RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 GCGRP47871 477 aa12.43□□□□□ -0.42
CHD9-214ENST00000565119 TRIM47Q96LD4 638 aa12.43□□□□□ -0.42
CHD9-214ENST00000565119 J3QL48 77 aa12.42□□□□□ -0.42
CHD9-214ENST00000565119 MSS51Q4VC12 460 aa12.42□□□□□ -0.42
CHD9-214ENST00000565119 RNF19BQ6ZMZ0 732 aa12.42□□□□□ -0.42
CHD9-214ENST00000565119 MRGPRX2Q96LB1 330 aa12.41□□□□□ -0.42
CHD9-214ENST00000565119 TRIM32Q13049 653 aa12.4□□□□□ -0.42
CHD9-214ENST00000565119 HPS1Q92902 700 aa12.38□□□□□ -0.43
CHD9-214ENST00000565119 SENP2Q9HC62 589 aa12.38□□□□□ -0.43
CHD9-214ENST00000565119 GNPATO15228 680 aa12.36□□□□□ -0.43
CHD9-214ENST00000565119 RBM26Q5T8P6 1007 aaKnown RBP12.36□□□□□ -0.43
CHD9-214ENST00000565119 PHOX2BQ99453 314 aa12.35□□□□□ -0.43
CHD9-214ENST00000565119 GPR37O15354 613 aa12.34□□□□□ -0.43
CHD9-214ENST00000565119 SULF1Q8IWU6 871 aa12.34□□□□□ -0.43
CHD9-214ENST00000565119 MMP16P51512 607 aa12.33□□□□□ -0.44
CHD9-214ENST00000565119 KIFC2Q96AC6 838 aa12.31□□□□□ -0.44
CHD9-214ENST00000565119 P3H3Q8IVL6 736 aa12.29□□□□□ -0.44
CHD9-214ENST00000565119 GRIPAP1Q4V328 841 aa12.28□□□□□ -0.44
CHD9-214ENST00000565119 REPIN1Q9BWE0 567 aaKnown RBP12.28□□□□□ -0.44
CHD9-214ENST00000565119 DXOO77932 396 aaKnown RBP12.27□□□□□ -0.45
CHD9-214ENST00000565119 SKOR1P84550 965 aa12.27□□□□□ -0.45
CHD9-214ENST00000565119 Q3C1V9 767 aa12.27□□□□□ -0.45
CHD9-214ENST00000565119 RC3H1Q5TC82 1133 aaKnown RBP12.27□□□□□ -0.45
CHD9-214ENST00000565119 TESPA1A2RU30 521 aaPredicted RBP12.26□□□□□ -0.45
CHD9-214ENST00000565119 AMER1Q5JTC6 1135 aaPredicted RBP12.26□□□□□ -0.45
CHD9-214ENST00000565119 LORP23490 312 aaPredicted RBP12.25□□□□□ -0.45
CHD9-214ENST00000565119 RTN4Q9NQC3 1192 aaKnown RBP12.25□□□□□ -0.45
CHD9-214ENST00000565119 USB1Q9BQ65 265 aaKnown RBP12.24□□□□□ -0.45
CHD9-214ENST00000565119 GMPRP36959 345 aa12.23□□□□□ -0.45
CHD9-214ENST00000565119 CCDC24Q8N4L8 307 aa12.22□□□□□ -0.45
CHD9-214ENST00000565119 SLC16A10Q8TF71 515 aa12.22□□□□□ -0.45
CHD9-214ENST00000565119 NXF1Q9UBU9 619 aaKnown RBP12.22□□□□□ -0.45
CHD9-214ENST00000565119 WNT7BP56706 349 aa12.2□□□□□ -0.46
CHD9-214ENST00000565119 LOC100996750A0A140TA64 210 aa12.19□□□□□ -0.46
CHD9-214ENST00000565119 FAM181BA6NEQ2 426 aa12.19□□□□□ -0.46
CHD9-214ENST00000565119 ALDH1A1P00352 501 aa12.19□□□□□ -0.46
CHD9-214ENST00000565119 KRTAP4-6Q9BYQ5 205 aa12.19□□□□□ -0.46
CHD9-214ENST00000565119 CD46P15529 392 aa12.18□□□□□ -0.46
CHD9-214ENST00000565119 TRIM46Q7Z4K8 759 aa12.18□□□□□ -0.46
CHD9-214ENST00000565119 ZSCAN1Q8NBB4 408 aa12.18□□□□□ -0.46
CHD9-214ENST00000565119 HLA-CQ95604 372 aa12.18□□□□□ -0.46
CHD9-214ENST00000565119 BMP1P13497 986 aa12.17□□□□□ -0.46
CHD9-214ENST00000565119 SMYD5Q6GMV2 418 aa12.17□□□□□ -0.46
CHD9-214ENST00000565119 KDM4AO75164 1064 aa12.16□□□□□ -0.46
CHD9-214ENST00000565119 VEGFBP49765 207 aa12.16□□□□□ -0.46
CHD9-214ENST00000565119 SIAH2O43255 324 aa12.14□□□□□ -0.47
CHD9-214ENST00000565119 IRF7Q92985 503 aa12.14□□□□□ -0.47
CHD9-214ENST00000565119 NPAS3Q8IXF0 933 aa12.13□□□□□ -0.47
CHD9-214ENST00000565119 H3BM21 787 aa12.12□□□□□ -0.47
CHD9-214ENST00000565119 ERBB4Q15303 1308 aa12.11□□□□□ -0.47
CHD9-214ENST00000565119 CAPN5O15484 640 aaPredicted RBP12.11□□□□□ -0.47
CHD9-214ENST00000565119 PTCRAQ6ISU1 281 aaPredicted RBP12.09□□□□□ -0.47
CHD9-214ENST00000565119 JUNDP17535 347 aa12.08□□□□□ -0.48
CHD9-214ENST00000565119 USP46P62068 366 aa12.08□□□□□ -0.48
CHD9-214ENST00000565119 EHBP1Q8NDI1 1231 aa12.08□□□□□ -0.48
CHD9-214ENST00000565119 HOXA2O43364 376 aa12.07□□□□□ -0.48
CHD9-214ENST00000565119 GUCA2AQ02747 115 aa12.07□□□□□ -0.48
CHD9-214ENST00000565119 SYMPKQ92797 1274 aaKnown RBP12.06□□□□□ -0.48
CHD9-214ENST00000565119 WASF2Q9Y6W5 498 aa12.06□□□□□ -0.48
CHD9-214ENST00000565119 GPIHBP1Q8IV16 184 aa12.04□□□□□ -0.48
CHD9-214ENST00000565119 ZFP42Q96MM3 310 aa12.03□□□□□ -0.48
CHD9-214ENST00000565119 NUDT12Q9BQG2 462 aa12.03□□□□□ -0.48
CHD9-214ENST00000565119 SH3BP2P78314 561 aa12.01□□□□□ -0.49
CHD9-214ENST00000565119 MDM2Q00987 491 aaPredicted RBP12.01□□□□□ -0.49
CHD9-214ENST00000565119 MAP2K5Q13163 448 aa11.98□□□□□ -0.49
CHD9-214ENST00000565119 RETREG3Q86VR2 466 aa11.97□□□□□ -0.49
CHD9-214ENST00000565119 TLL2Q9Y6L7 1015 aa11.96□□□□□ -0.49
CHD9-214ENST00000565119 SUZ12Q15022 739 aaKnown RBP11.95□□□□□ -0.5
CHD9-214ENST00000565119 IRF6O14896 467 aa11.94□□□□□ -0.5
CHD9-214ENST00000565119 SOBPA7XYQ1 873 aa11.93□□□□□ -0.5
CHD9-214ENST00000565119 MRPL14Q6P1L8 145 aaKnown RBP11.93□□□□□ -0.5
CHD9-214ENST00000565119 CCNYL3P0C7X3 344 aa11.92□□□□□ -0.5
CHD9-214ENST00000565119 VSIG8P0DPA2 414 aa11.92□□□□□ -0.5
CHD9-214ENST00000565119 PCDHGC3Q9UN70 934 aa11.92□□□□□ -0.5
CHD9-214ENST00000565119 MS4A1P11836 297 aa11.91□□□□□ -0.5
CHD9-214ENST00000565119 NNTQ13423 1086 aa11.91□□□□□ -0.5
CHD9-214ENST00000565119 LINC01559Q495D7 138 aa11.91□□□□□ -0.5
CHD9-214ENST00000565119 PURBQ96QR8 312 aaKnown RBP11.91□□□□□ -0.5
CHD9-214ENST00000565119 BAP1Q92560 729 aa11.9□□□□□ -0.5
CHD9-214ENST00000565119 UNC93B1Q9H1C4 597 aa11.9□□□□□ -0.5
CHD9-214ENST00000565119 FAM217BQ9NTX9 383 aaPredicted RBP11.89□□□□□ -0.51
CHD9-214ENST00000565119 TIMP2P16035 220 aa11.88□□□□□ -0.51
CHD9-214ENST00000565119 EVA1BQ9NVM1 165 aa11.88□□□□□ -0.51
CHD9-214ENST00000565119 C6orf229H3BNL8 230 aa11.87□□□□□ -0.51
CHD9-214ENST00000565119 FDX1P10109 184 aa11.87□□□□□ -0.51
CHD9-214ENST00000565119 GSK3AP49840 483 aa11.87□□□□□ -0.51
CHD9-214ENST00000565119 SCARF1Q14162 830 aa11.87□□□□□ -0.51
CHD9-214ENST00000565119 NUTM1Q86Y26 1132 aa11.87□□□□□ -0.51
CHD9-214ENST00000565119 PLEKHG3A1L390 1219 aa11.86□□□□□ -0.51
CHD9-214ENST00000565119 WDR4P57081 412 aaKnown RBP11.86□□□□□ -0.51
CHD9-214ENST00000565119 MPNDQ8N594 471 aa11.86□□□□□ -0.51
CHD9-214ENST00000565119 KLF16Q9BXK1 252 aaPredicted RBP11.86□□□□□ -0.51
CHD9-214ENST00000565119 VARSP26640 1264 aaKnown RBP11.85□□□□□ -0.51
CHD9-214ENST00000565119 PTPRNQ16849 979 aa11.85□□□□□ -0.51
CHD9-214ENST00000565119 KCTD17Q8N5Z5 321 aa11.85□□□□□ -0.51
CHD9-214ENST00000565119 ZNF511Q8NB15 262 aa11.85□□□□□ -0.51
CHD9-214ENST00000565119 GPCPD1Q9NPB8 672 aa11.85□□□□□ -0.51
CHD9-214ENST00000565119 MINK1Q8N4C8 1332 aaPredicted RBP11.85□□□□□ -0.51
CHD9-214ENST00000565119 ADH1CP00326 375 aa11.84□□□□□ -0.51
CHD9-214ENST00000565119 KCNMA1Q12791 1236 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms