RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 CRBNQ96SW2 442 aa24.63■■□□□ 1.53
MSLN-207ENST00000566549 FANCIQ9NVI1 1328 aa24.63■■□□□ 1.53
MSLN-207ENST00000566549 SPINK5Q9NQ38 1064 aaPredicted RBP24.63■■□□□ 1.53
MSLN-207ENST00000566549 ARHGEF28Q8N1W1 1705 aaKnown RBP24.62■■□□□ 1.53
MSLN-207ENST00000566549 SRPK2P78362 688 aaKnown RBP24.62■■□□□ 1.53
MSLN-207ENST00000566549 ANP32EQ9BTT0 268 aa24.62■■□□□ 1.53
MSLN-207ENST00000566549 MYO5BQ9ULV0 1848 aa24.61■■□□□ 1.53
MSLN-207ENST00000566549 CGNL1Q0VF96 1302 aa24.61■■□□□ 1.53
MSLN-207ENST00000566549 MINK1Q8N4C8 1332 aaPredicted RBP24.61■■□□□ 1.53
MSLN-207ENST00000566549 TMEM131LA2VDJ0 1609 aa24.61■■□□□ 1.53
MSLN-207ENST00000566549 SLFN5Q08AF3 891 aa24.6■■□□□ 1.53
MSLN-207ENST00000566549 ZFYVE9O95405 1425 aa24.6■■□□□ 1.53
MSLN-207ENST00000566549 POLR3AO14802 1390 aaPredicted RBP24.6■■□□□ 1.53
MSLN-207ENST00000566549 PRAM1Q96QH2 718 aa24.6■■□□□ 1.53
MSLN-207ENST00000566549 DMRT2Q9Y5R5 561 aa24.59■■□□□ 1.53
MSLN-207ENST00000566549 POGKQ9P215 609 aa24.58■■□□□ 1.53
MSLN-207ENST00000566549 ANKRD36BQ8N2N9 1353 aa24.57■■□□□ 1.52
MSLN-207ENST00000566549 MTHFSP49914 203 aa24.57■■□□□ 1.52
MSLN-207ENST00000566549 NEUROD2Q15784 382 aa24.56■■□□□ 1.52
MSLN-207ENST00000566549 RRP7AQ9Y3A4 280 aaKnown RBP24.54■■□□□ 1.52
MSLN-207ENST00000566549 YTHDC2Q9H6S0 1430 aaKnown RBP24.53■■□□□ 1.52
MSLN-207ENST00000566549 PUS7Q96PZ0 661 aaKnown RBP24.53■■□□□ 1.52
MSLN-207ENST00000566549 PTPRMP28827 1452 aa24.52■■□□□ 1.52
MSLN-207ENST00000566549 A0A1W2PP64 1363 aa24.52■■□□□ 1.52
MSLN-207ENST00000566549 TRMT2AQ8IZ69 625 aaKnown RBP24.51■■□□□ 1.51
MSLN-207ENST00000566549 E9PSI1 815 aa24.5■■□□□ 1.51
MSLN-207ENST00000566549 GGNBP2Q9H3C7 697 aa24.5■■□□□ 1.51
MSLN-207ENST00000566549 CLTCQ00610 1675 aaKnown RBP24.49■■□□□ 1.51
MSLN-207ENST00000566549 WWC1Q8IX03 1113 aa24.49■■□□□ 1.51
MSLN-207ENST00000566549 CFAP53Q96M91 514 aa24.49■■□□□ 1.51
MSLN-207ENST00000566549 SKAP1Q86WV1 359 aa24.48■■□□□ 1.51
MSLN-207ENST00000566549 BCAR3O75815 825 aa24.47■■□□□ 1.51
MSLN-207ENST00000566549 NKTRP30414 1462 aaKnown RBP24.47■■□□□ 1.51
MSLN-207ENST00000566549 ALKQ9UM73 1620 aa24.47■■□□□ 1.51
MSLN-207ENST00000566549 AGLP35573 1532 aa24.46■■□□□ 1.51
MSLN-207ENST00000566549 SHPRHQ149N8 1683 aa24.46■■□□□ 1.51
MSLN-207ENST00000566549 TCP11L2Q8N4U5 519 aa24.46■■□□□ 1.51
MSLN-207ENST00000566549 RUNDC1Q96C34 613 aa24.46■■□□□ 1.51
MSLN-207ENST00000566549 USP32Q8NFA0 1604 aa24.46■■□□□ 1.51
MSLN-207ENST00000566549 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.45■■□□□ 1.5
MSLN-207ENST00000566549 PPP6R1Q9UPN7 881 aa24.45■■□□□ 1.5
MSLN-207ENST00000566549 WAPLQ7Z5K2 1190 aa24.44■■□□□ 1.5
MSLN-207ENST00000566549 CDK19Q9BWU1 502 aa24.44■■□□□ 1.5
MSLN-207ENST00000566549 REREQ9P2R6 1566 aa24.44■■□□□ 1.5
MSLN-207ENST00000566549 A2ML1A8K2U0 1454 aa24.44■■□□□ 1.5
MSLN-207ENST00000566549 NSD2O96028 1365 aa24.44■■□□□ 1.5
MSLN-207ENST00000566549 U2AF1L5P0DN76 240 aaPredicted RBP24.43■■□□□ 1.5
MSLN-207ENST00000566549 U2AF1Q01081 240 aaKnown RBP eCLIP24.43■■□□□ 1.5
MSLN-207ENST00000566549 ESF1Q9H501 851 aaKnown RBP24.43■■□□□ 1.5
MSLN-207ENST00000566549 ATAD2Q6PL18 1390 aa24.43■■□□□ 1.5
MSLN-207ENST00000566549 ERICH6Q7L0X2 663 aa24.43■■□□□ 1.5
MSLN-207ENST00000566549 ABCC11Q96J66 1382 aa24.43■■□□□ 1.5
MSLN-207ENST00000566549 TERF2IPQ9NYB0 399 aa24.42■■□□□ 1.5
MSLN-207ENST00000566549 RIMS2Q9UQ26 1411 aa24.42■■□□□ 1.5
MSLN-207ENST00000566549 CABP1Q9NZU7 370 aa24.41■■□□□ 1.5
MSLN-207ENST00000566549 NGEFQ8N5V2 710 aa24.41■■□□□ 1.5
MSLN-207ENST00000566549 NINLQ9Y2I6 1382 aa24.4■■□□□ 1.5
MSLN-207ENST00000566549 FYB1O15117 783 aa24.39■■□□□ 1.5
MSLN-207ENST00000566549 SPATA31D1Q6ZQQ2 1576 aa24.39■■□□□ 1.49
MSLN-207ENST00000566549 TCERG1O14776 1098 aaKnown RBP24.39■■□□□ 1.49
MSLN-207ENST00000566549 U2SURPO15042 1029 aaKnown RBP24.37■■□□□ 1.49
MSLN-207ENST00000566549 CD163L1Q9NR16 1453 aa24.37■■□□□ 1.49
MSLN-207ENST00000566549 HDGFL2Q7Z4V5 671 aaPredicted RBP24.37■■□□□ 1.49
MSLN-207ENST00000566549 IQSEC2Q5JU85 1478 aa24.36■■□□□ 1.49
MSLN-207ENST00000566549 ARHGEF40Q8TER5 1519 aa24.35■■□□□ 1.49
MSLN-207ENST00000566549 ZMYM3Q14202 1370 aa24.35■■□□□ 1.49
MSLN-207ENST00000566549 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.34■■□□□ 1.49
MSLN-207ENST00000566549 CANXP27824 592 aaKnown RBP24.33■■□□□ 1.48
MSLN-207ENST00000566549 PDE4AP27815 886 aa24.32■■□□□ 1.48
MSLN-207ENST00000566549 ANP32AP39687 249 aaKnown RBP24.32■■□□□ 1.48
MSLN-207ENST00000566549 NPM2Q86SE8 214 aaKnown RBP24.32■■□□□ 1.48
MSLN-207ENST00000566549 KDM2BQ8NHM5 1336 aa24.32■■□□□ 1.48
MSLN-207ENST00000566549 FRAT1Q92837 279 aaPredicted RBP24.31■■□□□ 1.48
MSLN-207ENST00000566549 PHF23Q9BUL5 403 aaPredicted RBP24.31■■□□□ 1.48
MSLN-207ENST00000566549 FBLN1P23142 703 aa24.3■■□□□ 1.48
MSLN-207ENST00000566549 TXNDC2Q86VQ3 553 aa24.3■■□□□ 1.48
MSLN-207ENST00000566549 METP08581 1390 aa24.3■■□□□ 1.48
MSLN-207ENST00000566549 KIF13AQ9H1H9 1805 aa24.3■■□□□ 1.48
MSLN-207ENST00000566549 NLRP1Q9C000 1473 aa24.29■■□□□ 1.48
MSLN-207ENST00000566549 BCL2L13Q9BXK5 485 aa24.29■■□□□ 1.48
MSLN-207ENST00000566549 CENPQQ7L2Z9 268 aaPredicted RBP24.28■■□□□ 1.48
MSLN-207ENST00000566549 WDR63Q8IWG1 891 aa24.28■■□□□ 1.48
MSLN-207ENST00000566549 PANK1Q8TE04 598 aa24.27■■□□□ 1.48
MSLN-207ENST00000566549 PPM1GO15355 546 aaPredicted RBP24.27■■□□□ 1.48
MSLN-207ENST00000566549 MS4A1P11836 297 aa24.26■■□□□ 1.47
MSLN-207ENST00000566549 BACH2Q9BYV9 841 aa24.26■■□□□ 1.47
MSLN-207ENST00000566549 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.25■■□□□ 1.47
MSLN-207ENST00000566549 PAK3O75914 559 aaPredicted RBP24.25■■□□□ 1.47
MSLN-207ENST00000566549 CCDC27Q2M243 656 aa24.25■■□□□ 1.47
MSLN-207ENST00000566549 COG6Q9Y2V7 657 aa24.25■■□□□ 1.47
MSLN-207ENST00000566549 NOP58Q9Y2X3 529 aaKnown RBP24.25■■□□□ 1.47
MSLN-207ENST00000566549 RARSP54136 660 aaKnown RBP24.24■■□□□ 1.47
MSLN-207ENST00000566549 NCKAP5LQ9HCH0 1330 aa24.24■■□□□ 1.47
MSLN-207ENST00000566549 DLC1Q96QB1 1528 aa24.23■■□□□ 1.47
MSLN-207ENST00000566549 PLEKHF1Q96S99 279 aa24.23■■□□□ 1.47
MSLN-207ENST00000566549 TNRQ92752 1358 aa24.23■■□□□ 1.47
MSLN-207ENST00000566549 COL3A1P02461 1466 aaPredicted RBP24.23■■□□□ 1.47
MSLN-207ENST00000566549 MAPK8IP3Q9UPT6 1336 aa24.22■■□□□ 1.47
MSLN-207ENST00000566549 DIAPH1O60610 1272 aaKnown RBP24.22■■□□□ 1.47
MSLN-207ENST00000566549 PLPPR3Q6T4P5 718 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms