RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 CLK2P49760 499 aaKnown RBP9.41□□□□□ -0.9
PALB2-203ENST00000565038 Q3C1V9 767 aa9.41□□□□□ -0.9
PALB2-203ENST00000565038 BRICD5Q6PL45 260 aa9.41□□□□□ -0.9
PALB2-203ENST00000565038 PROCA1Q8NCQ7 364 aaPredicted RBP9.41□□□□□ -0.9
PALB2-203ENST00000565038 C6orf229H3BNL8 230 aa9.4□□□□□ -0.9
PALB2-203ENST00000565038 SKIV2LQ15477 1246 aaKnown RBP9.4□□□□□ -0.9
PALB2-203ENST00000565038 SPSB2Q99619 263 aa9.4□□□□□ -0.9
PALB2-203ENST00000565038 CABLES1Q8TDN4 633 aa9.39□□□□□ -0.91
PALB2-203ENST00000565038 ADH1BP00325 375 aa9.38□□□□□ -0.91
PALB2-203ENST00000565038 GJA5P36382 358 aa9.38□□□□□ -0.91
PALB2-203ENST00000565038 SALL2Q9Y467 1007 aaPredicted RBP9.38□□□□□ -0.91
PALB2-203ENST00000565038 QPCTQ16769 361 aa9.37□□□□□ -0.91
PALB2-203ENST00000565038 HRCP23327 699 aa9.36□□□□□ -0.91
PALB2-203ENST00000565038 MTMR2Q13614 643 aa9.36□□□□□ -0.91
PALB2-203ENST00000565038 IFFO2Q5TF58 517 aa9.36□□□□□ -0.91
PALB2-203ENST00000565038 FAM160A2Q8N612 972 aaPredicted RBP9.36□□□□□ -0.91
PALB2-203ENST00000565038 USB1Q9BQ65 265 aaKnown RBP9.36□□□□□ -0.91
PALB2-203ENST00000565038 NUTM2BA6NNL0 878 aaPredicted RBP9.35□□□□□ -0.91
PALB2-203ENST00000565038 NUTM2EB1AL46 878 aaPredicted RBP9.35□□□□□ -0.91
PALB2-203ENST00000565038 S1PR4O95977 384 aa9.35□□□□□ -0.91
PALB2-203ENST00000565038 NUTM2DQ5VT03 806 aaPredicted RBP9.35□□□□□ -0.91
PALB2-203ENST00000565038 NUTM2AQ8IVF1 878 aaPredicted RBP9.35□□□□□ -0.91
PALB2-203ENST00000565038 PCMTD1Q96MG8 357 aaPredicted RBP9.35□□□□□ -0.91
PALB2-203ENST00000565038 SLC6A16Q9GZN6 736 aa9.35□□□□□ -0.91
PALB2-203ENST00000565038 ZBTB3Q9H5J0 574 aa9.35□□□□□ -0.91
PALB2-203ENST00000565038 PRDM9Q9NQV7 894 aa9.35□□□□□ -0.91
PALB2-203ENST00000565038 LILRB3O75022 631 aa9.34□□□□□ -0.91
PALB2-203ENST00000565038 TUSC1Q2TAM9 212 aa9.34□□□□□ -0.91
PALB2-203ENST00000565038 FBXO31Q5XUX0 539 aaPredicted RBP9.34□□□□□ -0.91
PALB2-203ENST00000565038 GOPCQ9HD26 462 aa9.34□□□□□ -0.91
PALB2-203ENST00000565038 RTL5Q5HYW3 569 aaPredicted RBP9.33□□□□□ -0.92
PALB2-203ENST00000565038 PRPF38BQ5VTL8 546 aaKnown RBP9.33□□□□□ -0.92
PALB2-203ENST00000565038 PPP1R18Q6NYC8 613 aa9.33□□□□□ -0.92
PALB2-203ENST00000565038 RETREG3Q86VR2 466 aa9.33□□□□□ -0.92
PALB2-203ENST00000565038 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.33□□□□□ -0.92
PALB2-203ENST00000565038 PPEF1O14829 653 aaPredicted RBP9.32□□□□□ -0.92
PALB2-203ENST00000565038 PRR7Q8TB68 274 aa9.32□□□□□ -0.92
PALB2-203ENST00000565038 CFAP99D6REC4 459 aa9.31□□□□□ -0.92
PALB2-203ENST00000565038 MSS51Q4VC12 460 aa9.31□□□□□ -0.92
PALB2-203ENST00000565038 A0A0G2JS52 829 aa9.3□□□□□ -0.92
PALB2-203ENST00000565038 SPDYE5A6NIY4 337 aa9.3□□□□□ -0.92
PALB2-203ENST00000565038 TSC1Q92574 1164 aa9.3□□□□□ -0.92
PALB2-203ENST00000565038 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.3□□□□□ -0.92
PALB2-203ENST00000565038 RNF223E7ERA6 249 aa9.29□□□□□ -0.92
PALB2-203ENST00000565038 GGCXP38435 758 aa9.29□□□□□ -0.92
PALB2-203ENST00000565038 JUNDP17535 347 aa9.28□□□□□ -0.92
PALB2-203ENST00000565038 TMEM132AQ24JP5 1023 aa9.28□□□□□ -0.92
PALB2-203ENST00000565038 DXOO77932 396 aaKnown RBP9.27□□□□□ -0.93
PALB2-203ENST00000565038 MMP16P51512 607 aa9.26□□□□□ -0.93
PALB2-203ENST00000565038 PPP2R2DQ66LE6 453 aa9.26□□□□□ -0.93
PALB2-203ENST00000565038 RFC5P40937 340 aa9.25□□□□□ -0.93
PALB2-203ENST00000565038 FCF1Q9Y324 198 aaKnown RBP9.25□□□□□ -0.93
PALB2-203ENST00000565038 CCDC24Q8N4L8 307 aa9.24□□□□□ -0.93
PALB2-203ENST00000565038 PER1O15534 1290 aaPredicted RBP9.23□□□□□ -0.93
PALB2-203ENST00000565038 AP1G2O75843 785 aa9.23□□□□□ -0.93
PALB2-203ENST00000565038 CTDSPL2Q05D32 466 aa9.23□□□□□ -0.93
PALB2-203ENST00000565038 ANKLE1Q8NAG6 615 aa9.23□□□□□ -0.93
PALB2-203ENST00000565038 PLA2G2CQ5R387 149 aa9.22□□□□□ -0.93
PALB2-203ENST00000565038 DESI1Q6ICB0 168 aa9.22□□□□□ -0.93
PALB2-203ENST00000565038 HELBQ8NG08 1087 aaPredicted RBP9.22□□□□□ -0.93
PALB2-203ENST00000565038 LYPD8Q6UX82 237 aa9.21□□□□□ -0.94
PALB2-203ENST00000565038 NUDT12Q9BQG2 462 aa9.21□□□□□ -0.94
PALB2-203ENST00000565038 PTPRNQ16849 979 aa9.2□□□□□ -0.94
PALB2-203ENST00000565038 CCNYL3P0C7X3 344 aa9.19□□□□□ -0.94
PALB2-203ENST00000565038 LRRN4Q8WUT4 740 aa9.19□□□□□ -0.94
PALB2-203ENST00000565038 EMID1Q96A84 441 aaPredicted RBP9.19□□□□□ -0.94
PALB2-203ENST00000565038 TMEM259Q4ZIN3 620 aa9.18□□□□□ -0.94
PALB2-203ENST00000565038 PTCRAQ6ISU1 281 aaPredicted RBP9.18□□□□□ -0.94
PALB2-203ENST00000565038 CTHP32929 405 aa9.17□□□□□ -0.94
PALB2-203ENST00000565038 LIAT1Q6ZQX7 453 aa9.17□□□□□ -0.94
PALB2-203ENST00000565038 PRKD2Q9BZL6 878 aa9.17□□□□□ -0.94
PALB2-203ENST00000565038 EVA1BQ9NVM1 165 aa9.17□□□□□ -0.94
PALB2-203ENST00000565038 MAP10Q9P2G4 905 aa9.17□□□□□ -0.94
PALB2-203ENST00000565038 USP17L8P0C7I0 530 aa9.16□□□□□ -0.94
PALB2-203ENST00000565038 SLC19A1P41440 591 aa9.16□□□□□ -0.94
PALB2-203ENST00000565038 KCNH2Q12809 1159 aa9.15□□□□□ -0.94
PALB2-203ENST00000565038 ZBTB24O43167 697 aaPredicted RBP9.14□□□□□ -0.95
PALB2-203ENST00000565038 F12P00748 615 aaPredicted RBP9.14□□□□□ -0.95
PALB2-203ENST00000565038 HMX1Q9NP08 348 aaPredicted RBP9.14□□□□□ -0.95
PALB2-203ENST00000565038 SNRKQ9NRH2 765 aa9.13□□□□□ -0.95
PALB2-203ENST00000565038 NR6A1Q15406 480 aa9.12□□□□□ -0.95
PALB2-203ENST00000565038 BANK1Q8NDB2 785 aa9.12□□□□□ -0.95
PALB2-203ENST00000565038 EPS8L1Q8TE68 723 aa9.12□□□□□ -0.95
PALB2-203ENST00000565038 UNC93B1Q9H1C4 597 aa9.12□□□□□ -0.95
PALB2-203ENST00000565038 RPIAP49247 311 aa9.11□□□□□ -0.95
PALB2-203ENST00000565038 TRIM32Q13049 653 aa9.11□□□□□ -0.95
PALB2-203ENST00000565038 V9GY48 417 aaPredicted RBP9.11□□□□□ -0.95
PALB2-203ENST00000565038 SPRYD7Q5W111 196 aa9.1□□□□□ -0.95
PALB2-203ENST00000565038 RGS20O76081 388 aa9.09□□□□□ -0.95
PALB2-203ENST00000565038 CD2BP2O95400 341 aaKnown RBP9.09□□□□□ -0.95
PALB2-203ENST00000565038 LINC01559Q495D7 138 aa9.09□□□□□ -0.95
PALB2-203ENST00000565038 MTMR14Q8NCE2 650 aa9.09□□□□□ -0.95
PALB2-203ENST00000565038 BAP1Q92560 729 aa9.09□□□□□ -0.95
PALB2-203ENST00000565038 ZNF697Q5TEC3 545 aa9.07□□□□□ -0.96
PALB2-203ENST00000565038 TRIM34Q9BYJ4 488 aa9.07□□□□□ -0.96
PALB2-203ENST00000565038 ZNF598Q86UK7 904 aaKnown RBP9.06□□□□□ -0.96
PALB2-203ENST00000565038 GJD4Q96KN9 370 aaPredicted RBP9.06□□□□□ -0.96
PALB2-203ENST00000565038 SH3BP2P78314 561 aa9.05□□□□□ -0.96
PALB2-203ENST00000565038 SKOR1P84550 965 aa9.05□□□□□ -0.96
PALB2-203ENST00000565038 FOXC1Q12948 553 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms