RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 CGNL1Q0VF96 1302 aa20.01■□□□□ 0.79
GTF3C1-205ENST00000564747 TCP11L2Q8N4U5 519 aa20■□□□□ 0.79
GTF3C1-205ENST00000564747 NPATQ14207 1427 aa20■□□□□ 0.79
GTF3C1-205ENST00000564747 FRAT1Q92837 279 aaPredicted RBP20■□□□□ 0.79
GTF3C1-205ENST00000564747 RUNDC1Q96C34 613 aa20■□□□□ 0.79
GTF3C1-205ENST00000564747 SETBP1Q9Y6X0 1596 aa20■□□□□ 0.79
GTF3C1-205ENST00000564747 ZNF518AQ6AHZ1 1483 aa19.99■□□□□ 0.79
GTF3C1-205ENST00000564747 CLUAP1Q96AJ1 413 aa19.99■□□□□ 0.79
GTF3C1-205ENST00000564747 MTHFSP49914 203 aa19.99■□□□□ 0.79
GTF3C1-205ENST00000564747 NFKBIBQ15653 356 aa19.98■□□□□ 0.79
GTF3C1-205ENST00000564747 NUTM2DQ5VT03 806 aaPredicted RBP19.98■□□□□ 0.79
GTF3C1-205ENST00000564747 SHPRHQ149N8 1683 aa19.98■□□□□ 0.79
GTF3C1-205ENST00000564747 RARSP54136 660 aaKnown RBP19.96■□□□□ 0.79
GTF3C1-205ENST00000564747 IL27Q8NEV9 243 aa19.96■□□□□ 0.79
GTF3C1-205ENST00000564747 ADGRB1O14514 1584 aa19.96■□□□□ 0.79
GTF3C1-205ENST00000564747 QRICH2Q9H0J4 1663 aa19.96■□□□□ 0.79
GTF3C1-205ENST00000564747 PHF23Q9BUL5 403 aaPredicted RBP19.95■□□□□ 0.78
GTF3C1-205ENST00000564747 PPLO60437 1756 aa19.94■□□□□ 0.78
GTF3C1-205ENST00000564747 TNNQ9UQP3 1299 aa19.94■□□□□ 0.78
GTF3C1-205ENST00000564747 BCL2L13Q9BXK5 485 aa19.94■□□□□ 0.78
GTF3C1-205ENST00000564747 NINLQ9Y2I6 1382 aa19.93■□□□□ 0.78
GTF3C1-205ENST00000564747 ZC3H13Q5T200 1668 aaKnown RBP19.93■□□□□ 0.78
GTF3C1-205ENST00000564747 RLBP1P12271 317 aa19.92■□□□□ 0.78
GTF3C1-205ENST00000564747 WDR63Q8IWG1 891 aa19.92■□□□□ 0.78
GTF3C1-205ENST00000564747 IQSEC2Q5JU85 1478 aa19.92■□□□□ 0.78
GTF3C1-205ENST00000564747 FRMPD1Q5SYB0 1578 aa19.91■□□□□ 0.78
GTF3C1-205ENST00000564747 RPGRIP1LQ68CZ1 1315 aa19.91■□□□□ 0.78
GTF3C1-205ENST00000564747 USP19O94966 1318 aa19.91■□□□□ 0.78
GTF3C1-205ENST00000564747 SEC24BO95487 1268 aa19.91■□□□□ 0.78
GTF3C1-205ENST00000564747 CFAP53Q96M91 514 aa19.91■□□□□ 0.78
GTF3C1-205ENST00000564747 NPM1P06748 294 aaKnown RBP eCLIP19.9■□□□□ 0.78
GTF3C1-205ENST00000564747 PCDHB15Q9Y5E8 787 aa19.89■□□□□ 0.78
GTF3C1-205ENST00000564747 CD109Q6YHK3 1445 aa19.89■□□□□ 0.78
GTF3C1-205ENST00000564747 POGZQ7Z3K3 1410 aa19.89■□□□□ 0.78
GTF3C1-205ENST00000564747 SAFB2Q14151 953 aaKnown RBP eCLIP19.89■□□□□ 0.77
GTF3C1-205ENST00000564747 CABP2Q9NPB3 220 aa19.89■□□□□ 0.77
GTF3C1-205ENST00000564747 EVC2Q86UK5 1308 aa19.89■□□□□ 0.77
GTF3C1-205ENST00000564747 MAPK8IP3Q9UPT6 1336 aa19.89■□□□□ 0.77
GTF3C1-205ENST00000564747 SENP3Q9H4L4 574 aaPredicted RBP19.89■□□□□ 0.77
GTF3C1-205ENST00000564747 U2AF1L5P0DN76 240 aaPredicted RBP19.88■□□□□ 0.77
GTF3C1-205ENST00000564747 U2AF1Q01081 240 aaKnown RBP eCLIP19.88■□□□□ 0.77
GTF3C1-205ENST00000564747 GSE1Q14687 1217 aa19.88■□□□□ 0.77
GTF3C1-205ENST00000564747 CCDC27Q2M243 656 aa19.88■□□□□ 0.77
GTF3C1-205ENST00000564747 RTN4Q9NQC3 1192 aaKnown RBP19.88■□□□□ 0.77
GTF3C1-205ENST00000564747 MLH3Q9UHC1 1453 aa19.87■□□□□ 0.77
GTF3C1-205ENST00000564747 VGFO15240 615 aaPredicted RBP19.86■□□□□ 0.77
GTF3C1-205ENST00000564747 ABCC3O15438 1527 aa19.86■□□□□ 0.77
GTF3C1-205ENST00000564747 ANKRD36BQ8N2N9 1353 aa19.85■□□□□ 0.77
GTF3C1-205ENST00000564747 PMFBP1Q8TBY8 1022 aa19.85■□□□□ 0.77
GTF3C1-205ENST00000564747 ANO8Q9HCE9 1232 aaPredicted RBP19.85■□□□□ 0.77
GTF3C1-205ENST00000564747 USP32Q8NFA0 1604 aa19.85■□□□□ 0.77
GTF3C1-205ENST00000564747 FRAT2O75474 233 aaPredicted RBP19.85■□□□□ 0.77
GTF3C1-205ENST00000564747 GLI2P10070 1586 aa19.85■□□□□ 0.77
GTF3C1-205ENST00000564747 TULP4Q9NRJ4 1543 aa19.84■□□□□ 0.77
GTF3C1-205ENST00000564747 RAPGEF3O95398 923 aa19.84■□□□□ 0.77
GTF3C1-205ENST00000564747 HECW2Q9P2P5 1572 aa19.84■□□□□ 0.77
GTF3C1-205ENST00000564747 PUS7Q96PZ0 661 aaKnown RBP19.83■□□□□ 0.77
GTF3C1-205ENST00000564747 MYH16Q9H6N6 1097 aa19.83■□□□□ 0.77
GTF3C1-205ENST00000564747 STK26Q9P289 416 aa19.83■□□□□ 0.76
GTF3C1-205ENST00000564747 VIRMAQ69YN4 1812 aaKnown RBP19.82■□□□□ 0.76
GTF3C1-205ENST00000564747 SIGLEC1Q9BZZ2 1709 aa19.82■□□□□ 0.76
GTF3C1-205ENST00000564747 AAMPQ13685 434 aa19.82■□□□□ 0.76
GTF3C1-205ENST00000564747 PDZRN3Q9UPQ7 1066 aa19.82■□□□□ 0.76
GTF3C1-205ENST00000564747 IDI1Q13907 227 aa19.81■□□□□ 0.76
GTF3C1-205ENST00000564747 TSR2Q969E8 191 aaKnown RBP19.81■□□□□ 0.76
GTF3C1-205ENST00000564747 NSD2O96028 1365 aa19.8■□□□□ 0.76
GTF3C1-205ENST00000564747 ARHGEF28Q8N1W1 1705 aaKnown RBP19.8■□□□□ 0.76
GTF3C1-205ENST00000564747 GGNBP2Q9H3C7 697 aa19.8■□□□□ 0.76
GTF3C1-205ENST00000564747 U2SURPO15042 1029 aaKnown RBP19.79■□□□□ 0.76
GTF3C1-205ENST00000564747 NEXMIFQ5QGS0 1516 aa19.79■□□□□ 0.76
GTF3C1-205ENST00000564747 SRPK2P78362 688 aaKnown RBP19.78■□□□□ 0.76
GTF3C1-205ENST00000564747 CAMSAP1Q5T5Y3 1602 aa19.78■□□□□ 0.76
GTF3C1-205ENST00000564747 A0A1W2PP64 1363 aa19.78■□□□□ 0.76
GTF3C1-205ENST00000564747 RWDD1Q9H446 243 aaPredicted RBP19.78■□□□□ 0.76
GTF3C1-205ENST00000564747 MVPQ14764 893 aaKnown RBP19.78■□□□□ 0.76
GTF3C1-205ENST00000564747 NCBP3Q53F19 620 aaKnown RBP19.78■□□□□ 0.76
GTF3C1-205ENST00000564747 CFAP74Q9C0B2 1584 aa19.77■□□□□ 0.76
GTF3C1-205ENST00000564747 ZKSCAN2Q63HK3 967 aa19.77■□□□□ 0.75
GTF3C1-205ENST00000564747 PLEKHF1Q96S99 279 aa19.77■□□□□ 0.75
GTF3C1-205ENST00000564747 NLRP1Q9C000 1473 aa19.76■□□□□ 0.75
GTF3C1-205ENST00000564747 EXOSC9Q06265 439 aaKnown RBP19.76■□□□□ 0.75
GTF3C1-205ENST00000564747 PIK3C2BO00750 1634 aa19.76■□□□□ 0.75
GTF3C1-205ENST00000564747 FTSJ3Q8IY81 847 aaKnown RBP19.75■□□□□ 0.75
GTF3C1-205ENST00000564747 DZIP1LQ8IYY4 767 aaKnown RBP19.75■□□□□ 0.75
GTF3C1-205ENST00000564747 TMPOP42166 694 aaKnown RBP19.75■□□□□ 0.75
GTF3C1-205ENST00000564747 ABCC11Q96J66 1382 aa19.75■□□□□ 0.75
GTF3C1-205ENST00000564747 BRPF3Q9ULD4 1205 aa19.74■□□□□ 0.75
GTF3C1-205ENST00000564747 TRIM35Q9UPQ4 493 aa19.74■□□□□ 0.75
GTF3C1-205ENST00000564747 ADGRB2O60241 1585 aa19.74■□□□□ 0.75
GTF3C1-205ENST00000564747 BECN1Q14457 450 aa19.73■□□□□ 0.75
GTF3C1-205ENST00000564747 SMC4Q9NTJ3 1288 aa19.73■□□□□ 0.75
GTF3C1-205ENST00000564747 MINK1Q8N4C8 1332 aaPredicted RBP19.73■□□□□ 0.75
GTF3C1-205ENST00000564747 FYB1O15117 783 aa19.73■□□□□ 0.75
GTF3C1-205ENST00000564747 SLKQ9H2G2 1235 aaPredicted RBP19.72■□□□□ 0.75
GTF3C1-205ENST00000564747 SSH1Q8WYL5 1049 aa19.72■□□□□ 0.75
GTF3C1-205ENST00000564747 TRIM27P14373 513 aa19.71■□□□□ 0.75
GTF3C1-205ENST00000564747 TBC1D32Q96NH3 1257 aa19.71■□□□□ 0.75
GTF3C1-205ENST00000564747 UPF2Q9HAU5 1272 aaKnown RBP19.71■□□□□ 0.75
GTF3C1-205ENST00000564747 PRKCSHP14314 528 aaPredicted RBP19.71■□□□□ 0.75
GTF3C1-205ENST00000564747 PRAM1Q96QH2 718 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms