RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 NRXN3Q9Y4C0 1643 aa21.51■■□□□ 1.03
SMG1-213ENST00000567737 ORAI2Q96SN7 254 aa21.5■■□□□ 1.03
SMG1-213ENST00000567737 COL22A1Q8NFW1 1626 aaPredicted RBP21.5■■□□□ 1.03
SMG1-213ENST00000567737 E9PCH4 1651 aa21.49■■□□□ 1.03
SMG1-213ENST00000567737 MYOM2P54296 1465 aa21.48■■□□□ 1.03
SMG1-213ENST00000567737 APLP2Q06481 763 aa21.45■■□□□ 1.02
SMG1-213ENST00000567737 ZNF326Q5BKZ1 582 aaKnown RBP21.45■■□□□ 1.02
SMG1-213ENST00000567737 PSDA5PKW4 1024 aaPredicted RBP21.43■■□□□ 1.02
SMG1-213ENST00000567737 IQGAP3Q86VI3 1631 aa21.43■■□□□ 1.02
SMG1-213ENST00000567737 HRCP23327 699 aa21.42■■□□□ 1.02
SMG1-213ENST00000567737 NPHP3Q7Z494 1330 aa21.42■■□□□ 1.02
SMG1-213ENST00000567737 RALGAPBQ86X10 1494 aa21.42■■□□□ 1.02
SMG1-213ENST00000567737 UNC5CLQ8IV45 518 aa21.42■■□□□ 1.02
SMG1-213ENST00000567737 MARF1Q9Y4F3 1742 aaKnown RBP21.41■■□□□ 1.02
SMG1-213ENST00000567737 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.4■■□□□ 1.02
SMG1-213ENST00000567737 GLI3P10071 1580 aa21.4■■□□□ 1.02
SMG1-213ENST00000567737 SPHKAPQ2M3C7 1700 aa21.39■■□□□ 1.01
SMG1-213ENST00000567737 FAM50AQ14320 339 aaKnown RBP21.39■■□□□ 1.01
SMG1-213ENST00000567737 BAG6P46379 1132 aa21.37■■□□□ 1.01
SMG1-213ENST00000567737 SEPT12Q8IYM1 358 aa21.37■■□□□ 1.01
SMG1-213ENST00000567737 ESCO1Q5FWF5 840 aa21.36■■□□□ 1.01
SMG1-213ENST00000567737 SLIT2O94813 1529 aa21.35■■□□□ 1.01
SMG1-213ENST00000567737 BRWD3Q6RI45 1802 aa21.34■■□□□ 1.01
SMG1-213ENST00000567737 PXDNQ92626 1479 aa21.34■■□□□ 1.01
SMG1-213ENST00000567737 ROBO2Q9HCK4 1378 aa21.34■■□□□ 1.01
SMG1-213ENST00000567737 XPCQ01831 940 aaPredicted RBP21.33■■□□□ 1.01
SMG1-213ENST00000567737 NUP155O75694 1391 aa21.33■■□□□ 1
SMG1-213ENST00000567737 YY1P25490 414 aa21.32■■□□□ 1
SMG1-213ENST00000567737 KRT27Q7Z3Y8 459 aa21.32■■□□□ 1
SMG1-213ENST00000567737 LRPPRCP42704 1394 aaKnown RBP21.32■■□□□ 1
SMG1-213ENST00000567737 FOXO3O43524 673 aa21.31■■□□□ 1
SMG1-213ENST00000567737 CCDC9Q9Y3X0 531 aaKnown RBP21.29■■□□□ 1
SMG1-213ENST00000567737 NEXMIFQ5QGS0 1516 aa21.29■■□□□ 1
SMG1-213ENST00000567737 HFM1A2PYH4 1435 aa21.29■■□□□ 1
SMG1-213ENST00000567737 VPS72Q15906 364 aa21.28■■□□□ 1
SMG1-213ENST00000567737 A0A0G2JS52 829 aa21.26■□□□□ 0.99
SMG1-213ENST00000567737 ONECUT3O60422 494 aaPredicted RBP21.26■□□□□ 0.99
SMG1-213ENST00000567737 MYT1Q01538 1121 aa21.26■□□□□ 0.99
SMG1-213ENST00000567737 R3HDM1Q15032 1099 aaKnown RBP21.26■□□□□ 0.99
SMG1-213ENST00000567737 PRAG1Q86YV5 1406 aa21.26■□□□□ 0.99
SMG1-213ENST00000567737 HAP1P54257 671 aaPredicted RBP21.25■□□□□ 0.99
SMG1-213ENST00000567737 CDC42BPGQ6DT37 1551 aa21.24■□□□□ 0.99
SMG1-213ENST00000567737 USP32Q8NFA0 1604 aa21.23■□□□□ 0.99
SMG1-213ENST00000567737 EN1Q05925 392 aaPredicted RBP21.23■□□□□ 0.99
SMG1-213ENST00000567737 LOC105371045A0A1W2PR82 267 aa21.22■□□□□ 0.99
SMG1-213ENST00000567737 VGFO15240 615 aaPredicted RBP21.22■□□□□ 0.99
SMG1-213ENST00000567737 SPATA31A3Q5VYP0 1347 aa21.22■□□□□ 0.99
SMG1-213ENST00000567737 ROCK1Q13464 1354 aa21.22■□□□□ 0.99
SMG1-213ENST00000567737 NUTM2FA1L443 756 aa21.19■□□□□ 0.98
SMG1-213ENST00000567737 CCDC144AA2RUR9 1427 aa21.17■□□□□ 0.98
SMG1-213ENST00000567737 CLTCL1P53675 1640 aa21.16■□□□□ 0.98
SMG1-213ENST00000567737 POTEDQ86YR6 584 aa21.16■□□□□ 0.98
SMG1-213ENST00000567737 NWD2Q9ULI1 1742 aa21.15■□□□□ 0.98
SMG1-213ENST00000567737 PLCH1Q4KWH8 1693 aa21.15■□□□□ 0.98
SMG1-213ENST00000567737 NAIPQ13075 1403 aa21.15■□□□□ 0.98
SMG1-213ENST00000567737 KRT28Q7Z3Y7 464 aa21.15■□□□□ 0.98
SMG1-213ENST00000567737 RGPD1P0DJD0 1748 aa21.15■□□□□ 0.98
SMG1-213ENST00000567737 FAM98CQ17RN3 349 aaKnown RBP21.14■□□□□ 0.97
SMG1-213ENST00000567737 DCAF8L1A6NGE4 600 aa21.13■□□□□ 0.97
SMG1-213ENST00000567737 PLEKHG5O94827 1062 aa21.13■□□□□ 0.97
SMG1-213ENST00000567737 CABLES1Q8TDN4 633 aa21.13■□□□□ 0.97
SMG1-213ENST00000567737 DISP2A7MBM2 1401 aa21.12■□□□□ 0.97
SMG1-213ENST00000567737 KIF1BO60333 1816 aa21.12■□□□□ 0.97
SMG1-213ENST00000567737 EZH2Q15910 746 aaKnown RBP21.11■□□□□ 0.97
SMG1-213ENST00000567737 KIF1AQ12756 1690 aa21.11■□□□□ 0.97
SMG1-213ENST00000567737 TNS3Q68CZ2 1445 aa21.11■□□□□ 0.97
SMG1-213ENST00000567737 PSME1Q06323 249 aa21.1■□□□□ 0.97
SMG1-213ENST00000567737 RPGRIP1LQ68CZ1 1315 aa21.09■□□□□ 0.97
SMG1-213ENST00000567737 FAM182BQ5T319 152 aa21.09■□□□□ 0.97
SMG1-213ENST00000567737 FAM83GA6ND36 823 aa21.07■□□□□ 0.96
SMG1-213ENST00000567737 LMOD2Q6P5Q4 547 aa21.07■□□□□ 0.96
SMG1-213ENST00000567737 WAPLQ7Z5K2 1190 aa21.07■□□□□ 0.96
SMG1-213ENST00000567737 PPP1R1BQ9UD71 204 aaPredicted RBP21.06■□□□□ 0.96
SMG1-213ENST00000567737 ADGRB2O60241 1585 aa21.06■□□□□ 0.96
SMG1-213ENST00000567737 STK26Q9P289 416 aa21.05■□□□□ 0.96
SMG1-213ENST00000567737 CAMKK2Q96RR4 588 aa21.04■□□□□ 0.96
SMG1-213ENST00000567737 ARHGEF10O15013 1369 aa21.04■□□□□ 0.96
SMG1-213ENST00000567737 TNS1Q9HBL0 1735 aaKnown RBP21.04■□□□□ 0.96
SMG1-213ENST00000567737 ITGAEP38570 1179 aa21.03■□□□□ 0.96
SMG1-213ENST00000567737 BTG4Q9NY30 223 aa21.03■□□□□ 0.96
SMG1-213ENST00000567737 SBNO1A3KN83 1393 aa21.02■□□□□ 0.96
SMG1-213ENST00000567737 PARD3Q8TEW0 1356 aa21.02■□□□□ 0.96
SMG1-213ENST00000567737 FMN2Q9NZ56 1722 aa21.02■□□□□ 0.96
SMG1-213ENST00000567737 PHF8Q9UPP1 1060 aa21.02■□□□□ 0.96
SMG1-213ENST00000567737 TECPR2O15040 1411 aa21.02■□□□□ 0.96
SMG1-213ENST00000567737 NRAPQ86VF7 1730 aa21.01■□□□□ 0.95
SMG1-213ENST00000567737 ABCA3Q99758 1704 aa21.01■□□□□ 0.95
SMG1-213ENST00000567737 TRIM37O94972 964 aa21■□□□□ 0.95
SMG1-213ENST00000567737 APBA3O96018 575 aa20.99■□□□□ 0.95
SMG1-213ENST00000567737 NBPF8Q3BBV2 869 aa20.99■□□□□ 0.95
SMG1-213ENST00000567737 NBPF14Q5TI25 921 aa20.99■□□□□ 0.95
SMG1-213ENST00000567737 SPATA31A5Q5VU36 1347 aa20.99■□□□□ 0.95
SMG1-213ENST00000567737 SPATA31A7Q8IWB4 1347 aa20.99■□□□□ 0.95
SMG1-213ENST00000567737 PLEKHH1Q9ULM0 1364 aa20.98■□□□□ 0.95
SMG1-213ENST00000567737 NINLQ9Y2I6 1382 aa20.98■□□□□ 0.95
SMG1-213ENST00000567737 IFFO2Q5TF58 517 aa20.98■□□□□ 0.95
SMG1-213ENST00000567737 FAM196AQ6ZSG2 479 aa20.98■□□□□ 0.95
SMG1-213ENST00000567737 SPON1Q9HCB6 807 aa20.98■□□□□ 0.95
SMG1-213ENST00000567737 PPLO60437 1756 aa20.97■□□□□ 0.95
SMG1-213ENST00000567737 ABCC11Q96J66 1382 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms