RNA–Protein interactions for RNA: ENST00000566401.1

YPEL3-208, Transcript of yippee like 3, humanhuman

TSL 3

Gene YPEL3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YPEL3-208ENST00000566401 UPF1Q92900 1129 aaKnown RBP eCLIP28.59■■■□□ 2.17
YPEL3-208ENST00000566401 QTRT2Q9H974 415 aaKnown RBP28.58■■■□□ 2.17
YPEL3-208ENST00000566401 ANKRD30BQ9BXX2 1392 aa28.58■■■□□ 2.17
YPEL3-208ENST00000566401 ESCO1Q5FWF5 840 aa28.57■■■□□ 2.16
YPEL3-208ENST00000566401 NGLY1Q96IV0 654 aa28.55■■■□□ 2.16
YPEL3-208ENST00000566401 IFT172Q9UG01 1749 aa28.55■■■□□ 2.16
YPEL3-208ENST00000566401 LRPPRCP42704 1394 aaKnown RBP28.54■■■□□ 2.16
YPEL3-208ENST00000566401 NUTM2FA1L443 756 aa28.53■■■□□ 2.16
YPEL3-208ENST00000566401 ABCC11Q96J66 1382 aa28.52■■■□□ 2.16
YPEL3-208ENST00000566401 PLEKHH1Q9ULM0 1364 aa28.52■■■□□ 2.16
YPEL3-208ENST00000566401 FOXO3O43524 673 aa28.51■■■□□ 2.15
YPEL3-208ENST00000566401 RBM6P78332 1123 aaKnown RBP28.51■■■□□ 2.15
YPEL3-208ENST00000566401 CDK12Q9NYV4 1490 aaPredicted RBP28.51■■■□□ 2.15
YPEL3-208ENST00000566401 TECPR2O15040 1411 aa28.51■■■□□ 2.15
YPEL3-208ENST00000566401 XPCQ01831 940 aaPredicted RBP28.5■■■□□ 2.15
YPEL3-208ENST00000566401 PIK3C2GO75747 1445 aa28.5■■■□□ 2.15
YPEL3-208ENST00000566401 CDC42BPGQ6DT37 1551 aa28.5■■■□□ 2.15
YPEL3-208ENST00000566401 NPHP3Q7Z494 1330 aa28.47■■■□□ 2.15
YPEL3-208ENST00000566401 C14orf93Q9H972 538 aaKnown RBP28.46■■■□□ 2.15
YPEL3-208ENST00000566401 YTHDC2Q9H6S0 1430 aaKnown RBP28.45■■■□□ 2.15
YPEL3-208ENST00000566401 RGS12O14924 1447 aa28.44■■■□□ 2.14
YPEL3-208ENST00000566401 CFAP70Q5T0N1 1121 aa28.44■■■□□ 2.14
YPEL3-208ENST00000566401 USP21Q9UK80 565 aa28.44■■■□□ 2.14
YPEL3-208ENST00000566401 PXDNQ92626 1479 aa28.44■■■□□ 2.14
YPEL3-208ENST00000566401 ACIN1Q9UKV3 1341 aaKnown RBP28.43■■■□□ 2.14
YPEL3-208ENST00000566401 FNBP4Q8N3X1 1017 aaPredicted RBP28.42■■■□□ 2.14
YPEL3-208ENST00000566401 KNDC1Q76NI1 1749 aa28.41■■■□□ 2.14
YPEL3-208ENST00000566401 COL22A1Q8NFW1 1626 aaPredicted RBP28.4■■■□□ 2.14
YPEL3-208ENST00000566401 SIRT1Q96EB6 747 aa28.4■■■□□ 2.14
YPEL3-208ENST00000566401 RAB3GAP2Q9H2M9 1393 aa28.39■■■□□ 2.14
YPEL3-208ENST00000566401 MYOM2P54296 1465 aa28.39■■■□□ 2.13
YPEL3-208ENST00000566401 TRPC5Q9UL62 973 aaPredicted RBP28.38■■■□□ 2.13
YPEL3-208ENST00000566401 NRXN1Q9ULB1 1477 aa28.37■■■□□ 2.13
YPEL3-208ENST00000566401 DHX57Q6P158 1386 aaKnown RBP28.36■■■□□ 2.13
YPEL3-208ENST00000566401 FMN2Q9NZ56 1722 aa28.35■■■□□ 2.13
YPEL3-208ENST00000566401 SAFB2Q14151 953 aaKnown RBP eCLIP28.34■■■□□ 2.13
YPEL3-208ENST00000566401 RGPD8O14715 1765 aaPredicted RBP28.33■■■□□ 2.13
YPEL3-208ENST00000566401 KRT28Q7Z3Y7 464 aa28.32■■■□□ 2.12
YPEL3-208ENST00000566401 PRAM1Q96QH2 718 aa28.32■■■□□ 2.12
YPEL3-208ENST00000566401 SPATA31A3Q5VYP0 1347 aa28.32■■■□□ 2.12
YPEL3-208ENST00000566401 ATRNO75882 1429 aa28.31■■■□□ 2.12
YPEL3-208ENST00000566401 BCL9LQ86UU0 1499 aa28.3■■■□□ 2.12
YPEL3-208ENST00000566401 PHF8Q9UPP1 1060 aa28.29■■■□□ 2.12
YPEL3-208ENST00000566401 MARF1Q9Y4F3 1742 aaKnown RBP28.28■■■□□ 2.12
YPEL3-208ENST00000566401 KDM2AQ9Y2K7 1162 aa28.26■■■□□ 2.11
YPEL3-208ENST00000566401 POGKQ9P215 609 aa28.25■■■□□ 2.11
YPEL3-208ENST00000566401 KIF1AQ12756 1690 aa28.25■■■□□ 2.11
YPEL3-208ENST00000566401 GJD4Q96KN9 370 aaPredicted RBP28.23■■■□□ 2.11
YPEL3-208ENST00000566401 CABLES1Q8TDN4 633 aa28.22■■■□□ 2.11
YPEL3-208ENST00000566401 DCAF11Q8TEB1 546 aa28.22■■■□□ 2.11
YPEL3-208ENST00000566401 TRAK1Q9UPV9 953 aa28.22■■■□□ 2.11
YPEL3-208ENST00000566401 PLEKHG5O94827 1062 aa28.21■■■□□ 2.11
YPEL3-208ENST00000566401 PSME1Q06323 249 aa28.21■■■□□ 2.11
YPEL3-208ENST00000566401 ATAD2Q6PL18 1390 aa28.21■■■□□ 2.11
YPEL3-208ENST00000566401 PMFBP1Q8TBY8 1022 aa28.2■■■□□ 2.1
YPEL3-208ENST00000566401 ADGRB1O14514 1584 aa28.2■■■□□ 2.1
YPEL3-208ENST00000566401 DLC1Q96QB1 1528 aa28.19■■■□□ 2.1
YPEL3-208ENST00000566401 UNC5CLQ8IV45 518 aa28.19■■■□□ 2.1
YPEL3-208ENST00000566401 HIRIP3Q9BW71 556 aaPredicted RBP28.19■■■□□ 2.1
YPEL3-208ENST00000566401 LMOD2Q6P5Q4 547 aa28.17■■■□□ 2.1
YPEL3-208ENST00000566401 SLIT2O94813 1529 aa28.17■■■□□ 2.1
YPEL3-208ENST00000566401 TNS3Q68CZ2 1445 aa28.17■■■□□ 2.1
YPEL3-208ENST00000566401 MINK1Q8N4C8 1332 aaPredicted RBP28.16■■■□□ 2.1
YPEL3-208ENST00000566401 HRCP23327 699 aa28.15■■■□□ 2.1
YPEL3-208ENST00000566401 USP32Q8NFA0 1604 aa28.14■■■□□ 2.1
YPEL3-208ENST00000566401 SBNO1A3KN83 1393 aa28.14■■■□□ 2.1
YPEL3-208ENST00000566401 HAP1P54257 671 aaPredicted RBP28.14■■■□□ 2.1
YPEL3-208ENST00000566401 EP400Q96L91 3159 aa28.13■■■□□ 2.09
YPEL3-208ENST00000566401 ANKARQ7Z5J8 1434 aa28.12■■■□□ 2.09
YPEL3-208ENST00000566401 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.11■■■□□ 2.09
YPEL3-208ENST00000566401 PRR36Q9H6K5 1346 aa28.11■■■□□ 2.09
YPEL3-208ENST00000566401 RALGAPBQ86X10 1494 aa28.1■■■□□ 2.09
YPEL3-208ENST00000566401 GLI3P10071 1580 aa28.1■■■□□ 2.09
YPEL3-208ENST00000566401 ADGRB2O60241 1585 aa28.09■■■□□ 2.09
YPEL3-208ENST00000566401 STAC3Q96MF2 364 aa28.09■■■□□ 2.09
YPEL3-208ENST00000566401 WASLO00401 505 aaPredicted RBP28.08■■■□□ 2.09
YPEL3-208ENST00000566401 ARHGEF10O15013 1369 aa28.08■■■□□ 2.09
YPEL3-208ENST00000566401 FAM83GA6ND36 823 aa28.07■■■□□ 2.08
YPEL3-208ENST00000566401 VPS72Q15906 364 aa28.05■■■□□ 2.08
YPEL3-208ENST00000566401 CCDC125Q86Z20 511 aa28.03■■■□□ 2.08
YPEL3-208ENST00000566401 ABCA3Q99758 1704 aa28.02■■■□□ 2.08
YPEL3-208ENST00000566401 SEPT12Q8IYM1 358 aa28.02■■■□□ 2.08
YPEL3-208ENST00000566401 BRWD3Q6RI45 1802 aa28.02■■■□□ 2.08
YPEL3-208ENST00000566401 TRPM3Q9HCF6 1732 aaPredicted RBP28.01■■■□□ 2.07
YPEL3-208ENST00000566401 GPRASP1Q5JY77 1395 aa28.01■■■□□ 2.07
YPEL3-208ENST00000566401 SRCAPQ6ZRS2 3230 aa28.01■■■□□ 2.07
YPEL3-208ENST00000566401 CCDC9Q9Y3X0 531 aaKnown RBP28.01■■■□□ 2.07
YPEL3-208ENST00000566401 TULP4Q9NRJ4 1543 aa28■■■□□ 2.07
YPEL3-208ENST00000566401 PLCH1Q4KWH8 1693 aa28■■■□□ 2.07
YPEL3-208ENST00000566401 EIF3AQ14152 1382 aaKnown RBP27.99■■■□□ 2.07
YPEL3-208ENST00000566401 ONECUT3O60422 494 aaPredicted RBP27.99■■■□□ 2.07
YPEL3-208ENST00000566401 NGDNQ8NEJ9 315 aaKnown RBP27.99■■■□□ 2.07
YPEL3-208ENST00000566401 NWD2Q9ULI1 1742 aa27.98■■■□□ 2.07
YPEL3-208ENST00000566401 NUDT16Q96DE0 195 aaKnown RBP27.96■■■□□ 2.07
YPEL3-208ENST00000566401 ALS2Q96Q42 1657 aa27.96■■■□□ 2.07
YPEL3-208ENST00000566401 PAK3O75914 559 aaPredicted RBP27.95■■■□□ 2.06
YPEL3-208ENST00000566401 BTG4Q9NY30 223 aa27.95■■■□□ 2.06
YPEL3-208ENST00000566401 ARHGEF28Q8N1W1 1705 aaKnown RBP27.95■■■□□ 2.06
YPEL3-208ENST00000566401 ZRANB1Q9UGI0 708 aa27.94■■■□□ 2.06
YPEL3-208ENST00000566401 CDK19Q9BWU1 502 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms