RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 ZNF518AQ6AHZ1 1483 aa27.89■■■□□ 2.06
SPSB3-208ENST00000566339 UGGT1Q9NYU2 1555 aa27.89■■■□□ 2.05
SPSB3-208ENST00000566339 ARHGEF40Q8TER5 1519 aa27.88■■■□□ 2.05
SPSB3-208ENST00000566339 YEATS2Q9ULM3 1422 aa27.87■■■□□ 2.05
SPSB3-208ENST00000566339 APAF1O14727 1248 aa27.86■■■□□ 2.05
SPSB3-208ENST00000566339 USP32Q8NFA0 1604 aa27.85■■■□□ 2.05
SPSB3-208ENST00000566339 KIF3BO15066 747 aa27.84■■■□□ 2.05
SPSB3-208ENST00000566339 ZC3H13Q5T200 1668 aaKnown RBP27.83■■■□□ 2.05
SPSB3-208ENST00000566339 SKAP1Q86WV1 359 aa27.83■■■□□ 2.05
SPSB3-208ENST00000566339 PPLO60437 1756 aa27.82■■■□□ 2.04
SPSB3-208ENST00000566339 CENPJQ9HC77 1338 aaPredicted RBP27.82■■■□□ 2.04
SPSB3-208ENST00000566339 HECW2Q9P2P5 1572 aa27.8■■■□□ 2.04
SPSB3-208ENST00000566339 CLUAP1Q96AJ1 413 aa27.8■■■□□ 2.04
SPSB3-208ENST00000566339 MLH3Q9UHC1 1453 aa27.79■■■□□ 2.04
SPSB3-208ENST00000566339 PMFBP1Q8TBY8 1022 aa27.78■■■□□ 2.04
SPSB3-208ENST00000566339 CCDC146Q8IYE0 955 aa27.78■■■□□ 2.04
SPSB3-208ENST00000566339 SPINK5Q9NQ38 1064 aaPredicted RBP27.78■■■□□ 2.04
SPSB3-208ENST00000566339 IL27Q8NEV9 243 aa27.77■■■□□ 2.04
SPSB3-208ENST00000566339 PUS7Q96PZ0 661 aaKnown RBP27.77■■■□□ 2.04
SPSB3-208ENST00000566339 BECN1Q14457 450 aa27.76■■■□□ 2.03
SPSB3-208ENST00000566339 CCDC27Q2M243 656 aa27.76■■■□□ 2.03
SPSB3-208ENST00000566339 WDR63Q8IWG1 891 aa27.76■■■□□ 2.03
SPSB3-208ENST00000566339 IQSEC2Q5JU85 1478 aa27.76■■■□□ 2.03
SPSB3-208ENST00000566339 SHPRHQ149N8 1683 aa27.76■■■□□ 2.03
SPSB3-208ENST00000566339 BCAR3O75815 825 aa27.76■■■□□ 2.03
SPSB3-208ENST00000566339 RGS3P49796 1198 aa27.76■■■□□ 2.03
SPSB3-208ENST00000566339 WWC1Q8IX03 1113 aa27.76■■■□□ 2.03
SPSB3-208ENST00000566339 PHF23Q9BUL5 403 aaPredicted RBP27.76■■■□□ 2.03
SPSB3-208ENST00000566339 CARD14Q9BXL6 1004 aa27.75■■■□□ 2.03
SPSB3-208ENST00000566339 SIGLEC1Q9BZZ2 1709 aa27.75■■■□□ 2.03
SPSB3-208ENST00000566339 RUNDC1Q96C34 613 aa27.73■■■□□ 2.03
SPSB3-208ENST00000566339 ADAMTSL3P82987 1691 aa27.73■■■□□ 2.03
SPSB3-208ENST00000566339 ADGRF5Q8IZF2 1346 aa27.72■■■□□ 2.03
SPSB3-208ENST00000566339 MLECQ14165 292 aa27.71■■■□□ 2.03
SPSB3-208ENST00000566339 USP19O94966 1318 aa27.71■■■□□ 2.03
SPSB3-208ENST00000566339 IGHDP01880 384 aa27.71■■■□□ 2.03
SPSB3-208ENST00000566339 CFAP70Q5T0N1 1121 aa27.71■■■□□ 2.03
SPSB3-208ENST00000566339 FRAT1Q92837 279 aaPredicted RBP27.7■■■□□ 2.02
SPSB3-208ENST00000566339 ADGRB1O14514 1584 aa27.7■■■□□ 2.02
SPSB3-208ENST00000566339 NSD2O96028 1365 aa27.69■■■□□ 2.02
SPSB3-208ENST00000566339 NPATQ14207 1427 aa27.69■■■□□ 2.02
SPSB3-208ENST00000566339 SLC4A3P48751 1232 aa27.68■■■□□ 2.02
SPSB3-208ENST00000566339 QRICH2Q9H0J4 1663 aa27.68■■■□□ 2.02
SPSB3-208ENST00000566339 ABCC3O15438 1527 aa27.68■■■□□ 2.02
SPSB3-208ENST00000566339 PIK3C2BO00750 1634 aa27.68■■■□□ 2.02
SPSB3-208ENST00000566339 CAMSAP1Q5T5Y3 1602 aa27.67■■■□□ 2.02
SPSB3-208ENST00000566339 CT47B1P0C2W7 299 aaPredicted RBP27.67■■■□□ 2.02
SPSB3-208ENST00000566339 CANXP27824 592 aaKnown RBP27.66■■■□□ 2.02
SPSB3-208ENST00000566339 NOS1P29475 1434 aa27.66■■■□□ 2.02
SPSB3-208ENST00000566339 PTPRMP28827 1452 aa27.65■■■□□ 2.02
SPSB3-208ENST00000566339 NLRP1Q9C000 1473 aa27.65■■■□□ 2.02
SPSB3-208ENST00000566339 RPGRIP1LQ68CZ1 1315 aa27.65■■■□□ 2.02
SPSB3-208ENST00000566339 RARSP54136 660 aaKnown RBP27.65■■■□□ 2.02
SPSB3-208ENST00000566339 NSD3Q9BZ95 1437 aa27.64■■■□□ 2.02
SPSB3-208ENST00000566339 UPF2Q9HAU5 1272 aaKnown RBP27.63■■■□□ 2.01
SPSB3-208ENST00000566339 DIP2CQ9Y2E4 1556 aa27.63■■■□□ 2.01
SPSB3-208ENST00000566339 MORC1Q86VD1 984 aa27.63■■■□□ 2.01
SPSB3-208ENST00000566339 CFAP53Q96M91 514 aa27.62■■■□□ 2.01
SPSB3-208ENST00000566339 DMRT2Q9Y5R5 561 aa27.61■■■□□ 2.01
SPSB3-208ENST00000566339 FRAT2O75474 233 aaPredicted RBP27.6■■■□□ 2.01
SPSB3-208ENST00000566339 PLPPR3Q6T4P5 718 aa27.6■■■□□ 2.01
SPSB3-208ENST00000566339 RIMS1Q86UR5 1692 aaKnown RBP27.6■■■□□ 2.01
SPSB3-208ENST00000566339 MYH16Q9H6N6 1097 aa27.6■■■□□ 2.01
SPSB3-208ENST00000566339 RWDD1Q9H446 243 aaPredicted RBP27.59■■■□□ 2.01
SPSB3-208ENST00000566339 C14orf93Q9H972 538 aaKnown RBP27.59■■■□□ 2.01
SPSB3-208ENST00000566339 COG6Q9Y2V7 657 aa27.59■■■□□ 2.01
SPSB3-208ENST00000566339 ADGRB2O60241 1585 aa27.59■■■□□ 2.01
SPSB3-208ENST00000566339 PANK1Q8TE04 598 aa27.56■■■□□ 2
SPSB3-208ENST00000566339 ARHGEF28Q8N1W1 1705 aaKnown RBP27.56■■■□□ 2
SPSB3-208ENST00000566339 TCP11L2Q8N4U5 519 aa27.55■■■□□ 2
SPSB3-208ENST00000566339 TBC1D32Q96NH3 1257 aa27.55■■■□□ 2
SPSB3-208ENST00000566339 BRPF3Q9ULD4 1205 aa27.53■■■□□ 2
SPSB3-208ENST00000566339 CFAP65Q6ZU64 1925 aaKnown RBP27.53■■■□□ 2
SPSB3-208ENST00000566339 NEXMIFQ5QGS0 1516 aa27.53■■■□□ 2
SPSB3-208ENST00000566339 FER1L4A9Z1Z3 1794 aa27.53■■■□□ 2
SPSB3-208ENST00000566339 FAM43AQ8N2R8 423 aa27.53■■■□□ 2
SPSB3-208ENST00000566339 ARHGAP31Q2M1Z3 1444 aa27.51■■■□□ 2
SPSB3-208ENST00000566339 L1TD1Q5T7N2 865 aaKnown RBP27.51■■□□□ 1.99
SPSB3-208ENST00000566339 REREQ9P2R6 1566 aa27.51■■□□□ 1.99
SPSB3-208ENST00000566339 ANKRD36BQ8N2N9 1353 aa27.5■■□□□ 1.99
SPSB3-208ENST00000566339 ANTXR1Q9H6X2 564 aa27.5■■□□□ 1.99
SPSB3-208ENST00000566339 PDZRN3Q9UPQ7 1066 aa27.48■■□□□ 1.99
SPSB3-208ENST00000566339 MVPQ14764 893 aaKnown RBP27.47■■□□□ 1.99
SPSB3-208ENST00000566339 PCDHB15Q9Y5E8 787 aa27.47■■□□□ 1.99
SPSB3-208ENST00000566339 SEC24BO95487 1268 aa27.45■■□□□ 1.99
SPSB3-208ENST00000566339 ZKSCAN2Q63HK3 967 aa27.45■■□□□ 1.99
SPSB3-208ENST00000566339 ABCC11Q96J66 1382 aa27.45■■□□□ 1.98
SPSB3-208ENST00000566339 TULP4Q9NRJ4 1543 aa27.45■■□□□ 1.98
SPSB3-208ENST00000566339 IL16Q14005 1332 aa27.44■■□□□ 1.98
SPSB3-208ENST00000566339 EVC2Q86UK5 1308 aa27.44■■□□□ 1.98
SPSB3-208ENST00000566339 AGLP35573 1532 aa27.43■■□□□ 1.98
SPSB3-208ENST00000566339 MTHFSP49914 203 aa27.43■■□□□ 1.98
SPSB3-208ENST00000566339 RTN4Q9NQC3 1192 aaKnown RBP27.43■■□□□ 1.98
SPSB3-208ENST00000566339 ZFYVE9O95405 1425 aa27.43■■□□□ 1.98
SPSB3-208ENST00000566339 HDAC1Q13547 482 aaPredicted RBP27.43■■□□□ 1.98
SPSB3-208ENST00000566339 ANO8Q9HCE9 1232 aaPredicted RBP27.43■■□□□ 1.98
SPSB3-208ENST00000566339 CEBPAP49715 358 aaPredicted RBP27.42■■□□□ 1.98
SPSB3-208ENST00000566339 SLC12A5Q9H2X9 1139 aa27.42■■□□□ 1.98
SPSB3-208ENST00000566339 MED14O60244 1454 aa27.41■■□□□ 1.98
SPSB3-208ENST00000566339 RLBP1P12271 317 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms