RNA–Protein interactions for RNA: ENST00000564848.1

C15orf39-205, Transcript of chromosome 15 open reading frame 39, humanhuman

APPRIS ALT2 TSL 2

Gene C15orf39, Length 353 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C15orf39-205ENST00000564848 PRAM1Q96QH2 718 aa32.52■■■□□ 2.8
C15orf39-205ENST00000564848 PLEKHH1Q9ULM0 1364 aa32.52■■■□□ 2.8
C15orf39-205ENST00000564848 NBPF1Q3BBV0 1214 aa32.51■■■□□ 2.79
C15orf39-205ENST00000564848 TIMELESSQ9UNS1 1208 aa32.5■■■□□ 2.79
C15orf39-205ENST00000564848 CDC42BPGQ6DT37 1551 aa32.49■■■□□ 2.79
C15orf39-205ENST00000564848 ROBO1Q9Y6N7 1651 aa32.47■■■□□ 2.79
C15orf39-205ENST00000564848 ARHGEF28Q8N1W1 1705 aaKnown RBP32.47■■■□□ 2.79
C15orf39-205ENST00000564848 ROCK2O75116 1388 aaKnown RBP32.46■■■□□ 2.79
C15orf39-205ENST00000564848 NBPF8Q3BBV2 869 aa32.45■■■□□ 2.79
C15orf39-205ENST00000564848 MST1RQ04912 1400 aa32.44■■■□□ 2.78
C15orf39-205ENST00000564848 SAFB2Q14151 953 aaKnown RBP eCLIP32.44■■■□□ 2.78
C15orf39-205ENST00000564848 RALGAPBQ86X10 1494 aa32.39■■■□□ 2.78
C15orf39-205ENST00000564848 HSPA1LP34931 641 aa32.38■■■□□ 2.77
C15orf39-205ENST00000564848 C1orf167Q5SNV9 1468 aa32.37■■■□□ 2.77
C15orf39-205ENST00000564848 ADGRB2O60241 1585 aa32.36■■■□□ 2.77
C15orf39-205ENST00000564848 GPRASP1Q5JY77 1395 aa32.35■■■□□ 2.77
C15orf39-205ENST00000564848 FMN2Q9NZ56 1722 aa32.35■■■□□ 2.77
C15orf39-205ENST00000564848 MINK1Q8N4C8 1332 aaPredicted RBP32.34■■■□□ 2.77
C15orf39-205ENST00000564848 BRINP3Q76B58 766 aa32.34■■■□□ 2.77
C15orf39-205ENST00000564848 EIF3AQ14152 1382 aaKnown RBP32.33■■■□□ 2.77
C15orf39-205ENST00000564848 CARD11Q9BXL7 1154 aa32.32■■■□□ 2.76
C15orf39-205ENST00000564848 CENPJQ9HC77 1338 aaPredicted RBP32.31■■■□□ 2.76
C15orf39-205ENST00000564848 HIRIP3Q9BW71 556 aaPredicted RBP32.3■■■□□ 2.76
C15orf39-205ENST00000564848 PHLPP1O60346 1717 aa32.29■■■□□ 2.76
C15orf39-205ENST00000564848 NUTM2FA1L443 756 aa32.28■■■□□ 2.76
C15orf39-205ENST00000564848 AHDC1Q5TGY3 1603 aaPredicted RBP32.27■■■□□ 2.76
C15orf39-205ENST00000564848 QRICH2Q9H0J4 1663 aa32.27■■■□□ 2.76
C15orf39-205ENST00000564848 WASLO00401 505 aaPredicted RBP32.25■■■□□ 2.75
C15orf39-205ENST00000564848 ESCO1Q5FWF5 840 aa32.25■■■□□ 2.75
C15orf39-205ENST00000564848 ORAI2Q96SN7 254 aa32.25■■■□□ 2.75
C15orf39-205ENST00000564848 ANKARQ7Z5J8 1434 aa32.24■■■□□ 2.75
C15orf39-205ENST00000564848 NHSL1Q5SYE7 1610 aa32.22■■■□□ 2.75
C15orf39-205ENST00000564848 TULP4Q9NRJ4 1543 aa32.21■■■□□ 2.75
C15orf39-205ENST00000564848 KIF1AQ12756 1690 aa32.19■■■□□ 2.74
C15orf39-205ENST00000564848 RGPD8O14715 1765 aaPredicted RBP32.19■■■□□ 2.74
C15orf39-205ENST00000564848 COL16A1Q07092 1604 aaPredicted RBP32.18■■■□□ 2.74
C15orf39-205ENST00000564848 USP32Q8NFA0 1604 aa32.15■■■□□ 2.74
C15orf39-205ENST00000564848 CDK19Q9BWU1 502 aa32.15■■■□□ 2.74
C15orf39-205ENST00000564848 NPHP3Q7Z494 1330 aa32.14■■■□□ 2.74
C15orf39-205ENST00000564848 PHF8Q9UPP1 1060 aa32.13■■■□□ 2.73
C15orf39-205ENST00000564848 ITSN1Q15811 1721 aa32.12■■■□□ 2.73
C15orf39-205ENST00000564848 EVC2Q86UK5 1308 aa32.11■■■□□ 2.73
C15orf39-205ENST00000564848 DDX17Q92841 729 aaKnown RBP32.11■■■□□ 2.73
C15orf39-205ENST00000564848 JCADQ9P266 1359 aa32.1■■■□□ 2.73
C15orf39-205ENST00000564848 SRPK2P78362 688 aaKnown RBP32.1■■■□□ 2.73
C15orf39-205ENST00000564848 SBNO2Q9Y2G9 1366 aa32.09■■■□□ 2.73
C15orf39-205ENST00000564848 PRR36Q9H6K5 1346 aa32.09■■■□□ 2.73
C15orf39-205ENST00000564848 FOXO3O43524 673 aa32.09■■■□□ 2.73
C15orf39-205ENST00000564848 NUDT16Q96DE0 195 aaKnown RBP32.09■■■□□ 2.73
C15orf39-205ENST00000564848 LRRC59Q96AG4 307 aaKnown RBP32.08■■■□□ 2.73
C15orf39-205ENST00000564848 ATP7BP35670 1465 aa32.08■■■□□ 2.73
C15orf39-205ENST00000564848 SOS2Q07890 1332 aaPredicted RBP32.07■■■□□ 2.72
C15orf39-205ENST00000564848 USP47Q96K76 1375 aa32.06■■■□□ 2.72
C15orf39-205ENST00000564848 PMFBP1Q8TBY8 1022 aa32.04■■■□□ 2.72
C15orf39-205ENST00000564848 SHPRHQ149N8 1683 aa32.03■■■□□ 2.72
C15orf39-205ENST00000564848 SLC24A1O60721 1099 aa32.03■■■□□ 2.72
C15orf39-205ENST00000564848 CCDC61Q9Y6R9 512 aa32.03■■■□□ 2.72
C15orf39-205ENST00000564848 TOPAZ1Q8N9V7 1692 aa32.02■■■□□ 2.72
C15orf39-205ENST00000564848 CABP2Q9NPB3 220 aa32.02■■■□□ 2.72
C15orf39-205ENST00000564848 PXDNQ92626 1479 aa32.02■■■□□ 2.72
C15orf39-205ENST00000564848 ST20-MTHFSA0A0A6YYL1 179 aa32.01■■■□□ 2.71
C15orf39-205ENST00000564848 PSME1Q06323 249 aa32■■■□□ 2.71
C15orf39-205ENST00000564848 XPCQ01831 940 aaPredicted RBP31.99■■■□□ 2.71
C15orf39-205ENST00000564848 KRT28Q7Z3Y7 464 aa31.99■■■□□ 2.71
C15orf39-205ENST00000564848 NGDNQ8NEJ9 315 aaKnown RBP31.99■■■□□ 2.71
C15orf39-205ENST00000564848 SPATA31A6Q5VVP1 1343 aa31.97■■■□□ 2.71
C15orf39-205ENST00000564848 PPIP5K1Q6PFW1 1433 aa31.95■■■□□ 2.71
C15orf39-205ENST00000564848 MED1Q15648 1581 aaPredicted RBP31.94■■■□□ 2.7
C15orf39-205ENST00000564848 ATAD2Q6PL18 1390 aa31.94■■■□□ 2.7
C15orf39-205ENST00000564848 PNPLA6Q8IY17 1366 aa31.94■■■□□ 2.7
C15orf39-205ENST00000564848 PLEKHG3A1L390 1219 aa31.93■■■□□ 2.7
C15orf39-205ENST00000564848 TESK2Q96S53 571 aa31.92■■■□□ 2.7
C15orf39-205ENST00000564848 SBNO1A3KN83 1393 aa31.91■■■□□ 2.7
C15orf39-205ENST00000564848 POLR3AO14802 1390 aaPredicted RBP31.9■■■□□ 2.7
C15orf39-205ENST00000564848 ACEP12821 1306 aa31.89■■■□□ 2.7
C15orf39-205ENST00000564848 SPATA31A3Q5VYP0 1347 aa31.89■■■□□ 2.7
C15orf39-205ENST00000564848 TNS3Q68CZ2 1445 aa31.88■■■□□ 2.69
C15orf39-205ENST00000564848 EIF4G2P78344 907 aaKnown RBP eCLIP31.87■■■□□ 2.69
C15orf39-205ENST00000564848 TMF1P82094 1093 aa31.87■■■□□ 2.69
C15orf39-205ENST00000564848 PUS7Q96PZ0 661 aaKnown RBP31.87■■■□□ 2.69
C15orf39-205ENST00000564848 CABP1Q9NZU7 370 aa31.87■■■□□ 2.69
C15orf39-205ENST00000564848 COL22A1Q8NFW1 1626 aaPredicted RBP31.86■■■□□ 2.69
C15orf39-205ENST00000564848 TRPM3Q9HCF6 1732 aaPredicted RBP31.85■■■□□ 2.69
C15orf39-205ENST00000564848 ARHGEF10O15013 1369 aa31.84■■■□□ 2.69
C15orf39-205ENST00000564848 NUTM2BA6NNL0 878 aaPredicted RBP31.83■■■□□ 2.69
C15orf39-205ENST00000564848 NUTM2EB1AL46 878 aaPredicted RBP31.83■■■□□ 2.69
C15orf39-205ENST00000564848 LMOD2Q6P5Q4 547 aa31.83■■■□□ 2.69
C15orf39-205ENST00000564848 NUTM2AQ8IVF1 878 aaPredicted RBP31.83■■■□□ 2.69
C15orf39-205ENST00000564848 PAK3O75914 559 aaPredicted RBP31.81■■■□□ 2.68
C15orf39-205ENST00000564848 CDCA8Q53HL2 280 aa31.81■■■□□ 2.68
C15orf39-205ENST00000564848 MEX3CQ5U5Q3 659 aaKnown RBP31.81■■■□□ 2.68
C15orf39-205ENST00000564848 PHF23Q9BUL5 403 aaPredicted RBP31.81■■■□□ 2.68
C15orf39-205ENST00000564848 DISP3Q9P2K9 1392 aa31.81■■■□□ 2.68
C15orf39-205ENST00000564848 LRP6O75581 1613 aa31.79■■■□□ 2.68
C15orf39-205ENST00000564848 BRD4O60885 1362 aaPredicted RBP31.79■■■□□ 2.68
C15orf39-205ENST00000564848 TMC1Q8TDI8 760 aa31.78■■■□□ 2.68
C15orf39-205ENST00000564848 ALS2Q96Q42 1657 aa31.77■■■□□ 2.68
C15orf39-205ENST00000564848 HSPA5P11021 654 aaKnown RBP31.77■■■□□ 2.68
C15orf39-205ENST00000564848 ZNF692Q9BU19 519 aaPredicted RBP31.77■■■□□ 2.68
C15orf39-205ENST00000564848 NINLQ9Y2I6 1382 aa31.75■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms