RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 POLR3EQ9NVU0 708 aa18.1■□□□□ 0.49
NIFKP4-201ENST00000567275 ATP1B4Q9UN42 357 aaPredicted RBP18.1■□□□□ 0.49
NIFKP4-201ENST00000567275 C6orf229H3BNL8 230 aa18.09■□□□□ 0.49
NIFKP4-201ENST00000567275 CLK2P49760 499 aaKnown RBP18.09■□□□□ 0.49
NIFKP4-201ENST00000567275 SH3D19Q5HYK7 790 aa18.08■□□□□ 0.48
NIFKP4-201ENST00000567275 A0A0G2JS52 829 aa18.07■□□□□ 0.48
NIFKP4-201ENST00000567275 GGCXP38435 758 aa18.07■□□□□ 0.48
NIFKP4-201ENST00000567275 CSPP1Q1MSJ5 1256 aa18.07■□□□□ 0.48
NIFKP4-201ENST00000567275 SLC6A16Q9GZN6 736 aa18.07■□□□□ 0.48
NIFKP4-201ENST00000567275 LIMD1Q9UGP4 676 aa18.07■□□□□ 0.48
NIFKP4-201ENST00000567275 SKIV2LQ15477 1246 aaKnown RBP18.06■□□□□ 0.48
NIFKP4-201ENST00000567275 SYMPKQ92797 1274 aaKnown RBP18.06■□□□□ 0.48
NIFKP4-201ENST00000567275 USB1Q9BQ65 265 aaKnown RBP18.06■□□□□ 0.48
NIFKP4-201ENST00000567275 PCDHB15Q9Y5E8 787 aa18.05■□□□□ 0.48
NIFKP4-201ENST00000567275 S1PR4O95977 384 aa18.03■□□□□ 0.48
NIFKP4-201ENST00000567275 MTMR2Q13614 643 aa18.03■□□□□ 0.48
NIFKP4-201ENST00000567275 PPP1R18Q6NYC8 613 aa18.03■□□□□ 0.48
NIFKP4-201ENST00000567275 RETREG3Q86VR2 466 aa18.02■□□□□ 0.48
NIFKP4-201ENST00000567275 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.02■□□□□ 0.48
NIFKP4-201ENST00000567275 MSS51Q4VC12 460 aa18.01■□□□□ 0.47
NIFKP4-201ENST00000567275 FAM160A2Q8N612 972 aaPredicted RBP18.01■□□□□ 0.47
NIFKP4-201ENST00000567275 ZBTB3Q9H5J0 574 aa18.01■□□□□ 0.47
NIFKP4-201ENST00000567275 TUSC1Q2TAM9 212 aa18■□□□□ 0.47
NIFKP4-201ENST00000567275 SPDYE5A6NIY4 337 aa17.99■□□□□ 0.47
NIFKP4-201ENST00000567275 PRPF38BQ5VTL8 546 aaKnown RBP17.99■□□□□ 0.47
NIFKP4-201ENST00000567275 NUTM2BA6NNL0 878 aaPredicted RBP17.98■□□□□ 0.47
NIFKP4-201ENST00000567275 NUTM2EB1AL46 878 aaPredicted RBP17.98■□□□□ 0.47
NIFKP4-201ENST00000567275 NUTM2DQ5VT03 806 aaPredicted RBP17.98■□□□□ 0.47
NIFKP4-201ENST00000567275 NUTM2AQ8IVF1 878 aaPredicted RBP17.98■□□□□ 0.47
NIFKP4-201ENST00000567275 HRCP23327 699 aa17.97■□□□□ 0.47
NIFKP4-201ENST00000567275 PCMTD1Q96MG8 357 aaPredicted RBP17.97■□□□□ 0.47
NIFKP4-201ENST00000567275 GOPCQ9HD26 462 aa17.97■□□□□ 0.47
NIFKP4-201ENST00000567275 PRDM9Q9NQV7 894 aa17.97■□□□□ 0.47
NIFKP4-201ENST00000567275 CABLES1Q8TDN4 633 aa17.96■□□□□ 0.47
NIFKP4-201ENST00000567275 PROCA1Q8NCQ7 364 aaPredicted RBP17.95■□□□□ 0.46
NIFKP4-201ENST00000567275 QPCTQ16769 361 aa17.94■□□□□ 0.46
NIFKP4-201ENST00000567275 RNF223E7ERA6 249 aa17.93■□□□□ 0.46
NIFKP4-201ENST00000567275 PRR7Q8TB68 274 aa17.93■□□□□ 0.46
NIFKP4-201ENST00000567275 LILRB3O75022 631 aa17.92■□□□□ 0.46
NIFKP4-201ENST00000567275 PPEF1O14829 653 aaPredicted RBP17.91■□□□□ 0.46
NIFKP4-201ENST00000567275 MMP16P51512 607 aa17.89■□□□□ 0.45
NIFKP4-201ENST00000567275 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.89■□□□□ 0.45
NIFKP4-201ENST00000567275 JUNDP17535 347 aa17.88■□□□□ 0.45
NIFKP4-201ENST00000567275 ANKLE1Q8NAG6 615 aa17.88■□□□□ 0.45
NIFKP4-201ENST00000567275 DXOO77932 396 aaKnown RBP17.87■□□□□ 0.45
NIFKP4-201ENST00000567275 RTL5Q5HYW3 569 aaPredicted RBP17.86■□□□□ 0.45
NIFKP4-201ENST00000567275 TSC1Q92574 1164 aa17.86■□□□□ 0.45
NIFKP4-201ENST00000567275 FCF1Q9Y324 198 aaKnown RBP17.86■□□□□ 0.45
NIFKP4-201ENST00000567275 CFAP99D6REC4 459 aa17.85■□□□□ 0.45
NIFKP4-201ENST00000567275 DESI1Q6ICB0 168 aa17.82■□□□□ 0.44
NIFKP4-201ENST00000567275 CCDC24Q8N4L8 307 aa17.8■□□□□ 0.44
NIFKP4-201ENST00000567275 HELBQ8NG08 1087 aaPredicted RBP17.8■□□□□ 0.44
NIFKP4-201ENST00000567275 PPP2R2DQ66LE6 453 aa17.79■□□□□ 0.44
NIFKP4-201ENST00000567275 RGS20O76081 388 aa17.78■□□□□ 0.44
NIFKP4-201ENST00000567275 NUDT12Q9BQG2 462 aa17.78■□□□□ 0.44
NIFKP4-201ENST00000567275 PTPRNQ16849 979 aa17.76■□□□□ 0.43
NIFKP4-201ENST00000567275 FBXO31Q5XUX0 539 aaPredicted RBP17.76■□□□□ 0.43
NIFKP4-201ENST00000567275 PRKD2Q9BZL6 878 aa17.75■□□□□ 0.43
NIFKP4-201ENST00000567275 PLA2G2CQ5R387 149 aa17.74■□□□□ 0.43
NIFKP4-201ENST00000567275 CCNYL3P0C7X3 344 aa17.73■□□□□ 0.43
NIFKP4-201ENST00000567275 RFC5P40937 340 aa17.73■□□□□ 0.43
NIFKP4-201ENST00000567275 LYPD8Q6UX82 237 aa17.73■□□□□ 0.43
NIFKP4-201ENST00000567275 ZBTB24O43167 697 aaPredicted RBP17.72■□□□□ 0.43
NIFKP4-201ENST00000567275 SLC19A1P41440 591 aa17.72■□□□□ 0.43
NIFKP4-201ENST00000567275 TMEM132AQ24JP5 1023 aa17.71■□□□□ 0.43
NIFKP4-201ENST00000567275 AP1G2O75843 785 aa17.7■□□□□ 0.42
NIFKP4-201ENST00000567275 V9GY48 417 aaPredicted RBP17.7■□□□□ 0.42
NIFKP4-201ENST00000567275 CTDSPL2Q05D32 466 aa17.68■□□□□ 0.42
NIFKP4-201ENST00000567275 LIAT1Q6ZQX7 453 aa17.68■□□□□ 0.42
NIFKP4-201ENST00000567275 PER1O15534 1290 aaPredicted RBP17.67■□□□□ 0.42
NIFKP4-201ENST00000567275 CTHP32929 405 aa17.66■□□□□ 0.42
NIFKP4-201ENST00000567275 EVA1BQ9NVM1 165 aa17.66■□□□□ 0.42
NIFKP4-201ENST00000567275 RPIAP49247 311 aa17.65■□□□□ 0.42
NIFKP4-201ENST00000567275 TMEM259Q4ZIN3 620 aa17.65■□□□□ 0.42
NIFKP4-201ENST00000567275 EMID1Q96A84 441 aaPredicted RBP17.65■□□□□ 0.42
NIFKP4-201ENST00000567275 KCNH2Q12809 1159 aa17.63■□□□□ 0.41
NIFKP4-201ENST00000567275 CD2BP2O95400 341 aaKnown RBP17.62■□□□□ 0.41
NIFKP4-201ENST00000567275 SPRYD7Q5W111 196 aa17.61■□□□□ 0.41
NIFKP4-201ENST00000567275 PTCRAQ6ISU1 281 aaPredicted RBP17.6■□□□□ 0.41
NIFKP4-201ENST00000567275 USP17L8P0C7I0 530 aa17.59■□□□□ 0.41
NIFKP4-201ENST00000567275 MAP10Q9P2G4 905 aa17.59■□□□□ 0.41
NIFKP4-201ENST00000567275 F12P00748 615 aaPredicted RBP17.58■□□□□ 0.4
NIFKP4-201ENST00000567275 TRIM32Q13049 653 aa17.58■□□□□ 0.4
NIFKP4-201ENST00000567275 LRRN4Q8WUT4 740 aa17.58■□□□□ 0.4
NIFKP4-201ENST00000567275 UNC93B1Q9H1C4 597 aa17.58■□□□□ 0.4
NIFKP4-201ENST00000567275 ZNF697Q5TEC3 545 aa17.56■□□□□ 0.4
NIFKP4-201ENST00000567275 ZNF598Q86UK7 904 aaKnown RBP17.56■□□□□ 0.4
NIFKP4-201ENST00000567275 BANK1Q8NDB2 785 aa17.51■□□□□ 0.39
NIFKP4-201ENST00000567275 NR6A1Q15406 480 aa17.48■□□□□ 0.39
NIFKP4-201ENST00000567275 LINC01559Q495D7 138 aa17.48■□□□□ 0.39
NIFKP4-201ENST00000567275 ARMC2Q8NEN0 867 aa17.48■□□□□ 0.39
NIFKP4-201ENST00000567275 BAP1Q92560 729 aa17.48■□□□□ 0.39
NIFKP4-201ENST00000567275 HMX1Q9NP08 348 aaPredicted RBP17.47■□□□□ 0.39
NIFKP4-201ENST00000567275 WNT7BP56706 349 aa17.45■□□□□ 0.38
NIFKP4-201ENST00000567275 FOXC1Q12948 553 aa17.44■□□□□ 0.38
NIFKP4-201ENST00000567275 SKOR1P84550 965 aa17.42■□□□□ 0.38
NIFKP4-201ENST00000567275 ZNF511Q8NB15 262 aa17.42■□□□□ 0.38
NIFKP4-201ENST00000567275 PNMA1Q8ND90 353 aa17.42■□□□□ 0.38
NIFKP4-201ENST00000567275 SH3BP2P78314 561 aa17.41■□□□□ 0.38
NIFKP4-201ENST00000567275 NBPF14Q5TI25 921 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms