228-201ENST00000567966 STK26Q9P289 416 aa16.04■□□□□ 0.16
LINC01228-201ENST00000567966 CLSPNQ9HAW4 1339 aa16.02■□□□□ 0.16
LINC01228-201ENST00000567966 WAPLQ7Z5K2 1190 aa16.02■□□□□ 0.16
LINC01228-201ENST00000567966 LRRC59Q96AG4 307 aaKnown RBP16.01■□□□□ 0.15
LINC01228-201ENST00000567966 PIK3C2GO75747 1445 aa16.01■□□□□ 0.15
LINC01228-201ENST00000567966 LAMC1P11047 1609 aa16.01■□□□□ 0.15
LINC01228-201ENST00000567966 PNPLA6Q8IY17 1366 aa16■□□□□ 0.15
LINC01228-201ENST00000567966 LRPPRCP42704 1394 aaKnown RBP16■□□□□ 0.15
LINC01228-201ENST00000567966 PLEKHH1Q9ULM0 1364 aa16■□□□□ 0.15
LINC01228-201ENST00000567966 KNDC1Q76NI1 1749 aa15.99■□□□□ 0.15
LINC01228-201ENST00000567966 TECPR2O15040 1411 aa15.98■□□□□ 0.15
LINC01228-201ENST00000567966 CDC42BPGQ6DT37 1551 aa15.98■□□□□ 0.15
LINC01228-201ENST00000567966 NUTM2FA1L443 756 aa15.97■□□□□ 0.15
LINC01228-201ENST00000567966 ABCC11Q96J66 1382 aa15.97■□□□□ 0.15
LINC01228-201ENST00000567966 AFF2P51816 1311 aa15.96■□□□□ 0.15
LINC01228-201ENST00000567966 SOS2Q07890 1332 aaPredicted RBP15.96■□□□□ 0.15
LINC01228-201ENST00000567966 YTHDC2Q9H6S0 1430 aaKnown RBP15.96■□□□□ 0.15
LINC01228-201ENST00000567966 CFAP70Q5T0N1 1121 aa15.96■□□□□ 0.15
LINC01228-201ENST00000567966 ZNF772Q68DY9 489 aaPredicted RBP15.96■□□□□ 0.15
LINC01228-201ENST00000567966 ESCO1Q5FWF5 840 aa15.95■□□□□ 0.14
LINC01228-201ENST00000567966 C14orf93Q9H972 538 aaKnown RBP15.95■□□□□ 0.14
LINC01228-201ENST00000567966 NRXN1Q9ULB1 1477 aa15.95■□□□□ 0.14
LINC01228-201ENST00000567966 MYOM2P54296 1465 aa15.93■□□□□ 0.14
LINC01228-201ENST00000567966 ADAMTS2O95450 1211 aa15.93■□□□□ 0.14
LINC01228-201ENST00000567966 C8orf37Q96NL8 207 aa15.93■□□□□ 0.14
LINC01228-201ENST00000567966 SIN3AQ96ST3 1273 aa15.93■□□□□ 0.14
LINC01228-201ENST00000567966 TIMELESSQ9UNS1 1208 aa15.93■□□□□ 0.14
LINC01228-201ENST00000567966 FMN2Q9NZ56 1722 aa15.93■□□□□ 0.14
LINC01228-201ENST00000567966 XPCQ01831 940 aaPredicted RBP15.92■□□□□ 0.14
LINC01228-201ENST00000567966 PXDNQ92626 1479 aa15.91■□□□□ 0.14
LINC01228-201ENST00000567966 RGPD8O14715 1765 aaPredicted RBP15.91■□□□□ 0.14
LINC01228-201ENST00000567966 FOXO3O43524 673 aa15.91■□□□□ 0.14
LINC01228-201ENST00000567966 RXRBP28702 533 aa15.91■□□□□ 0.14
LINC01228-201ENST00000567966 NEUROD1Q13562 356 aa15.91■□□□□ 0.14
LINC01228-201ENST00000567966 CCER1Q8TC90 406 aaPredicted RBP15.91■□□□□ 0.14
LINC01228-201ENST00000567966 DCAF11Q8TEB1 546 aa15.91■□□□□ 0.14
LINC01228-201ENST00000567966 NPHP3Q7Z494 1330 aa15.9■□□□□ 0.14
LINC01228-201ENST00000567966 COL22A1Q8NFW1 1626 aaPredicted RBP15.9■□□□□ 0.14
LINC01228-201ENST00000567966 SIRT1Q96EB6 747 aa15.89■□□□□ 0.13
LINC01228-201ENST00000567966 SAFB2Q14151 953 aaKnown RBP eCLIP15.88■□□□□ 0.13
LINC01228-201ENST00000567966 L3MBTL2Q969R5 705 aa15.88■□□□□ 0.13
LINC01228-201ENST00000567966 NGLY1Q96IV0 654 aa15.88■□□□□ 0.13
LINC01228-201ENST00000567966 QTRT2Q9H974 415 aaKnown RBP15.88■□□□□ 0.13
LINC01228-201ENST00000567966 KDM2AQ9Y2K7 1162 aa15.88■□□□□ 0.13
LINC01228-201ENST00000567966 ZEB1P37275 1124 aaPredicted RBP15.87■□□□□ 0.13
LINC01228-201ENST00000567966 PRAM1Q96QH2 718 aa15.87■□□□□ 0.13
LINC01228-201ENST00000567966 ADGRB1O14514 1584 aa15.86■□□□□ 0.13
LINC01228-201ENST00000567966 UPF1Q92900 1129 aaKnown RBP eCLIP15.85■□□□□ 0.13
LINC01228-201ENST00000567966 CDK12Q9NYV4 1490 aaPredicted RBP15.84■□□□□ 0.13
LINC01228-201ENST00000567966 KIF1AQ12756 1690 aa15.84■□□□□ 0.13
LINC01228-201ENST00000567966 TRAK1Q9UPV9 953 aa15.84■□□□□ 0.13
LINC01228-201ENST00000567966 RGS12O14924 1447 aa15.84■□□□□ 0.13
LINC01228-201ENST00000567966 MARF1Q9Y4F3 1742 aaKnown RBP15.83■□□□□ 0.13
LINC01228-201ENST00000567966 RBM6P78332 1123 aaKnown RBP15.83■□□□□ 0.12
LINC01228-201ENST00000567966 DLC1Q96QB1 1528 aa15.83■□□□□ 0.12
LINC01228-201ENST00000567966 USP32Q8NFA0 1604 aa15.83■□□□□ 0.12
LINC01228-201ENST00000567966 KRT28Q7Z3Y7 464 aa15.82■□□□□ 0.12
LINC01228-201ENST00000567966 POGKQ9P215 609 aa15.82■□□□□ 0.12
LINC01228-201ENST00000567966 USP21Q9UK80 565 aa15.82■□□□□ 0.12
LINC01228-201ENST00000567966 SPATA31A3Q5VYP0 1347 aa15.82■□□□□ 0.12
LINC01228-201ENST00000567966 TONSLQ96HA7 1378 aa15.82■□□□□ 0.12
LINC01228-201ENST00000567966 FNBP4Q8N3X1 1017 aaPredicted RBP15.81■□□□□ 0.12
LINC01228-201ENST00000567966 PHF8Q9UPP1 1060 aa15.81■□□□□ 0.12
LINC01228-201ENST00000567966 ZBTB22O15209 634 aa15.8■□□□□ 0.12
LINC01228-201ENST00000567966 HIRIP3Q9BW71 556 aaPredicted RBP15.8■□□□□ 0.12
LINC01228-201ENST00000567966 ADGRB2O60241 1585 aa15.79■□□□□ 0.12
LINC01228-201ENST00000567966 MINK1Q8N4C8 1332 aaPredicted RBP15.79■□□□□ 0.12
LINC01228-201ENST00000567966 BCL9LQ86UU0 1499 aa15.78■□□□□ 0.12
LINC01228-201ENST00000567966 ATRNO75882 1429 aa15.78■□□□□ 0.12
LINC01228-201ENST00000567966 SLC4A2P04920 1241 aa15.78■□□□□ 0.12
LINC01228-201ENST00000567966 PMFBP1Q8TBY8 1022 aa15.78■□□□□ 0.12
LINC01228-201ENST00000567966 PLEKHG5O94827 1062 aa15.77■□□□□ 0.12
LINC01228-201ENST00000567966 TRPC5Q9UL62 973 aaPredicted RBP15.77■□□□□ 0.12
LINC01228-201ENST00000567966 PRR36Q9H6K5 1346 aa15.76■□□□□ 0.11
LINC01228-201ENST00000567966 CABLES1Q8TDN4 633 aa15.76■□□□□ 0.11
LINC01228-201ENST00000567966 ARHGEF28Q8N1W1 1705 aaKnown RBP15.76■□□□□ 0.11
LINC01228-201ENST00000567966 TNS3Q68CZ2 1445 aa15.76■□□□□ 0.11
LINC01228-201ENST00000567966 FOXD4L1Q9NU39 408 aa15.75■□□□□ 0.11
LINC01228-201ENST00000567966 ANKARQ7Z5J8 1434 aa15.75■□□□□ 0.11
LINC01228-201ENST00000567966 PSME1Q06323 249 aa15.74■□□□□ 0.11
LINC01228-201ENST00000567966 ABCA3Q99758 1704 aa15.74■□□□□ 0.11
LINC01228-201ENST00000567966 TRPM3Q9HCF6 1732 aaPredicted RBP15.74■□□□□ 0.11
LINC01228-201ENST00000567966 LMOD2Q6P5Q4 547 aa15.73■□□□□ 0.11
LINC01228-201ENST00000567966 SBNO1A3KN83 1393 aa15.73■□□□□ 0.11
LINC01228-201ENST00000567966 SLIT2O94813 1529 aa15.73■□□□□ 0.11
LINC01228-201ENST00000567966 WASLO00401 505 aaPredicted RBP15.72■□□□□ 0.11
LINC01228-201ENST00000567966 TULP4Q9NRJ4 1543 aa15.72■□□□□ 0.11
LINC01228-201ENST00000567966 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.71■□□□□ 0.11
LINC01228-201ENST00000567966 HAP1P54257 671 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms