RNA–Protein interactions for RNA: ENST00000565626.1

NSMCE1-210, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 259 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-210ENST00000565626 YTHDC2Q9H6S0 1430 aaKnown RBP16.1■□□□□ 0.17
NSMCE1-210ENST00000565626 NRXN1Q9ULB1 1477 aa16.1■□□□□ 0.17
NSMCE1-210ENST00000565626 NHSL1Q5SYE7 1610 aa16.08■□□□□ 0.17
NSMCE1-210ENST00000565626 NUTM2FA1L443 756 aa16.08■□□□□ 0.16
NSMCE1-210ENST00000565626 MYOM2P54296 1465 aa16.08■□□□□ 0.16
NSMCE1-210ENST00000565626 MEX3CQ5U5Q3 659 aaKnown RBP16.07■□□□□ 0.16
NSMCE1-210ENST00000565626 LRRC59Q96AG4 307 aaKnown RBP16.07■□□□□ 0.16
NSMCE1-210ENST00000565626 KDM2AQ9Y2K7 1162 aa16.07■□□□□ 0.16
NSMCE1-210ENST00000565626 SHPRHQ149N8 1683 aa16.06■□□□□ 0.16
NSMCE1-210ENST00000565626 ESCO1Q5FWF5 840 aa16.05■□□□□ 0.16
NSMCE1-210ENST00000565626 DCAF11Q8TEB1 546 aa16.05■□□□□ 0.16
NSMCE1-210ENST00000565626 CDC42BPGQ6DT37 1551 aa16.04■□□□□ 0.16
NSMCE1-210ENST00000565626 PNPLA6Q8IY17 1366 aa16.04■□□□□ 0.16
NSMCE1-210ENST00000565626 SAFB2Q14151 953 aaKnown RBP eCLIP16.04■□□□□ 0.16
NSMCE1-210ENST00000565626 DHX57Q6P158 1386 aaKnown RBP16.03■□□□□ 0.16
NSMCE1-210ENST00000565626 SOS2Q07890 1332 aaPredicted RBP16.03■□□□□ 0.16
NSMCE1-210ENST00000565626 KNDC1Q76NI1 1749 aa16.02■□□□□ 0.16
NSMCE1-210ENST00000565626 XPCQ01831 940 aaPredicted RBP16.02■□□□□ 0.16
NSMCE1-210ENST00000565626 PRAM1Q96QH2 718 aa16.02■□□□□ 0.16
NSMCE1-210ENST00000565626 FOXO3O43524 673 aa16.01■□□□□ 0.15
NSMCE1-210ENST00000565626 SIRT1Q96EB6 747 aa16.01■□□□□ 0.15
NSMCE1-210ENST00000565626 TRAK1Q9UPV9 953 aa16■□□□□ 0.15
NSMCE1-210ENST00000565626 LAMC1P11047 1609 aa16■□□□□ 0.15
NSMCE1-210ENST00000565626 ADAMTS2O95450 1211 aa15.99■□□□□ 0.15
NSMCE1-210ENST00000565626 ADGRB1O14514 1584 aa15.99■□□□□ 0.15
NSMCE1-210ENST00000565626 ZNF772Q68DY9 489 aaPredicted RBP15.98■□□□□ 0.15
NSMCE1-210ENST00000565626 C8orf37Q96NL8 207 aa15.98■□□□□ 0.15
NSMCE1-210ENST00000565626 POGKQ9P215 609 aa15.98■□□□□ 0.15
NSMCE1-210ENST00000565626 AFF2P51816 1311 aa15.97■□□□□ 0.15
NSMCE1-210ENST00000565626 NPHP3Q7Z494 1330 aa15.97■□□□□ 0.15
NSMCE1-210ENST00000565626 PXDNQ92626 1479 aa15.97■□□□□ 0.15
NSMCE1-210ENST00000565626 HIRIP3Q9BW71 556 aaPredicted RBP15.96■□□□□ 0.15
NSMCE1-210ENST00000565626 FMN2Q9NZ56 1722 aa15.95■□□□□ 0.14
NSMCE1-210ENST00000565626 DLC1Q96QB1 1528 aa15.94■□□□□ 0.14
NSMCE1-210ENST00000565626 MINK1Q8N4C8 1332 aaPredicted RBP15.94■□□□□ 0.14
NSMCE1-210ENST00000565626 NGLY1Q96IV0 654 aa15.93■□□□□ 0.14
NSMCE1-210ENST00000565626 STAC3Q96MF2 364 aa15.93■□□□□ 0.14
NSMCE1-210ENST00000565626 PHF8Q9UPP1 1060 aa15.93■□□□□ 0.14
NSMCE1-210ENST00000565626 RXRBP28702 533 aa15.91■□□□□ 0.14
NSMCE1-210ENST00000565626 KRT28Q7Z3Y7 464 aa15.91■□□□□ 0.14
NSMCE1-210ENST00000565626 PMFBP1Q8TBY8 1022 aa15.9■□□□□ 0.14
NSMCE1-210ENST00000565626 NBPF1Q3BBV0 1214 aa15.89■□□□□ 0.13
NSMCE1-210ENST00000565626 SIN3AQ96ST3 1273 aa15.89■□□□□ 0.13
NSMCE1-210ENST00000565626 QTRT2Q9H974 415 aaKnown RBP15.89■□□□□ 0.13
NSMCE1-210ENST00000565626 RGPD8O14715 1765 aaPredicted RBP15.89■□□□□ 0.13
NSMCE1-210ENST00000565626 SPATA31A3Q5VYP0 1347 aa15.89■□□□□ 0.13
NSMCE1-210ENST00000565626 PRR36Q9H6K5 1346 aa15.89■□□□□ 0.13
NSMCE1-210ENST00000565626 COL22A1Q8NFW1 1626 aaPredicted RBP15.88■□□□□ 0.13
NSMCE1-210ENST00000565626 PLEKHG5O94827 1062 aa15.88■□□□□ 0.13
NSMCE1-210ENST00000565626 USP32Q8NFA0 1604 aa15.87■□□□□ 0.13
NSMCE1-210ENST00000565626 WASLO00401 505 aaPredicted RBP15.87■□□□□ 0.13
NSMCE1-210ENST00000565626 USP21Q9UK80 565 aa15.87■□□□□ 0.13
NSMCE1-210ENST00000565626 ADGRB2O60241 1585 aa15.87■□□□□ 0.13
NSMCE1-210ENST00000565626 ANKARQ7Z5J8 1434 aa15.86■□□□□ 0.13
NSMCE1-210ENST00000565626 KIF1AQ12756 1690 aa15.86■□□□□ 0.13
NSMCE1-210ENST00000565626 FNBP4Q8N3X1 1017 aaPredicted RBP15.86■□□□□ 0.13
NSMCE1-210ENST00000565626 PSME1Q06323 249 aa15.85■□□□□ 0.13
NSMCE1-210ENST00000565626 CABLES1Q8TDN4 633 aa15.85■□□□□ 0.13
NSMCE1-210ENST00000565626 L3MBTL2Q969R5 705 aa15.85■□□□□ 0.13
NSMCE1-210ENST00000565626 RBM6P78332 1123 aaKnown RBP15.84■□□□□ 0.13
NSMCE1-210ENST00000565626 NEUROD1Q13562 356 aa15.84■□□□□ 0.13
NSMCE1-210ENST00000565626 LMOD2Q6P5Q4 547 aa15.84■□□□□ 0.13
NSMCE1-210ENST00000565626 TNS3Q68CZ2 1445 aa15.84■□□□□ 0.13
NSMCE1-210ENST00000565626 RGS12O14924 1447 aa15.83■□□□□ 0.12
NSMCE1-210ENST00000565626 ARHGEF28Q8N1W1 1705 aaKnown RBP15.82■□□□□ 0.12
NSMCE1-210ENST00000565626 SBNO1A3KN83 1393 aa15.82■□□□□ 0.12
NSMCE1-210ENST00000565626 TULP4Q9NRJ4 1543 aa15.82■□□□□ 0.12
NSMCE1-210ENST00000565626 BCL9LQ86UU0 1499 aa15.81■□□□□ 0.12
NSMCE1-210ENST00000565626 CDK19Q9BWU1 502 aa15.81■□□□□ 0.12
NSMCE1-210ENST00000565626 CDK12Q9NYV4 1490 aaPredicted RBP15.81■□□□□ 0.12
NSMCE1-210ENST00000565626 TRPC5Q9UL62 973 aaPredicted RBP15.81■□□□□ 0.12
NSMCE1-210ENST00000565626 EIF3AQ14152 1382 aaKnown RBP15.8■□□□□ 0.12
NSMCE1-210ENST00000565626 UPF1Q92900 1129 aaKnown RBP eCLIP15.8■□□□□ 0.12
NSMCE1-210ENST00000565626 NUDT16Q96DE0 195 aaKnown RBP15.8■□□□□ 0.12
NSMCE1-210ENST00000565626 ATRNO75882 1429 aa15.79■□□□□ 0.12
NSMCE1-210ENST00000565626 HAP1P54257 671 aaPredicted RBP15.79■□□□□ 0.12
NSMCE1-210ENST00000565626 NGDNQ8NEJ9 315 aaKnown RBP15.79■□□□□ 0.12
NSMCE1-210ENST00000565626 KIAA1210Q9ULL0 1709 aa15.79■□□□□ 0.12
NSMCE1-210ENST00000565626 ATP7BP35670 1465 aa15.78■□□□□ 0.12
NSMCE1-210ENST00000565626 ARHGEF10O15013 1369 aa15.77■□□□□ 0.12
NSMCE1-210ENST00000565626 GPRASP1Q5JY77 1395 aa15.77■□□□□ 0.12
NSMCE1-210ENST00000565626 CENPJQ9HC77 1338 aaPredicted RBP15.75■□□□□ 0.11
NSMCE1-210ENST00000565626 SLIT2O94813 1529 aa15.75■□□□□ 0.11
NSMCE1-210ENST00000565626 TRPM3Q9HCF6 1732 aaPredicted RBP15.75■□□□□ 0.11
NSMCE1-210ENST00000565626 MARF1Q9Y4F3 1742 aaKnown RBP15.75■□□□□ 0.11
NSMCE1-210ENST00000565626 PAK3O75914 559 aaPredicted RBP15.75■□□□□ 0.11
NSMCE1-210ENST00000565626 UNC5CLQ8IV45 518 aa15.75■□□□□ 0.11
NSMCE1-210ENST00000565626 EP400Q96L91 3159 aa15.74■□□□□ 0.11
NSMCE1-210ENST00000565626 GJD4Q96KN9 370 aaPredicted RBP15.74■□□□□ 0.11
NSMCE1-210ENST00000565626 CABP2Q9NPB3 220 aa15.74■□□□□ 0.11
NSMCE1-210ENST00000565626 FAM83GA6ND36 823 aa15.73■□□□□ 0.11
NSMCE1-210ENST00000565626 NBPF8Q3BBV2 869 aa15.73■□□□□ 0.11
NSMCE1-210ENST00000565626 CCDC61Q9Y6R9 512 aa15.73■□□□□ 0.11
NSMCE1-210ENST00000565626 ACEP12821 1306 aa15.72■□□□□ 0.11
NSMCE1-210ENST00000565626 SRPK2P78362 688 aaKnown RBP15.72■□□□□ 0.11
NSMCE1-210ENST00000565626 TRIM26Q12899 539 aaPredicted RBP15.72■□□□□ 0.11
NSMCE1-210ENST00000565626 ABCA3Q99758 1704 aa15.71■□□□□ 0.11
NSMCE1-210ENST00000565626 ALS2Q96Q42 1657 aa15.71■□□□□ 0.11
NSMCE1-210ENST00000565626 NUTM2GQ5VZR2 741 aa15.71■□□□□ 0.11
NSMCE1-210ENST00000565626 ROCK2O75116 1388 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms