RNA–Protein interactions for RNA: ENST00000564726.5

RBBP6-208, Transcript of RB binding protein 6, ubiquitin ligase, human

TSL 3

Gene RBBP6, Length 514 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP6-208	ENST00000564726	LIAT1	Q6ZQX7	453 aa		11.39	□□□□□ -0.59
RBBP6-208	ENST00000564726	FCF1	Q9Y324	198 aa	Known RBP	11.39	□□□□□ -0.59
RBBP6-208	ENST00000564726	MOXD2P	A6NHM9	499 aa		11.38	□□□□□ -0.59
RBBP6-208	ENST00000564726	MSS51	Q4VC12	460 aa		11.38	□□□□□ -0.59
RBBP6-208	ENST00000564726	PCDHGC3	Q9UN70	934 aa		11.37	□□□□□ -0.59
RBBP6-208	ENST00000564726	GFRA3	O60609	400 aa		11.36	□□□□□ -0.59
RBBP6-208	ENST00000564726	TBC1D2	Q9BYX2	928 aa		11.36	□□□□□ -0.59
RBBP6-208	ENST00000564726	C6orf229	H3BNL8	230 aa		11.35	□□□□□ -0.59
RBBP6-208	ENST00000564726	SPRYD7	Q5W111	196 aa		11.35	□□□□□ -0.59
RBBP6-208	ENST00000564726	MMP16	P51512	607 aa		11.32	□□□□□ -0.6
RBBP6-208	ENST00000564726	PDZRN3	Q9UPQ7	1066 aa		11.32	□□□□□ -0.6
RBBP6-208	ENST00000564726	DIXDC1	Q155Q3	683 aa		11.31	□□□□□ -0.6
RBBP6-208	ENST00000564726	ZNF697	Q5TEC3	545 aa		11.31	□□□□□ -0.6
RBBP6-208	ENST00000564726	ZNF598	Q86UK7	904 aa	Known RBP	11.31	□□□□□ -0.6
RBBP6-208	ENST00000564726	DXO	O77932	396 aa	Known RBP	11.3	□□□□□ -0.6
RBBP6-208	ENST00000564726		Q6ZNB5	142 aa		11.3	□□□□□ -0.6
RBBP6-208	ENST00000564726	RETREG3	Q86VR2	466 aa		11.3	□□□□□ -0.6
RBBP6-208	ENST00000564726	CCDC24	Q8N4L8	307 aa		11.3	□□□□□ -0.6
RBBP6-208	ENST00000564726	ZBTB24	O43167	697 aa	Predicted RBP	11.29	□□□□□ -0.6
RBBP6-208	ENST00000564726	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.29	□□□□□ -0.6
RBBP6-208	ENST00000564726	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.29	□□□□□ -0.6
RBBP6-208	ENST00000564726	LAPTM4A	Q15012	233 aa		11.28	□□□□□ -0.6
RBBP6-208	ENST00000564726	CSPP1	Q1MSJ5	1256 aa		11.28	□□□□□ -0.6
RBBP6-208	ENST00000564726	PCDHB15	Q9Y5E8	787 aa		11.28	□□□□□ -0.6
RBBP6-208	ENST00000564726	JUND	P17535	347 aa		11.27	□□□□□ -0.61
RBBP6-208	ENST00000564726	MTMR2	Q13614	643 aa		11.27	□□□□□ -0.61
RBBP6-208	ENST00000564726	RIC3	Q7Z5B4	369 aa		11.27	□□□□□ -0.61
RBBP6-208	ENST00000564726	NRG2	O14511	850 aa	Predicted RBP	11.26	□□□□□ -0.61
RBBP6-208	ENST00000564726	CD2BP2	O95400	341 aa	Known RBP	11.26	□□□□□ -0.61
RBBP6-208	ENST00000564726	RPIA	P49247	311 aa		11.26	□□□□□ -0.61
RBBP6-208	ENST00000564726	TRIM67	Q6ZTA4	783 aa		11.26	□□□□□ -0.61
RBBP6-208	ENST00000564726	TNFRSF10A	O00220	468 aa		11.25	□□□□□ -0.61
RBBP6-208	ENST00000564726	SPTLC1	O15269	473 aa		11.25	□□□□□ -0.61
RBBP6-208	ENST00000564726	FOXC1	Q12948	553 aa		11.25	□□□□□ -0.61
RBBP6-208	ENST00000564726	MYSM1	Q5VVJ2	828 aa		11.25	□□□□□ -0.61
RBBP6-208	ENST00000564726	PRR7	Q8TB68	274 aa		11.25	□□□□□ -0.61
RBBP6-208	ENST00000564726	KDM4C	Q9H3R0	1056 aa		11.25	□□□□□ -0.61
RBBP6-208	ENST00000564726	GJA5	P36382	358 aa		11.23	□□□□□ -0.61
RBBP6-208	ENST00000564726	LIMD1	Q9UGP4	676 aa		11.23	□□□□□ -0.61
RBBP6-208	ENST00000564726	CABLES1	Q8TDN4	633 aa		11.22	□□□□□ -0.61
RBBP6-208	ENST00000564726	NUDT12	Q9BQG2	462 aa		11.22	□□□□□ -0.61
RBBP6-208	ENST00000564726	SPDYE5	A6NIY4	337 aa		11.21	□□□□□ -0.61
RBBP6-208	ENST00000564726	GDF9	O60383	454 aa		11.21	□□□□□ -0.61
RBBP6-208	ENST00000564726	HRC	P23327	699 aa		11.21	□□□□□ -0.61
RBBP6-208	ENST00000564726	ZBTB3	Q9H5J0	574 aa		11.21	□□□□□ -0.61
RBBP6-208	ENST00000564726	POLR3E	Q9NVU0	708 aa		11.21	□□□□□ -0.61
RBBP6-208	ENST00000564726	TRIM32	Q13049	653 aa		11.2	□□□□□ -0.62
RBBP6-208	ENST00000564726	TPRN	Q4KMQ1	711 aa		11.2	□□□□□ -0.62
RBBP6-208	ENST00000564726	FAM117A	Q9C073	453 aa		11.2	□□□□□ -0.62
RBBP6-208	ENST00000564726	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.19	□□□□□ -0.62
RBBP6-208	ENST00000564726	NUTM2E	B1AL46	878 aa	Predicted RBP	11.19	□□□□□ -0.62
RBBP6-208	ENST00000564726	NUTM2D	Q5VT03	806 aa	Predicted RBP	11.19	□□□□□ -0.62
RBBP6-208	ENST00000564726	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.19	□□□□□ -0.62
RBBP6-208	ENST00000564726	PKD2L1	Q9P0L9	805 aa		11.19	□□□□□ -0.62
RBBP6-208	ENST00000564726	CFAP99	D6REC4	459 aa		11.18	□□□□□ -0.62
RBBP6-208	ENST00000564726	PRR20E	P86478	221 aa		11.18	□□□□□ -0.62
RBBP6-208	ENST00000564726	PRR20C	P86479	221 aa		11.18	□□□□□ -0.62
RBBP6-208	ENST00000564726	PRR20D	P86480	221 aa		11.18	□□□□□ -0.62
RBBP6-208	ENST00000564726	PRR20B	P86481	221 aa		11.18	□□□□□ -0.62
RBBP6-208	ENST00000564726	PRR20A	P86496	221 aa		11.18	□□□□□ -0.62
RBBP6-208	ENST00000564726	QPCT	Q16769	361 aa		11.18	□□□□□ -0.62
RBBP6-208	ENST00000564726	TSC1	Q92574	1164 aa		11.18	□□□□□ -0.62
RBBP6-208	ENST00000564726	RSPH6A	Q9H0K4	717 aa		11.18	□□□□□ -0.62
RBBP6-208	ENST00000564726	CCNYL3	P0C7X3	344 aa		11.17	□□□□□ -0.62
RBBP6-208	ENST00000564726	CLK2	P49760	499 aa	Known RBP	11.17	□□□□□ -0.62
RBBP6-208	ENST00000564726	PTCRA	Q6ISU1	281 aa	Predicted RBP	11.17	□□□□□ -0.62
RBBP6-208	ENST00000564726	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.17	□□□□□ -0.62
RBBP6-208	ENST00000564726	PRPF38B	Q5VTL8	546 aa	Known RBP	11.16	□□□□□ -0.62
RBBP6-208	ENST00000564726	NEUROD2	Q15784	382 aa		11.15	□□□□□ -0.62
RBBP6-208	ENST00000564726	PTPRN	Q16849	979 aa		11.15	□□□□□ -0.62
RBBP6-208	ENST00000564726	TRAF7	Q6Q0C0	670 aa		11.15	□□□□□ -0.62
RBBP6-208	ENST00000564726	DDRGK1	Q96HY6	314 aa		11.15	□□□□□ -0.62
RBBP6-208	ENST00000564726	PKDCC	Q504Y2	493 aa		11.14	□□□□□ -0.63
RBBP6-208	ENST00000564726	DESI1	Q6ICB0	168 aa		11.14	□□□□□ -0.63
RBBP6-208	ENST00000564726	FAM187A	A6NFU0	413 aa		11.13	□□□□□ -0.63
RBBP6-208	ENST00000564726	LCE2B	O14633	110 aa		11.13	□□□□□ -0.63
RBBP6-208	ENST00000564726	LILRB3	O75022	631 aa		11.12	□□□□□ -0.63
RBBP6-208	ENST00000564726	EVA1B	Q9NVM1	165 aa		11.12	□□□□□ -0.63
RBBP6-208	ENST00000564726	PLEKHG3	A1L390	1219 aa		11.11	□□□□□ -0.63
RBBP6-208	ENST00000564726	CTH	P32929	405 aa		11.11	□□□□□ -0.63
RBBP6-208	ENST00000564726	SKOR1	P84550	965 aa		11.11	□□□□□ -0.63
RBBP6-208	ENST00000564726	TUSC1	Q2TAM9	212 aa		11.11	□□□□□ -0.63
RBBP6-208	ENST00000564726	RTL5	Q5HYW3	569 aa	Predicted RBP	11.11	□□□□□ -0.63
RBBP6-208	ENST00000564726	CYP4X1	Q8N118	509 aa		11.11	□□□□□ -0.63
RBBP6-208	ENST00000564726	WNT7A	O00755	349 aa		11.1	□□□□□ -0.63
RBBP6-208	ENST00000564726	KCNH2	Q12809	1159 aa		11.1	□□□□□ -0.63
RBBP6-208	ENST00000564726	LYPD8	Q6UX82	237 aa		11.1	□□□□□ -0.63
RBBP6-208	ENST00000564726	UNC93B1	Q9H1C4	597 aa		11.1	□□□□□ -0.63
RBBP6-208	ENST00000564726	TTC24	A2A3L6	582 aa	Predicted RBP	11.09	□□□□□ -0.63
RBBP6-208	ENST00000564726	PER1	O15534	1290 aa	Predicted RBP	11.09	□□□□□ -0.63
RBBP6-208	ENST00000564726	SKIV2L	Q15477	1246 aa	Known RBP	11.09	□□□□□ -0.63
RBBP6-208	ENST00000564726	RC3H1	Q5TC82	1133 aa	Known RBP	11.09	□□□□□ -0.63
RBBP6-208	ENST00000564726	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.09	□□□□□ -0.63
RBBP6-208	ENST00000564726	MRGPRX2	Q96LB1	330 aa		11.09	□□□□□ -0.63
RBBP6-208	ENST00000564726	DGAT1	O75907	488 aa		11.08	□□□□□ -0.64
RBBP6-208	ENST00000564726	LINC01559	Q495D7	138 aa		11.08	□□□□□ -0.64
RBBP6-208	ENST00000564726	SH3D19	Q5HYK7	790 aa		11.08	□□□□□ -0.64
RBBP6-208	ENST00000564726	TOR4A	Q9NXH8	423 aa		11.08	□□□□□ -0.64
RBBP6-208	ENST00000564726	WNT7B	P56706	349 aa		11.07	□□□□□ -0.64
RBBP6-208	ENST00000564726	IL27	Q8NEV9	243 aa		11.06	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms