RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 DMRT2Q9Y5R5 561 aa8.56□□□□□ -1.04
GINS3-206ENST00000567143 STAC3Q96MF2 364 aa8.56□□□□□ -1.04
GINS3-206ENST00000567143 MYT1LQ9UL68 1186 aa8.56□□□□□ -1.04
GINS3-206ENST00000567143 MYBBP1AQ9BQG0 1328 aaKnown RBP8.56□□□□□ -1.04
GINS3-206ENST00000567143 CCDC146Q8IYE0 955 aa8.56□□□□□ -1.04
GINS3-206ENST00000567143 CHD2O14647 1828 aaKnown RBP8.55□□□□□ -1.04
GINS3-206ENST00000567143 ESF1Q9H501 851 aaKnown RBP8.55□□□□□ -1.04
GINS3-206ENST00000567143 NKTRP30414 1462 aaKnown RBP8.54□□□□□ -1.04
GINS3-206ENST00000567143 AEBP2Q6ZN18 517 aaPredicted RBP8.54□□□□□ -1.04
GINS3-206ENST00000567143 THEMISQ8N1K5 641 aaPredicted RBP8.54□□□□□ -1.04
GINS3-206ENST00000567143 NPHP4O75161 1426 aaPredicted RBP8.54□□□□□ -1.04
GINS3-206ENST00000567143 NLRP13Q86W25 1043 aa8.54□□□□□ -1.04
GINS3-206ENST00000567143 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.54□□□□□ -1.04
GINS3-206ENST00000567143 STRCP1A6NGW2 1772 aa8.53□□□□□ -1.04
GINS3-206ENST00000567143 ARXQ96QS3 562 aa8.53□□□□□ -1.04
GINS3-206ENST00000567143 TNNT2P45379 298 aaPredicted RBP8.53□□□□□ -1.04
GINS3-206ENST00000567143 CEBPAP49715 358 aaPredicted RBP8.53□□□□□ -1.04
GINS3-206ENST00000567143 FBXO31Q5XUX0 539 aaPredicted RBP8.53□□□□□ -1.04
GINS3-206ENST00000567143 ANO8Q9HCE9 1232 aaPredicted RBP8.53□□□□□ -1.04
GINS3-206ENST00000567143 DAXXQ9UER7 740 aaPredicted RBP8.53□□□□□ -1.04
GINS3-206ENST00000567143 NEUROD2Q15784 382 aa8.52□□□□□ -1.04
GINS3-206ENST00000567143 ADAMTS8Q9UP79 889 aa8.52□□□□□ -1.04
GINS3-206ENST00000567143 KTN1Q86UP2 1357 aaKnown RBP8.52□□□□□ -1.04
GINS3-206ENST00000567143 XIRP1Q702N8 1843 aaKnown RBP8.52□□□□□ -1.05
GINS3-206ENST00000567143 MLECQ14165 292 aa8.52□□□□□ -1.05
GINS3-206ENST00000567143 RALBP1Q15311 655 aa8.52□□□□□ -1.05
GINS3-206ENST00000567143 ADAMTS13Q76LX8 1427 aa8.51□□□□□ -1.05
GINS3-206ENST00000567143 IDI1Q13907 227 aa8.51□□□□□ -1.05
GINS3-206ENST00000567143 ALKQ9UM73 1620 aa8.51□□□□□ -1.05
GINS3-206ENST00000567143 TECPR2O15040 1411 aa8.51□□□□□ -1.05
GINS3-206ENST00000567143 RIMS2Q9UQ26 1411 aa8.51□□□□□ -1.05
GINS3-206ENST00000567143 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.5□□□□□ -1.05
GINS3-206ENST00000567143 DLC1Q96QB1 1528 aa8.5□□□□□ -1.05
GINS3-206ENST00000567143 WDR43Q15061 677 aaKnown RBP eCLIP8.5□□□□□ -1.05
GINS3-206ENST00000567143 BACH2Q9BYV9 841 aa8.5□□□□□ -1.05
GINS3-206ENST00000567143 RNF123Q5XPI4 1314 aa8.5□□□□□ -1.05
GINS3-206ENST00000567143 PIK3C2GO75747 1445 aa8.49□□□□□ -1.05
GINS3-206ENST00000567143 TCERG1O14776 1098 aaKnown RBP8.49□□□□□ -1.05
GINS3-206ENST00000567143 DISP3Q9P2K9 1392 aa8.49□□□□□ -1.05
GINS3-206ENST00000567143 PTCH1Q13635 1447 aa8.48□□□□□ -1.05
GINS3-206ENST00000567143 KNSTRNQ9Y448 316 aa8.48□□□□□ -1.05
GINS3-206ENST00000567143 HDGFP51858 240 aaKnown RBP8.48□□□□□ -1.05
GINS3-206ENST00000567143 ANKLE2Q86XL3 938 aa8.48□□□□□ -1.05
GINS3-206ENST00000567143 BRPF3Q9ULD4 1205 aa8.48□□□□□ -1.05
GINS3-206ENST00000567143 BRD4O60885 1362 aaPredicted RBP8.48□□□□□ -1.05
GINS3-206ENST00000567143 SIRT1Q96EB6 747 aa8.47□□□□□ -1.05
GINS3-206ENST00000567143 TBX22Q9Y458 520 aa8.47□□□□□ -1.05
GINS3-206ENST00000567143 ADGRB1O14514 1584 aa8.47□□□□□ -1.05
GINS3-206ENST00000567143 ADGRB2O60241 1585 aa8.47□□□□□ -1.05
GINS3-206ENST00000567143 CCDC144AA2RUR9 1427 aa8.47□□□□□ -1.05
GINS3-206ENST00000567143 DCCP43146 1447 aa8.46□□□□□ -1.05
GINS3-206ENST00000567143 PER1O15534 1290 aaPredicted RBP8.46□□□□□ -1.05
GINS3-206ENST00000567143 CHGAP10645 457 aaKnown RBP8.46□□□□□ -1.06
GINS3-206ENST00000567143 TMF1P82094 1093 aa8.46□□□□□ -1.06
GINS3-206ENST00000567143 RRP7AQ9Y3A4 280 aaKnown RBP8.46□□□□□ -1.06
GINS3-206ENST00000567143 ASXL1Q8IXJ9 1541 aa8.46□□□□□ -1.06
GINS3-206ENST00000567143 LRRC7Q96NW7 1537 aa8.46□□□□□ -1.06
GINS3-206ENST00000567143 BCAR3O75815 825 aa8.46□□□□□ -1.06
GINS3-206ENST00000567143 CANXP27824 592 aaKnown RBP8.46□□□□□ -1.06
GINS3-206ENST00000567143 FRAT1Q92837 279 aaPredicted RBP8.46□□□□□ -1.06
GINS3-206ENST00000567143 BCL2L13Q9BXK5 485 aa8.46□□□□□ -1.06
GINS3-206ENST00000567143 APAF1O14727 1248 aa8.45□□□□□ -1.06
GINS3-206ENST00000567143 LRPPRCP42704 1394 aaKnown RBP8.45□□□□□ -1.06
GINS3-206ENST00000567143 LTKP29376 864 aa8.44□□□□□ -1.06
GINS3-206ENST00000567143 SPRYD3Q8NCJ5 442 aa8.44□□□□□ -1.06
GINS3-206ENST00000567143 SPINK5Q9NQ38 1064 aaPredicted RBP8.44□□□□□ -1.06
GINS3-206ENST00000567143 TESK2Q96S53 571 aa8.44□□□□□ -1.06
GINS3-206ENST00000567143 FAM135BQ49AJ0 1406 aa8.43□□□□□ -1.06
GINS3-206ENST00000567143 EIF5BO60841 1220 aaKnown RBP8.43□□□□□ -1.06
GINS3-206ENST00000567143 CFAP65Q6ZU64 1925 aaKnown RBP8.43□□□□□ -1.06
GINS3-206ENST00000567143 CLUAP1Q96AJ1 413 aa8.43□□□□□ -1.06
GINS3-206ENST00000567143 SLKQ9H2G2 1235 aaPredicted RBP8.43□□□□□ -1.06
GINS3-206ENST00000567143 NFKBIBQ15653 356 aa8.42□□□□□ -1.06
GINS3-206ENST00000567143 TRPM1Q7Z4N2 1603 aa8.42□□□□□ -1.06
GINS3-206ENST00000567143 PPP2R1AP30153 589 aa8.42□□□□□ -1.06
GINS3-206ENST00000567143 NUTM2DQ5VT03 806 aaPredicted RBP8.42□□□□□ -1.06
GINS3-206ENST00000567143 CDC42BPGQ6DT37 1551 aa8.42□□□□□ -1.06
GINS3-206ENST00000567143 RALGAPBQ86X10 1494 aa8.42□□□□□ -1.06
GINS3-206ENST00000567143 PLEKHH1Q9ULM0 1364 aa8.42□□□□□ -1.06
GINS3-206ENST00000567143 FRAT2O75474 233 aaPredicted RBP8.42□□□□□ -1.06
GINS3-206ENST00000567143 GOLGA2Q08379 1002 aa8.42□□□□□ -1.06
GINS3-206ENST00000567143 KCNA6P17658 529 aa8.41□□□□□ -1.06
GINS3-206ENST00000567143 PDE3BQ13370 1112 aa8.41□□□□□ -1.06
GINS3-206ENST00000567143 PANK1Q8TE04 598 aa8.41□□□□□ -1.06
GINS3-206ENST00000567143 COG6Q9Y2V7 657 aa8.41□□□□□ -1.06
GINS3-206ENST00000567143 EID1Q9Y6B2 187 aa8.41□□□□□ -1.06
GINS3-206ENST00000567143 PTPRUQ92729 1446 aa8.41□□□□□ -1.06
GINS3-206ENST00000567143 NCKAP5LQ9HCH0 1330 aa8.41□□□□□ -1.06
GINS3-206ENST00000567143 PARD3Q8TEW0 1356 aa8.41□□□□□ -1.06
GINS3-206ENST00000567143 GPRASP1Q5JY77 1395 aa8.41□□□□□ -1.06
GINS3-206ENST00000567143 ABCC11Q96J66 1382 aa8.4□□□□□ -1.06
GINS3-206ENST00000567143 SAFB2Q14151 953 aaKnown RBP eCLIP8.4□□□□□ -1.06
GINS3-206ENST00000567143 DUSP27Q5VZP5 1158 aa8.4□□□□□ -1.06
GINS3-206ENST00000567143 VGFO15240 615 aaPredicted RBP8.4□□□□□ -1.07
GINS3-206ENST00000567143 PPM1GO15355 546 aaPredicted RBP8.39□□□□□ -1.07
GINS3-206ENST00000567143 HSPA2P54652 639 aa8.39□□□□□ -1.07
GINS3-206ENST00000567143 TNNQ9UQP3 1299 aa8.39□□□□□ -1.07
GINS3-206ENST00000567143 NALCNQ8IZF0 1738 aa8.39□□□□□ -1.07
GINS3-206ENST00000567143 ARHGEF28Q8N1W1 1705 aaKnown RBP8.39□□□□□ -1.07
GINS3-206ENST00000567143 TXNDC2Q86VQ3 553 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms