RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 NUTM2AQ8IVF1 878 aaPredicted RBP27.12■■□□□ 1.93
USB1-213ENST00000566292 NRXN1Q9ULB1 1477 aa27.12■■□□□ 1.93
USB1-213ENST00000566292 PNPLA6Q8IY17 1366 aa27.1■■□□□ 1.93
USB1-213ENST00000566292 ABCC11Q96J66 1382 aa27.1■■□□□ 1.93
USB1-213ENST00000566292 WAPLQ7Z5K2 1190 aa27.1■■□□□ 1.93
USB1-213ENST00000566292 MYOM2P54296 1465 aa27.1■■□□□ 1.93
USB1-213ENST00000566292 PLEKHH1Q9ULM0 1364 aa27.09■■□□□ 1.93
USB1-213ENST00000566292 YTHDC2Q9H6S0 1430 aaKnown RBP27.08■■□□□ 1.93
USB1-213ENST00000566292 SOS2Q07890 1332 aaPredicted RBP27.07■■□□□ 1.92
USB1-213ENST00000566292 ZNF772Q68DY9 489 aaPredicted RBP27.06■■□□□ 1.92
USB1-213ENST00000566292 C14orf93Q9H972 538 aaKnown RBP27.06■■□□□ 1.92
USB1-213ENST00000566292 FMN2Q9NZ56 1722 aa27.04■■□□□ 1.92
USB1-213ENST00000566292 CFAP70Q5T0N1 1121 aa27.03■■□□□ 1.92
USB1-213ENST00000566292 ESCO1Q5FWF5 840 aa27.01■■□□□ 1.91
USB1-213ENST00000566292 AFF2P51816 1311 aa26.99■■□□□ 1.91
USB1-213ENST00000566292 HRCP23327 699 aa26.99■■□□□ 1.91
USB1-213ENST00000566292 COL22A1Q8NFW1 1626 aaPredicted RBP26.98■■□□□ 1.91
USB1-213ENST00000566292 NUTM2FA1L443 756 aa26.98■■□□□ 1.91
USB1-213ENST00000566292 SIRT1Q96EB6 747 aa26.98■■□□□ 1.91
USB1-213ENST00000566292 PXDNQ92626 1479 aa26.98■■□□□ 1.91
USB1-213ENST00000566292 DHX57Q6P158 1386 aaKnown RBP26.97■■□□□ 1.91
USB1-213ENST00000566292 RGPD8O14715 1765 aaPredicted RBP26.97■■□□□ 1.91
USB1-213ENST00000566292 C8orf37Q96NL8 207 aa26.96■■□□□ 1.91
USB1-213ENST00000566292 NPHP3Q7Z494 1330 aa26.95■■□□□ 1.91
USB1-213ENST00000566292 ADGRB1O14514 1584 aa26.93■■□□□ 1.9
USB1-213ENST00000566292 KIF1AQ12756 1690 aa26.93■■□□□ 1.9
USB1-213ENST00000566292 FOXO3O43524 673 aa26.93■■□□□ 1.9
USB1-213ENST00000566292 DLC1Q96QB1 1528 aa26.92■■□□□ 1.9
USB1-213ENST00000566292 ADAMTS2O95450 1211 aa26.92■■□□□ 1.9
USB1-213ENST00000566292 RXRBP28702 533 aa26.91■■□□□ 1.9
USB1-213ENST00000566292 XPCQ01831 940 aaPredicted RBP26.91■■□□□ 1.9
USB1-213ENST00000566292 PRAM1Q96QH2 718 aa26.89■■□□□ 1.9
USB1-213ENST00000566292 CDK12Q9NYV4 1490 aaPredicted RBP26.88■■□□□ 1.89
USB1-213ENST00000566292 MARF1Q9Y4F3 1742 aaKnown RBP26.88■■□□□ 1.89
USB1-213ENST00000566292 DCAF11Q8TEB1 546 aa26.88■■□□□ 1.89
USB1-213ENST00000566292 KDM2AQ9Y2K7 1162 aa26.88■■□□□ 1.89
USB1-213ENST00000566292 SAFB2Q14151 953 aaKnown RBP eCLIP26.87■■□□□ 1.89
USB1-213ENST00000566292 NGLY1Q96IV0 654 aa26.87■■□□□ 1.89
USB1-213ENST00000566292 QTRT2Q9H974 415 aaKnown RBP26.85■■□□□ 1.89
USB1-213ENST00000566292 ADGRB2O60241 1585 aa26.84■■□□□ 1.89
USB1-213ENST00000566292 USP32Q8NFA0 1604 aa26.84■■□□□ 1.89
USB1-213ENST00000566292 POGKQ9P215 609 aa26.82■■□□□ 1.88
USB1-213ENST00000566292 STAC3Q96MF2 364 aa26.81■■□□□ 1.88
USB1-213ENST00000566292 TRAK1Q9UPV9 953 aa26.81■■□□□ 1.88
USB1-213ENST00000566292 RBM6P78332 1123 aaKnown RBP26.8■■□□□ 1.88
USB1-213ENST00000566292 PHF8Q9UPP1 1060 aa26.8■■□□□ 1.88
USB1-213ENST00000566292 RGS12O14924 1447 aa26.8■■□□□ 1.88
USB1-213ENST00000566292 SPATA31A3Q5VYP0 1347 aa26.79■■□□□ 1.88
USB1-213ENST00000566292 KRT28Q7Z3Y7 464 aa26.78■■□□□ 1.88
USB1-213ENST00000566292 FNBP4Q8N3X1 1017 aaPredicted RBP26.78■■□□□ 1.88
USB1-213ENST00000566292 USP21Q9UK80 565 aa26.78■■□□□ 1.88
USB1-213ENST00000566292 ARHGEF28Q8N1W1 1705 aaKnown RBP26.78■■□□□ 1.88
USB1-213ENST00000566292 UPF1Q92900 1129 aaKnown RBP eCLIP26.77■■□□□ 1.88
USB1-213ENST00000566292 ANKARQ7Z5J8 1434 aa26.76■■□□□ 1.87
USB1-213ENST00000566292 HIRIP3Q9BW71 556 aaPredicted RBP26.75■■□□□ 1.87
USB1-213ENST00000566292 ATRNO75882 1429 aa26.73■■□□□ 1.87
USB1-213ENST00000566292 TNS3Q68CZ2 1445 aa26.73■■□□□ 1.87
USB1-213ENST00000566292 MINK1Q8N4C8 1332 aaPredicted RBP26.73■■□□□ 1.87
USB1-213ENST00000566292 TRPC5Q9UL62 973 aaPredicted RBP26.72■■□□□ 1.87
USB1-213ENST00000566292 BCL9LQ86UU0 1499 aa26.72■■□□□ 1.87
USB1-213ENST00000566292 ABCA3Q99758 1704 aa26.71■■□□□ 1.87
USB1-213ENST00000566292 KIAA1210Q9ULL0 1709 aa26.71■■□□□ 1.87
USB1-213ENST00000566292 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.7■■□□□ 1.87
USB1-213ENST00000566292 TULP4Q9NRJ4 1543 aa26.7■■□□□ 1.87
USB1-213ENST00000566292 PMFBP1Q8TBY8 1022 aa26.7■■□□□ 1.86
USB1-213ENST00000566292 SBNO1A3KN83 1393 aa26.7■■□□□ 1.86
USB1-213ENST00000566292 PRR36Q9H6K5 1346 aa26.69■■□□□ 1.86
USB1-213ENST00000566292 PSME1Q06323 249 aa26.69■■□□□ 1.86
USB1-213ENST00000566292 TRPM3Q9HCF6 1732 aaPredicted RBP26.69■■□□□ 1.86
USB1-213ENST00000566292 WASLO00401 505 aaPredicted RBP26.67■■□□□ 1.86
USB1-213ENST00000566292 EIF3AQ14152 1382 aaKnown RBP26.66■■□□□ 1.86
USB1-213ENST00000566292 SLIT2O94813 1529 aa26.65■■□□□ 1.86
USB1-213ENST00000566292 CABLES1Q8TDN4 633 aa26.64■■□□□ 1.86
USB1-213ENST00000566292 ALS2Q96Q42 1657 aa26.63■■□□□ 1.85
USB1-213ENST00000566292 ITSN1Q15811 1721 aa26.63■■□□□ 1.85
USB1-213ENST00000566292 ARHGEF10O15013 1369 aa26.62■■□□□ 1.85
USB1-213ENST00000566292 PLCH1Q4KWH8 1693 aa26.62■■□□□ 1.85
USB1-213ENST00000566292 LMOD2Q6P5Q4 547 aa26.61■■□□□ 1.85
USB1-213ENST00000566292 PLEKHG5O94827 1062 aa26.6■■□□□ 1.85
USB1-213ENST00000566292 ATP7BP35670 1465 aa26.6■■□□□ 1.85
USB1-213ENST00000566292 GLI3P10071 1580 aa26.59■■□□□ 1.85
USB1-213ENST00000566292 UNC5CLQ8IV45 518 aa26.59■■□□□ 1.85
USB1-213ENST00000566292 NWD2Q9ULI1 1742 aa26.59■■□□□ 1.85
USB1-213ENST00000566292 HAP1P54257 671 aaPredicted RBP26.58■■□□□ 1.85
USB1-213ENST00000566292 NBPF1Q3BBV0 1214 aa26.58■■□□□ 1.85
USB1-213ENST00000566292 GJD4Q96KN9 370 aaPredicted RBP26.58■■□□□ 1.85
USB1-213ENST00000566292 GPRASP1Q5JY77 1395 aa26.58■■□□□ 1.84
USB1-213ENST00000566292 TOPAZ1Q8N9V7 1692 aa26.56■■□□□ 1.84
USB1-213ENST00000566292 CRYBG1Q9Y4K1 1723 aa26.56■■□□□ 1.84
USB1-213ENST00000566292 RALGAPBQ86X10 1494 aa26.55■■□□□ 1.84
USB1-213ENST00000566292 ATAD2Q6PL18 1390 aa26.55■■□□□ 1.84
USB1-213ENST00000566292 NUDT16Q96DE0 195 aaKnown RBP26.54■■□□□ 1.84
USB1-213ENST00000566292 NGDNQ8NEJ9 315 aaKnown RBP26.53■■□□□ 1.84
USB1-213ENST00000566292 CDK19Q9BWU1 502 aa26.52■■□□□ 1.84
USB1-213ENST00000566292 BRWD3Q6RI45 1802 aa26.51■■□□□ 1.83
USB1-213ENST00000566292 NRAPQ86VF7 1730 aa26.51■■□□□ 1.83
USB1-213ENST00000566292 L3MBTL2Q969R5 705 aa26.5■■□□□ 1.83
USB1-213ENST00000566292 FAM83GA6ND36 823 aa26.49■■□□□ 1.83
USB1-213ENST00000566292 SIN3AQ96ST3 1273 aa26.49■■□□□ 1.83
USB1-213ENST00000566292 EP400Q96L91 3159 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms