RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 SETBP1Q9Y6X0 1596 aa4.33□□□□□ -1.72
CHD9-216ENST00000565803 PTMSP20962 102 aa4.33□□□□□ -1.72
CHD9-216ENST00000565803 PHLPP1O60346 1717 aa4.33□□□□□ -1.72
CHD9-216ENST00000565803 COL22A1Q8NFW1 1626 aaPredicted RBP4.33□□□□□ -1.72
CHD9-216ENST00000565803 HSPA2P54652 639 aa4.33□□□□□ -1.72
CHD9-216ENST00000565803 MFSD10Q14728 455 aa4.33□□□□□ -1.72
CHD9-216ENST00000565803 CD44P16070 742 aaKnown RBP4.32□□□□□ -1.72
CHD9-216ENST00000565803 DCAF8Q5TAQ9 597 aa4.32□□□□□ -1.72
CHD9-216ENST00000565803 MROH1Q8NDA8 1641 aa4.32□□□□□ -1.72
CHD9-216ENST00000565803 NCOA3Q9Y6Q9 1424 aa4.32□□□□□ -1.72
CHD9-216ENST00000565803 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.32□□□□□ -1.72
CHD9-216ENST00000565803 CERS3Q8IU89 383 aa4.32□□□□□ -1.72
CHD9-216ENST00000565803 TOM1O60784 492 aa4.32□□□□□ -1.72
CHD9-216ENST00000565803 P3H3Q8IVL6 736 aa4.32□□□□□ -1.72
CHD9-216ENST00000565803 TIAM1Q13009 1591 aa4.31□□□□□ -1.72
CHD9-216ENST00000565803 CLTCQ00610 1675 aaKnown RBP4.31□□□□□ -1.72
CHD9-216ENST00000565803 PYGBP11216 843 aa4.31□□□□□ -1.72
CHD9-216ENST00000565803 CCDC97Q96F63 343 aaPredicted RBP4.31□□□□□ -1.72
CHD9-216ENST00000565803 SLIT1O75093 1534 aa4.31□□□□□ -1.72
CHD9-216ENST00000565803 ABCC1P33527 1531 aa4.31□□□□□ -1.72
CHD9-216ENST00000565803 IER5LQ5T953 404 aa4.31□□□□□ -1.72
CHD9-216ENST00000565803 NLRP1Q9C000 1473 aa4.31□□□□□ -1.72
CHD9-216ENST00000565803 PREX2Q70Z35 1606 aa4.31□□□□□ -1.72
CHD9-216ENST00000565803 RGPD3A6NKT7 1758 aaPredicted RBP4.31□□□□□ -1.72
CHD9-216ENST00000565803 RGPD4Q7Z3J3 1758 aa4.31□□□□□ -1.72
CHD9-216ENST00000565803 PLCH2O75038 1416 aa4.31□□□□□ -1.72
CHD9-216ENST00000565803 KDM4AO75164 1064 aa4.31□□□□□ -1.72
CHD9-216ENST00000565803 PSEN1P49768 467 aa4.31□□□□□ -1.72
CHD9-216ENST00000565803 MKRN3Q13064 507 aaKnown RBP4.31□□□□□ -1.72
CHD9-216ENST00000565803 KIF27Q86VH2 1401 aa4.31□□□□□ -1.72
CHD9-216ENST00000565803 MARF1Q9Y4F3 1742 aaKnown RBP4.31□□□□□ -1.72
CHD9-216ENST00000565803 IRX5P78411 483 aaPredicted RBP4.3□□□□□ -1.72
CHD9-216ENST00000565803 RSPH4AQ5TD94 716 aa4.3□□□□□ -1.72
CHD9-216ENST00000565803 KRI1Q8N9T8 703 aaKnown RBP4.3□□□□□ -1.72
CHD9-216ENST00000565803 NKTRP30414 1462 aaKnown RBP4.3□□□□□ -1.72
CHD9-216ENST00000565803 ZNF777Q9ULD5 760 aaPredicted RBP4.3□□□□□ -1.72
CHD9-216ENST00000565803 TRPC6Q9Y210 931 aa4.3□□□□□ -1.72
CHD9-216ENST00000565803 COL24A1Q17RW2 1714 aa4.3□□□□□ -1.72
CHD9-216ENST00000565803 TICAM2Q86XR7 235 aa4.29□□□□□ -1.72
CHD9-216ENST00000565803 RGS22Q8NE09 1264 aa4.29□□□□□ -1.72
CHD9-216ENST00000565803 BMP2KQ9NSY1 1161 aaPredicted RBP4.29□□□□□ -1.72
CHD9-216ENST00000565803 UBAP1LF5GYI3 381 aa4.29□□□□□ -1.72
CHD9-216ENST00000565803 ATMINO43313 823 aaPredicted RBP4.29□□□□□ -1.72
CHD9-216ENST00000565803 MS4A3Q96HJ5 214 aa4.29□□□□□ -1.72
CHD9-216ENST00000565803 PHF12Q96QT6 1004 aa4.29□□□□□ -1.72
CHD9-216ENST00000565803 UGGT1Q9NYU2 1555 aa4.29□□□□□ -1.72
CHD9-216ENST00000565803 KIF3CO14782 793 aa4.29□□□□□ -1.72
CHD9-216ENST00000565803 NCLP19338 710 aaKnown RBP4.29□□□□□ -1.72
CHD9-216ENST00000565803 CAMK2BQ13554 666 aa4.29□□□□□ -1.72
CHD9-216ENST00000565803 POTEAQ6S8J7 498 aa4.29□□□□□ -1.72
CHD9-216ENST00000565803 PRDM10Q9NQV6 1147 aa4.29□□□□□ -1.72
CHD9-216ENST00000565803 RREB1Q92766 1687 aa4.29□□□□□ -1.72
CHD9-216ENST00000565803 ZNF316A6NFI3 1004 aaPredicted RBP4.28□□□□□ -1.72
CHD9-216ENST00000565803 NOL8Q76FK4 1167 aaKnown RBP4.28□□□□□ -1.72
CHD9-216ENST00000565803 PDCD7Q8N8D1 485 aaKnown RBP4.28□□□□□ -1.72
CHD9-216ENST00000565803 ZC3H15Q8WU90 426 aaKnown RBP4.28□□□□□ -1.72
CHD9-216ENST00000565803 RYDENQ9NUL5 291 aaKnown RBP4.28□□□□□ -1.72
CHD9-216ENST00000565803 PTPN23Q9H3S7 1636 aa4.28□□□□□ -1.72
CHD9-216ENST00000565803 UBR1Q8IWV7 1749 aa4.28□□□□□ -1.72
CHD9-216ENST00000565803 POTEFA5A3E0 1075 aa4.28□□□□□ -1.72
CHD9-216ENST00000565803 PCDHB8Q9UN66 801 aa4.28□□□□□ -1.72
CHD9-216ENST00000565803 PCDHB13Q9Y5F0 798 aa4.28□□□□□ -1.72
CHD9-216ENST00000565803 GPATCH8Q9UKJ3 1502 aaKnown RBP4.28□□□□□ -1.72
CHD9-216ENST00000565803 LRP6O75581 1613 aa4.28□□□□□ -1.72
CHD9-216ENST00000565803 TTLL13PA6NNM8 815 aa4.28□□□□□ -1.72
CHD9-216ENST00000565803 POTEIP0CG38 1075 aa4.28□□□□□ -1.72
CHD9-216ENST00000565803 CLUAP1Q96AJ1 413 aa4.28□□□□□ -1.72
CHD9-216ENST00000565803 ZRANB1Q9UGI0 708 aa4.28□□□□□ -1.72
CHD9-216ENST00000565803 CDC42BPBQ9Y5S2 1711 aa4.28□□□□□ -1.72
CHD9-216ENST00000565803 RAPGEF3O95398 923 aa4.27□□□□□ -1.73
CHD9-216ENST00000565803 CCDC125Q86Z20 511 aa4.27□□□□□ -1.73
CHD9-216ENST00000565803 NUP153P49790 1475 aaKnown RBP4.27□□□□□ -1.73
CHD9-216ENST00000565803 FGD1P98174 961 aa4.27□□□□□ -1.73
CHD9-216ENST00000565803 CRISPLD2Q9H0B8 497 aa4.27□□□□□ -1.73
CHD9-216ENST00000565803 PZPP20742 1482 aa4.27□□□□□ -1.73
CHD9-216ENST00000565803 PLEKHH2Q8IVE3 1493 aa4.27□□□□□ -1.73
CHD9-216ENST00000565803 SPATA31A6Q5VVP1 1343 aa4.26□□□□□ -1.73
CHD9-216ENST00000565803 ZNF335Q9H4Z2 1342 aaPredicted RBP4.26□□□□□ -1.73
CHD9-216ENST00000565803 SMARCA5O60264 1052 aaPredicted RBP4.26□□□□□ -1.73
CHD9-216ENST00000565803 NEXMIFQ5QGS0 1516 aa4.26□□□□□ -1.73
CHD9-216ENST00000565803 RGPD1P0DJD0 1748 aa4.26□□□□□ -1.73
CHD9-216ENST00000565803 DISP2A7MBM2 1401 aa4.26□□□□□ -1.73
CHD9-216ENST00000565803 CADPS2Q86UW7 1296 aa4.26□□□□□ -1.73
CHD9-216ENST00000565803 RGS12O14924 1447 aa4.25□□□□□ -1.73
CHD9-216ENST00000565803 TET3O43151 1660 aa4.25□□□□□ -1.73
CHD9-216ENST00000565803 PLCD4Q9BRC7 762 aa4.25□□□□□ -1.73
CHD9-216ENST00000565803 CARMIL1Q5VZK9 1371 aa4.25□□□□□ -1.73
CHD9-216ENST00000565803 GALR2O43603 387 aaPredicted RBP4.25□□□□□ -1.73
CHD9-216ENST00000565803 CCDC27Q2M243 656 aa4.25□□□□□ -1.73
CHD9-216ENST00000565803 RETREG2Q8NC44 543 aa4.25□□□□□ -1.73
CHD9-216ENST00000565803 TSPYL2Q9H2G4 693 aaPredicted RBP4.25□□□□□ -1.73
CHD9-216ENST00000565803 TMED8Q6PL24 325 aaPredicted RBP4.25□□□□□ -1.73
CHD9-216ENST00000565803 CCER1Q8TC90 406 aaPredicted RBP4.25□□□□□ -1.73
CHD9-216ENST00000565803 RALGAPBQ86X10 1494 aa4.24□□□□□ -1.73
CHD9-216ENST00000565803 SCAF11Q99590 1463 aaKnown RBP4.24□□□□□ -1.73
CHD9-216ENST00000565803 JCADQ9P266 1359 aa4.24□□□□□ -1.73
CHD9-216ENST00000565803 NPHP4O75161 1426 aaPredicted RBP4.24□□□□□ -1.73
CHD9-216ENST00000565803 GABBR2O75899 941 aa4.24□□□□□ -1.73
CHD9-216ENST00000565803 KCNV2Q8TDN2 545 aa4.24□□□□□ -1.73
CHD9-216ENST00000565803 EIF2AK4Q9P2K8 1649 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms