RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 EXOC6Q8TAG9 804 aa5.34□□□□□ -1.55
LPCAT2-208ENST00000566915 TSPOAP1O95153 1857 aa5.34□□□□□ -1.55
LPCAT2-208ENST00000566915 CAMSAP2Q08AD1 1489 aa5.34□□□□□ -1.55
LPCAT2-208ENST00000566915 TRAPPC8Q9Y2L5 1435 aa5.34□□□□□ -1.56
LPCAT2-208ENST00000566915 TNNT3P45378 269 aaPredicted RBP5.34□□□□□ -1.56
LPCAT2-208ENST00000566915 PIP4K2BP78356 416 aa5.34□□□□□ -1.56
LPCAT2-208ENST00000566915 SPRYD3Q8NCJ5 442 aa5.33□□□□□ -1.56
LPCAT2-208ENST00000566915 CRBNQ96SW2 442 aa5.33□□□□□ -1.56
LPCAT2-208ENST00000566915 NAP1L2Q9ULW6 460 aaPredicted RBP5.33□□□□□ -1.56
LPCAT2-208ENST00000566915 LRPPRCP42704 1394 aaKnown RBP5.33□□□□□ -1.56
LPCAT2-208ENST00000566915 MSH6P52701 1360 aa5.33□□□□□ -1.56
LPCAT2-208ENST00000566915 ADCY10Q96PN6 1610 aa5.33□□□□□ -1.56
LPCAT2-208ENST00000566915 ZBTB7CA1YPR0 619 aa5.33□□□□□ -1.56
LPCAT2-208ENST00000566915 MCM2P49736 904 aa5.33□□□□□ -1.56
LPCAT2-208ENST00000566915 PDE3AQ14432 1141 aa5.33□□□□□ -1.56
LPCAT2-208ENST00000566915 LMTK3Q96Q04 1460 aa5.33□□□□□ -1.56
LPCAT2-208ENST00000566915 TIAM1Q13009 1591 aa5.33□□□□□ -1.56
LPCAT2-208ENST00000566915 LETM1O95202 739 aaPredicted RBP5.33□□□□□ -1.56
LPCAT2-208ENST00000566915 RUNDC1Q96C34 613 aa5.33□□□□□ -1.56
LPCAT2-208ENST00000566915 KIF7Q2M1P5 1343 aa5.33□□□□□ -1.56
LPCAT2-208ENST00000566915 DIP2BQ9P265 1576 aa5.33□□□□□ -1.56
LPCAT2-208ENST00000566915 TPM2P07951 284 aa5.33□□□□□ -1.56
LPCAT2-208ENST00000566915 PDIA4P13667 645 aaKnown RBP5.33□□□□□ -1.56
LPCAT2-208ENST00000566915 WWC1Q8IX03 1113 aa5.33□□□□□ -1.56
LPCAT2-208ENST00000566915 DZIP1LQ8IYY4 767 aaKnown RBP5.33□□□□□ -1.56
LPCAT2-208ENST00000566915 DUOX2Q9NRD8 1548 aa5.33□□□□□ -1.56
LPCAT2-208ENST00000566915 SMG6Q86US8 1419 aaKnown RBP5.33□□□□□ -1.56
LPCAT2-208ENST00000566915 ERBINQ96RT1 1412 aa5.33□□□□□ -1.56
LPCAT2-208ENST00000566915 HSP90AB4PQ58FF6 505 aa5.32□□□□□ -1.56
LPCAT2-208ENST00000566915 SENP3-EIF4A1A0A087X0R7 540 aa5.32□□□□□ -1.56
LPCAT2-208ENST00000566915 ERCC6L2Q5T890 1561 aa5.32□□□□□ -1.56
LPCAT2-208ENST00000566915 TRIM6-TRIM34B2RNG4 842 aa5.32□□□□□ -1.56
LPCAT2-208ENST00000566915 GOLGA6L19H0YKK7 550 aa5.32□□□□□ -1.56
LPCAT2-208ENST00000566915 MBD3O95983 291 aa5.32□□□□□ -1.56
LPCAT2-208ENST00000566915 INTS3Q68E01 1043 aaKnown RBP5.32□□□□□ -1.56
LPCAT2-208ENST00000566915 IL27Q8NEV9 243 aa5.32□□□□□ -1.56
LPCAT2-208ENST00000566915 FAM43AQ8N2R8 423 aa5.32□□□□□ -1.56
LPCAT2-208ENST00000566915 CLUAP1Q96AJ1 413 aa5.32□□□□□ -1.56
LPCAT2-208ENST00000566915 DIAPH3Q9NSV4 1193 aa5.32□□□□□ -1.56
LPCAT2-208ENST00000566915 MYO5CQ9NQX4 1742 aa5.32□□□□□ -1.56
LPCAT2-208ENST00000566915 ZMYM3Q14202 1370 aa5.32□□□□□ -1.56
LPCAT2-208ENST00000566915 CADPS2Q86UW7 1296 aa5.32□□□□□ -1.56
LPCAT2-208ENST00000566915 NGDNQ8NEJ9 315 aaKnown RBP5.32□□□□□ -1.56
LPCAT2-208ENST00000566915 GPATCH8Q9UKJ3 1502 aaKnown RBP5.31□□□□□ -1.56
LPCAT2-208ENST00000566915 MLH3Q9UHC1 1453 aa5.31□□□□□ -1.56
LPCAT2-208ENST00000566915 TPM1P09493 284 aa5.31□□□□□ -1.56
LPCAT2-208ENST00000566915 ZKSCAN1P17029 563 aaPredicted RBP5.31□□□□□ -1.56
LPCAT2-208ENST00000566915 HMGN5P82970 282 aaKnown RBP5.31□□□□□ -1.56
LPCAT2-208ENST00000566915 CPLX2Q6PUV4 134 aaKnown RBP5.31□□□□□ -1.56
LPCAT2-208ENST00000566915 GPRASP1Q5JY77 1395 aa5.31□□□□□ -1.56
LPCAT2-208ENST00000566915 GNAI1P63096 354 aa5.31□□□□□ -1.56
LPCAT2-208ENST00000566915 RNF20Q5VTR2 975 aa5.31□□□□□ -1.56
LPCAT2-208ENST00000566915 CCDC70Q6NSX1 233 aa5.31□□□□□ -1.56
LPCAT2-208ENST00000566915 NFKBIBQ15653 356 aa5.31□□□□□ -1.56
LPCAT2-208ENST00000566915 TEX35Q5T0J7 233 aa5.31□□□□□ -1.56
LPCAT2-208ENST00000566915 ZNF428Q96B54 188 aa5.31□□□□□ -1.56
LPCAT2-208ENST00000566915 CCDC39Q9UFE4 941 aa5.31□□□□□ -1.56
LPCAT2-208ENST00000566915 CIZ1Q9ULV3 898 aaPredicted RBP5.31□□□□□ -1.56
LPCAT2-208ENST00000566915 DAPK1P53355 1430 aa5.3□□□□□ -1.56
LPCAT2-208ENST00000566915 CEBPAP49715 358 aaPredicted RBP5.3□□□□□ -1.56
LPCAT2-208ENST00000566915 ANKRD45Q5TZF3 282 aa5.3□□□□□ -1.56
LPCAT2-208ENST00000566915 HOOK1Q9UJC3 728 aaKnown RBP5.3□□□□□ -1.56
LPCAT2-208ENST00000566915 ATP7AQ04656 1500 aa5.3□□□□□ -1.56
LPCAT2-208ENST00000566915 BECN2A8MW95 431 aa5.3□□□□□ -1.56
LPCAT2-208ENST00000566915 SETQ01105 290 aaPredicted RBP5.3□□□□□ -1.56
LPCAT2-208ENST00000566915 C22orf23Q9BZE7 217 aa5.3□□□□□ -1.56
LPCAT2-208ENST00000566915 SF3A1Q15459 793 aaKnown RBP5.3□□□□□ -1.56
LPCAT2-208ENST00000566915 TPRNQ4KMQ1 711 aa5.3□□□□□ -1.56
LPCAT2-208ENST00000566915 STK26Q9P289 416 aa5.3□□□□□ -1.56
LPCAT2-208ENST00000566915 ABCA9Q8IUA7 1624 aa5.3□□□□□ -1.56
LPCAT2-208ENST00000566915 HECW2Q9P2P5 1572 aa5.3□□□□□ -1.56
LPCAT2-208ENST00000566915 ZNF644Q9H582 1327 aaPredicted RBP5.3□□□□□ -1.56
LPCAT2-208ENST00000566915 CCDC146Q8IYE0 955 aa5.3□□□□□ -1.56
LPCAT2-208ENST00000566915 SYCP2Q9BX26 1530 aa5.29□□□□□ -1.56
LPCAT2-208ENST00000566915 NPATQ14207 1427 aa5.29□□□□□ -1.56
LPCAT2-208ENST00000566915 APAF1O14727 1248 aa5.29□□□□□ -1.56
LPCAT2-208ENST00000566915 DIAPH1O60610 1272 aaKnown RBP5.29□□□□□ -1.56
LPCAT2-208ENST00000566915 CSB-PGBD3P0DP91 1061 aa5.29□□□□□ -1.56
LPCAT2-208ENST00000566915 HSP90B1P14625 803 aaKnown RBP5.29□□□□□ -1.56
LPCAT2-208ENST00000566915 TSR1Q2NL82 804 aaKnown RBP5.29□□□□□ -1.56
LPCAT2-208ENST00000566915 CWC22Q9HCG8 908 aaKnown RBP5.29□□□□□ -1.56
LPCAT2-208ENST00000566915 ARGLU1Q9NWB6 273 aaPredicted RBP5.29□□□□□ -1.56
LPCAT2-208ENST00000566915 CDC45O75419 566 aa5.29□□□□□ -1.56
LPCAT2-208ENST00000566915 ACBD3Q9H3P7 528 aa5.29□□□□□ -1.56
LPCAT2-208ENST00000566915 COG6Q9Y2V7 657 aa5.29□□□□□ -1.56
LPCAT2-208ENST00000566915 SHANK2Q9UPX8 1470 aa5.29□□□□□ -1.56
LPCAT2-208ENST00000566915 PAK3O75914 559 aaPredicted RBP5.29□□□□□ -1.56
LPCAT2-208ENST00000566915 EVA1CP58658 441 aa5.29□□□□□ -1.56
LPCAT2-208ENST00000566915 CCDC173Q0VFZ6 552 aa5.29□□□□□ -1.56
LPCAT2-208ENST00000566915 FAM184AQ8NB25 1140 aa5.29□□□□□ -1.56
LPCAT2-208ENST00000566915 GCC1Q96CN9 775 aa5.29□□□□□ -1.56
LPCAT2-208ENST00000566915 COG3Q96JB2 828 aa5.29□□□□□ -1.56
LPCAT2-208ENST00000566915 ANKRD30BQ9BXX2 1392 aa5.29□□□□□ -1.56
LPCAT2-208ENST00000566915 H3BQV1 296 aa5.29□□□□□ -1.56
LPCAT2-208ENST00000566915 HSPA2P54652 639 aa5.29□□□□□ -1.56
LPCAT2-208ENST00000566915 GORABQ5T7V8 394 aa5.29□□□□□ -1.56
LPCAT2-208ENST00000566915 IFFO2Q5TF58 517 aa5.29□□□□□ -1.56
LPCAT2-208ENST00000566915 NLRP1Q9C000 1473 aa5.29□□□□□ -1.56
LPCAT2-208ENST00000566915 PTPRKQ15262 1439 aa5.29□□□□□ -1.56
LPCAT2-208ENST00000566915 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms