RNA–Protein interactions for RNA: ENST00000564770.1

CDH11-210, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-210ENST00000564770 TECPR2O15040 1411 aa23.91■■□□□ 1.42
CDH11-210ENST00000564770 MARF1Q9Y4F3 1742 aaKnown RBP23.9■■□□□ 1.42
CDH11-210ENST00000564770 C8orf37Q96NL8 207 aa23.9■■□□□ 1.42
CDH11-210ENST00000564770 FMN2Q9NZ56 1722 aa23.89■■□□□ 1.41
CDH11-210ENST00000564770 PXDNQ92626 1479 aa23.88■■□□□ 1.41
CDH11-210ENST00000564770 PIK3C2GO75747 1445 aa23.88■■□□□ 1.41
CDH11-210ENST00000564770 EP400Q96L91 3159 aa23.87■■□□□ 1.41
CDH11-210ENST00000564770 MYOM2P54296 1465 aa23.85■■□□□ 1.41
CDH11-210ENST00000564770 ADAMTS2O95450 1211 aa23.84■■□□□ 1.41
CDH11-210ENST00000564770 LRPPRCP42704 1394 aaKnown RBP23.83■■□□□ 1.41
CDH11-210ENST00000564770 ANKRD30BQ9BXX2 1392 aa23.83■■□□□ 1.41
CDH11-210ENST00000564770 PLEKHH1Q9ULM0 1364 aa23.83■■□□□ 1.41
CDH11-210ENST00000564770 RGL3Q3MIN7 710 aa23.83■■□□□ 1.41
CDH11-210ENST00000564770 MPHOSPH9Q99550 1183 aa23.83■■□□□ 1.41
CDH11-210ENST00000564770 RGPD8O14715 1765 aaPredicted RBP23.82■■□□□ 1.4
CDH11-210ENST00000564770 KIF1AQ12756 1690 aa23.81■■□□□ 1.4
CDH11-210ENST00000564770 QTRT2Q9H974 415 aaKnown RBP23.8■■□□□ 1.4
CDH11-210ENST00000564770 RBM6P78332 1123 aaKnown RBP23.79■■□□□ 1.4
CDH11-210ENST00000564770 WAPLQ7Z5K2 1190 aa23.79■■□□□ 1.4
CDH11-210ENST00000564770 STK26Q9P289 416 aa23.79■■□□□ 1.4
CDH11-210ENST00000564770 NRXN1Q9ULB1 1477 aa23.79■■□□□ 1.4
CDH11-210ENST00000564770 YTHDC2Q9H6S0 1430 aaKnown RBP23.78■■□□□ 1.4
CDH11-210ENST00000564770 NPHP3Q7Z494 1330 aa23.78■■□□□ 1.4
CDH11-210ENST00000564770 ABCC11Q96J66 1382 aa23.78■■□□□ 1.4
CDH11-210ENST00000564770 ESCO1Q5FWF5 840 aa23.77■■□□□ 1.4
CDH11-210ENST00000564770 TMEM132EQ6IEE7 984 aa23.77■■□□□ 1.4
CDH11-210ENST00000564770 NGLY1Q96IV0 654 aa23.77■■□□□ 1.4
CDH11-210ENST00000564770 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.76■■□□□ 1.39
CDH11-210ENST00000564770 ATRNO75882 1429 aa23.76■■□□□ 1.39
CDH11-210ENST00000564770 NUTM2FA1L443 756 aa23.75■■□□□ 1.39
CDH11-210ENST00000564770 XPCQ01831 940 aaPredicted RBP23.75■■□□□ 1.39
CDH11-210ENST00000564770 SRCAPQ6ZRS2 3230 aa23.74■■□□□ 1.39
CDH11-210ENST00000564770 ABCA3Q99758 1704 aa23.73■■□□□ 1.39
CDH11-210ENST00000564770 USP21Q9UK80 565 aa23.73■■□□□ 1.39
CDH11-210ENST00000564770 FOXO3O43524 673 aa23.72■■□□□ 1.39
CDH11-210ENST00000564770 FNBP4Q8N3X1 1017 aaPredicted RBP23.72■■□□□ 1.39
CDH11-210ENST00000564770 BCL9LQ86UU0 1499 aa23.72■■□□□ 1.39
CDH11-210ENST00000564770 USP32Q8NFA0 1604 aa23.71■■□□□ 1.39
CDH11-210ENST00000564770 TRPC5Q9UL62 973 aaPredicted RBP23.67■■□□□ 1.38
CDH11-210ENST00000564770 RAB3GAP2Q9H2M9 1393 aa23.66■■□□□ 1.38
CDH11-210ENST00000564770 ADGRB1O14514 1584 aa23.66■■□□□ 1.38
CDH11-210ENST00000564770 ADGRB2O60241 1585 aa23.66■■□□□ 1.38
CDH11-210ENST00000564770 GLI3P10071 1580 aa23.66■■□□□ 1.38
CDH11-210ENST00000564770 PLCH1Q4KWH8 1693 aa23.66■■□□□ 1.38
CDH11-210ENST00000564770 DLC1Q96QB1 1528 aa23.65■■□□□ 1.38
CDH11-210ENST00000564770 C14orf93Q9H972 538 aaKnown RBP23.65■■□□□ 1.38
CDH11-210ENST00000564770 ATAD2Q6PL18 1390 aa23.65■■□□□ 1.38
CDH11-210ENST00000564770 SLIT2O94813 1529 aa23.64■■□□□ 1.37
CDH11-210ENST00000564770 SPATA31A3Q5VYP0 1347 aa23.63■■□□□ 1.37
CDH11-210ENST00000564770 CFAP70Q5T0N1 1121 aa23.63■■□□□ 1.37
CDH11-210ENST00000564770 TNS3Q68CZ2 1445 aa23.62■■□□□ 1.37
CDH11-210ENST00000564770 BRWD3Q6RI45 1802 aa23.61■■□□□ 1.37
CDH11-210ENST00000564770 SIRT1Q96EB6 747 aa23.61■■□□□ 1.37
CDH11-210ENST00000564770 TRPM3Q9HCF6 1732 aaPredicted RBP23.61■■□□□ 1.37
CDH11-210ENST00000564770 DHX57Q6P158 1386 aaKnown RBP23.6■■□□□ 1.37
CDH11-210ENST00000564770 NWD2Q9ULI1 1742 aa23.59■■□□□ 1.37
CDH11-210ENST00000564770 RALGAPBQ86X10 1494 aa23.58■■□□□ 1.37
CDH11-210ENST00000564770 SAFB2Q14151 953 aaKnown RBP eCLIP23.57■■□□□ 1.36
CDH11-210ENST00000564770 PRAM1Q96QH2 718 aa23.57■■□□□ 1.36
CDH11-210ENST00000564770 ACIN1Q9UKV3 1341 aaKnown RBP23.57■■□□□ 1.36
CDH11-210ENST00000564770 KRT28Q7Z3Y7 464 aa23.56■■□□□ 1.36
CDH11-210ENST00000564770 PHF8Q9UPP1 1060 aa23.56■■□□□ 1.36
CDH11-210ENST00000564770 ALS2Q96Q42 1657 aa23.56■■□□□ 1.36
CDH11-210ENST00000564770 ARHGEF28Q8N1W1 1705 aaKnown RBP23.56■■□□□ 1.36
CDH11-210ENST00000564770 NRAPQ86VF7 1730 aa23.55■■□□□ 1.36
CDH11-210ENST00000564770 CRYBG1Q9Y4K1 1723 aa23.54■■□□□ 1.36
CDH11-210ENST00000564770 ANKARQ7Z5J8 1434 aa23.54■■□□□ 1.36
CDH11-210ENST00000564770 GJD4Q96KN9 370 aaPredicted RBP23.54■■□□□ 1.36
CDH11-210ENST00000564770 SBNO1A3KN83 1393 aa23.52■■□□□ 1.36
CDH11-210ENST00000564770 UNC5CLQ8IV45 518 aa23.51■■□□□ 1.35
CDH11-210ENST00000564770 CABLES1Q8TDN4 633 aa23.51■■□□□ 1.35
CDH11-210ENST00000564770 TULP4Q9NRJ4 1543 aa23.5■■□□□ 1.35
CDH11-210ENST00000564770 ITSN1Q15811 1721 aa23.48■■□□□ 1.35
CDH11-210ENST00000564770 PRR36Q9H6K5 1346 aa23.47■■□□□ 1.35
CDH11-210ENST00000564770 ARHGEF10O15013 1369 aa23.47■■□□□ 1.35
CDH11-210ENST00000564770 PLEKHG5O94827 1062 aa23.46■■□□□ 1.35
CDH11-210ENST00000564770 PMFBP1Q8TBY8 1022 aa23.46■■□□□ 1.35
CDH11-210ENST00000564770 HIRIP3Q9BW71 556 aaPredicted RBP23.46■■□□□ 1.35
CDH11-210ENST00000564770 POGKQ9P215 609 aa23.46■■□□□ 1.35
CDH11-210ENST00000564770 TRAK1Q9UPV9 953 aa23.46■■□□□ 1.35
CDH11-210ENST00000564770 PSME1Q06323 249 aa23.45■■□□□ 1.34
CDH11-210ENST00000564770 COL14A1Q05707 1796 aaKnown RBP23.44■■□□□ 1.34
CDH11-210ENST00000564770 HAP1P54257 671 aaPredicted RBP23.43■■□□□ 1.34
CDH11-210ENST00000564770 ATP7BP35670 1465 aa23.43■■□□□ 1.34
CDH11-210ENST00000564770 TOPAZ1Q8N9V7 1692 aa23.42■■□□□ 1.34
CDH11-210ENST00000564770 MINK1Q8N4C8 1332 aaPredicted RBP23.42■■□□□ 1.34
CDH11-210ENST00000564770 LMOD2Q6P5Q4 547 aa23.42■■□□□ 1.34
CDH11-210ENST00000564770 DCAF11Q8TEB1 546 aa23.41■■□□□ 1.34
CDH11-210ENST00000564770 KDM2AQ9Y2K7 1162 aa23.41■■□□□ 1.34
CDH11-210ENST00000564770 PHRF1Q9P1Y6 1649 aaKnown RBP23.41■■□□□ 1.34
CDH11-210ENST00000564770 VPS72Q15906 364 aa23.4■■□□□ 1.34
CDH11-210ENST00000564770 BLMP54132 1417 aaPredicted RBP23.4■■□□□ 1.34
CDH11-210ENST00000564770 EIF3AQ14152 1382 aaKnown RBP23.4■■□□□ 1.34
CDH11-210ENST00000564770 KIAA1210Q9ULL0 1709 aa23.39■■□□□ 1.33
CDH11-210ENST00000564770 CCDC125Q86Z20 511 aa23.37■■□□□ 1.33
CDH11-210ENST00000564770 WASLO00401 505 aaPredicted RBP23.36■■□□□ 1.33
CDH11-210ENST00000564770 FAM83GA6ND36 823 aa23.35■■□□□ 1.33
CDH11-210ENST00000564770 SEPT12Q8IYM1 358 aa23.35■■□□□ 1.33
CDH11-210ENST00000564770 THSD7AQ9UPZ6 1657 aa23.35■■□□□ 1.33
CDH11-210ENST00000564770 GPRASP1Q5JY77 1395 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms