RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 SF3B2Q13435 895 aaKnown RBP17.46■□□□□ 0.39
CAPN3-215ENST00000565559 CHIC2Q9UKJ5 165 aa17.46■□□□□ 0.39
CAPN3-215ENST00000565559 MYO5BQ9ULV0 1848 aa17.46■□□□□ 0.39
CAPN3-215ENST00000565559 LRP5O75197 1615 aa17.44■□□□□ 0.38
CAPN3-215ENST00000565559 KANK4Q5T7N3 995 aaPredicted RBP17.44■□□□□ 0.38
CAPN3-215ENST00000565559 ADGRL3Q9HAR2 1447 aa17.42■□□□□ 0.38
CAPN3-215ENST00000565559 GJD4Q96KN9 370 aaPredicted RBP17.41■□□□□ 0.38
CAPN3-215ENST00000565559 PTPN23Q9H3S7 1636 aa17.4■□□□□ 0.38
CAPN3-215ENST00000565559 ZBTB12Q9Y330 459 aaPredicted RBP17.4■□□□□ 0.38
CAPN3-215ENST00000565559 SOS2Q07890 1332 aaPredicted RBP17.4■□□□□ 0.38
CAPN3-215ENST00000565559 XRN1Q8IZH2 1706 aaKnown RBP17.39■□□□□ 0.37
CAPN3-215ENST00000565559 DEFB132Q7Z7B7 95 aa17.39■□□□□ 0.37
CAPN3-215ENST00000565559 VPS8Q8N3P4 1428 aa17.38■□□□□ 0.37
CAPN3-215ENST00000565559 C1orf167Q5SNV9 1468 aa17.38■□□□□ 0.37
CAPN3-215ENST00000565559 UNC13BO14795 1591 aa17.38■□□□□ 0.37
CAPN3-215ENST00000565559 MKRN4PQ13434 485 aaPredicted RBP17.38■□□□□ 0.37
CAPN3-215ENST00000565559 BCL9LQ86UU0 1499 aa17.37■□□□□ 0.37
CAPN3-215ENST00000565559 ANKRD50Q9ULJ7 1429 aa17.35■□□□□ 0.37
CAPN3-215ENST00000565559 LAMC1P11047 1609 aa17.34■□□□□ 0.37
CAPN3-215ENST00000565559 METP08581 1390 aa17.33■□□□□ 0.36
CAPN3-215ENST00000565559 PSDA5PKW4 1024 aaPredicted RBP17.33■□□□□ 0.36
CAPN3-215ENST00000565559 ORAI2Q96SN7 254 aa17.33■□□□□ 0.36
CAPN3-215ENST00000565559 MYOM2P54296 1465 aa17.32■□□□□ 0.36
CAPN3-215ENST00000565559 HRCP23327 699 aa17.32■□□□□ 0.36
CAPN3-215ENST00000565559 COL22A1Q8NFW1 1626 aaPredicted RBP17.32■□□□□ 0.36
CAPN3-215ENST00000565559 ADGRL2O95490 1459 aa17.31■□□□□ 0.36
CAPN3-215ENST00000565559 UNC5CLQ8IV45 518 aa17.3■□□□□ 0.36
CAPN3-215ENST00000565559 RALGAPBQ86X10 1494 aa17.3■□□□□ 0.36
CAPN3-215ENST00000565559 NALCNQ8IZF0 1738 aa17.3■□□□□ 0.36
CAPN3-215ENST00000565559 BAG6P46379 1132 aa17.29■□□□□ 0.36
CAPN3-215ENST00000565559 ZNF326Q5BKZ1 582 aaKnown RBP17.29■□□□□ 0.36
CAPN3-215ENST00000565559 NRXN3Q9Y4C0 1643 aa17.29■□□□□ 0.36
CAPN3-215ENST00000565559 NPHP3Q7Z494 1330 aa17.28■□□□□ 0.36
CAPN3-215ENST00000565559 YY1P25490 414 aa17.28■□□□□ 0.36
CAPN3-215ENST00000565559 SEPT12Q8IYM1 358 aa17.26■□□□□ 0.35
CAPN3-215ENST00000565559 SPHKAPQ2M3C7 1700 aa17.26■□□□□ 0.35
CAPN3-215ENST00000565559 E9PCH4 1651 aa17.25■□□□□ 0.35
CAPN3-215ENST00000565559 GLI3P10071 1580 aa17.24■□□□□ 0.35
CAPN3-215ENST00000565559 KRT27Q7Z3Y8 459 aa17.24■□□□□ 0.35
CAPN3-215ENST00000565559 IQGAP3Q86VI3 1631 aa17.24■□□□□ 0.35
CAPN3-215ENST00000565559 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.24■□□□□ 0.35
CAPN3-215ENST00000565559 ESCO1Q5FWF5 840 aa17.23■□□□□ 0.35
CAPN3-215ENST00000565559 LRPPRCP42704 1394 aaKnown RBP17.22■□□□□ 0.35
CAPN3-215ENST00000565559 SLIT2O94813 1529 aa17.21■□□□□ 0.35
CAPN3-215ENST00000565559 MARF1Q9Y4F3 1742 aaKnown RBP17.21■□□□□ 0.35
CAPN3-215ENST00000565559 FAM50AQ14320 339 aaKnown RBP17.2■□□□□ 0.34
CAPN3-215ENST00000565559 CCDC9Q9Y3X0 531 aaKnown RBP17.2■□□□□ 0.34
CAPN3-215ENST00000565559 PXDNQ92626 1479 aa17.19■□□□□ 0.34
CAPN3-215ENST00000565559 A0A0G2JS52 829 aa17.19■□□□□ 0.34
CAPN3-215ENST00000565559 FOXO3O43524 673 aa17.19■□□□□ 0.34
CAPN3-215ENST00000565559 MYT1Q01538 1121 aa17.19■□□□□ 0.34
CAPN3-215ENST00000565559 XPCQ01831 940 aaPredicted RBP17.19■□□□□ 0.34
CAPN3-215ENST00000565559 R3HDM1Q15032 1099 aaKnown RBP17.19■□□□□ 0.34
CAPN3-215ENST00000565559 ROBO2Q9HCK4 1378 aa17.18■□□□□ 0.34
CAPN3-215ENST00000565559 HAP1P54257 671 aaPredicted RBP17.18■□□□□ 0.34
CAPN3-215ENST00000565559 VPS72Q15906 364 aa17.18■□□□□ 0.34
CAPN3-215ENST00000565559 BRWD3Q6RI45 1802 aa17.17■□□□□ 0.34
CAPN3-215ENST00000565559 NUP155O75694 1391 aa17.16■□□□□ 0.34
CAPN3-215ENST00000565559 HFM1A2PYH4 1435 aa17.16■□□□□ 0.34
CAPN3-215ENST00000565559 ONECUT3O60422 494 aaPredicted RBP17.16■□□□□ 0.34
CAPN3-215ENST00000565559 EN1Q05925 392 aaPredicted RBP17.15■□□□□ 0.34
CAPN3-215ENST00000565559 PRAG1Q86YV5 1406 aa17.12■□□□□ 0.33
CAPN3-215ENST00000565559 USP32Q8NFA0 1604 aa17.11■□□□□ 0.33
CAPN3-215ENST00000565559 SPATA31A3Q5VYP0 1347 aa17.11■□□□□ 0.33
CAPN3-215ENST00000565559 NEXMIFQ5QGS0 1516 aa17.11■□□□□ 0.33
CAPN3-215ENST00000565559 CDC42BPGQ6DT37 1551 aa17.11■□□□□ 0.33
CAPN3-215ENST00000565559 VGFO15240 615 aaPredicted RBP17.1■□□□□ 0.33
CAPN3-215ENST00000565559 CCDC144AA2RUR9 1427 aa17.08■□□□□ 0.32
CAPN3-215ENST00000565559 DISP2A7MBM2 1401 aa17.06■□□□□ 0.32
CAPN3-215ENST00000565559 ROCK1Q13464 1354 aa17.06■□□□□ 0.32
CAPN3-215ENST00000565559 NUTM2FA1L443 756 aa17.06■□□□□ 0.32
CAPN3-215ENST00000565559 FAM98CQ17RN3 349 aaKnown RBP17.06■□□□□ 0.32
CAPN3-215ENST00000565559 RGPD1P0DJD0 1748 aa17.06■□□□□ 0.32
CAPN3-215ENST00000565559 KRT28Q7Z3Y7 464 aa17.05■□□□□ 0.32
CAPN3-215ENST00000565559 RBM42Q9BTD8 480 aaKnown RBP17.05■□□□□ 0.32
CAPN3-215ENST00000565559 PPP1R1BQ9UD71 204 aaPredicted RBP17.05■□□□□ 0.32
CAPN3-215ENST00000565559 NWD2Q9ULI1 1742 aa17.04■□□□□ 0.32
CAPN3-215ENST00000565559 PLEKHG5O94827 1062 aa17.04■□□□□ 0.32
CAPN3-215ENST00000565559 EZH2Q15910 746 aaKnown RBP17.04■□□□□ 0.32
CAPN3-215ENST00000565559 IFFO2Q5TF58 517 aa17.04■□□□□ 0.32
CAPN3-215ENST00000565559 NAIPQ13075 1403 aa17.04■□□□□ 0.32
CAPN3-215ENST00000565559 PSME1Q06323 249 aa17.03■□□□□ 0.32
CAPN3-215ENST00000565559 CABLES1Q8TDN4 633 aa17.03■□□□□ 0.32
CAPN3-215ENST00000565559 PLCH1Q4KWH8 1693 aa17.03■□□□□ 0.32
CAPN3-215ENST00000565559 TNS3Q68CZ2 1445 aa17.03■□□□□ 0.32
CAPN3-215ENST00000565559 PARD3Q8TEW0 1356 aa17.02■□□□□ 0.31
CAPN3-215ENST00000565559 FAM182BQ5T319 152 aa17.01■□□□□ 0.31
CAPN3-215ENST00000565559 LMOD2Q6P5Q4 547 aa17.01■□□□□ 0.31
CAPN3-215ENST00000565559 ADGRB2O60241 1585 aa17.01■□□□□ 0.31
CAPN3-215ENST00000565559 SENP3-EIF4A1A0A087X0R7 540 aa17■□□□□ 0.31
CAPN3-215ENST00000565559 KIF1AQ12756 1690 aa17■□□□□ 0.31
CAPN3-215ENST00000565559 NINLQ9Y2I6 1382 aa17■□□□□ 0.31
CAPN3-215ENST00000565559 CLTCL1P53675 1640 aa16.99■□□□□ 0.31
CAPN3-215ENST00000565559 RPGRIP1LQ68CZ1 1315 aa16.99■□□□□ 0.31
CAPN3-215ENST00000565559 FAM83GA6ND36 823 aa16.99■□□□□ 0.31
CAPN3-215ENST00000565559 NBPF8Q3BBV2 869 aa16.99■□□□□ 0.31
CAPN3-215ENST00000565559 NBPF14Q5TI25 921 aa16.99■□□□□ 0.31
CAPN3-215ENST00000565559 CAMKK2Q96RR4 588 aa16.99■□□□□ 0.31
CAPN3-215ENST00000565559 ARHGEF10O15013 1369 aa16.99■□□□□ 0.31
CAPN3-215ENST00000565559 SPON1Q9HCB6 807 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms