RNA–Protein interactions for RNA: ENST00000564662.1

COTL1-204, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 2

Gene COTL1, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-204ENST00000564662 COL22A1Q8NFW1 1626 aaPredicted RBP29.92■■■□□ 2.38
COTL1-204ENST00000564662 TECPR2O15040 1411 aa29.91■■■□□ 2.38
COTL1-204ENST00000564662 PIK3C2GO75747 1445 aa29.91■■■□□ 2.38
COTL1-204ENST00000564662 SOS2Q07890 1332 aaPredicted RBP29.9■■■□□ 2.38
COTL1-204ENST00000564662 FMN2Q9NZ56 1722 aa29.89■■■□□ 2.38
COTL1-204ENST00000564662 STK26Q9P289 416 aa29.88■■■□□ 2.37
COTL1-204ENST00000564662 LRPPRCP42704 1394 aaKnown RBP29.87■■■□□ 2.37
COTL1-204ENST00000564662 MARF1Q9Y4F3 1742 aaKnown RBP29.86■■■□□ 2.37
COTL1-204ENST00000564662 ADAMTS2O95450 1211 aa29.86■■■□□ 2.37
COTL1-204ENST00000564662 RGS12O14924 1447 aa29.84■■■□□ 2.37
COTL1-204ENST00000564662 PXDNQ92626 1479 aa29.83■■■□□ 2.37
COTL1-204ENST00000564662 PLEKHH1Q9ULM0 1364 aa29.82■■■□□ 2.36
COTL1-204ENST00000564662 ESCO1Q5FWF5 840 aa29.82■■■□□ 2.36
COTL1-204ENST00000564662 TMEM132EQ6IEE7 984 aa29.82■■■□□ 2.36
COTL1-204ENST00000564662 WAPLQ7Z5K2 1190 aa29.82■■■□□ 2.36
COTL1-204ENST00000564662 UPF1Q92900 1129 aaKnown RBP eCLIP29.82■■■□□ 2.36
COTL1-204ENST00000564662 KIF1AQ12756 1690 aa29.82■■■□□ 2.36
COTL1-204ENST00000564662 YTHDC2Q9H6S0 1430 aaKnown RBP29.81■■■□□ 2.36
COTL1-204ENST00000564662 NGLY1Q96IV0 654 aa29.81■■■□□ 2.36
COTL1-204ENST00000564662 ABCC11Q96J66 1382 aa29.8■■■□□ 2.36
COTL1-204ENST00000564662 NPHP3Q7Z494 1330 aa29.8■■■□□ 2.36
COTL1-204ENST00000564662 RGPD8O14715 1765 aaPredicted RBP29.8■■■□□ 2.36
COTL1-204ENST00000564662 NUTM2FA1L443 756 aa29.79■■■□□ 2.36
COTL1-204ENST00000564662 QTRT2Q9H974 415 aaKnown RBP29.79■■■□□ 2.36
COTL1-204ENST00000564662 MYOM2P54296 1465 aa29.79■■■□□ 2.36
COTL1-204ENST00000564662 NRXN1Q9ULB1 1477 aa29.77■■■□□ 2.36
COTL1-204ENST00000564662 RBM6P78332 1123 aaKnown RBP29.76■■■□□ 2.35
COTL1-204ENST00000564662 XPCQ01831 940 aaPredicted RBP29.76■■■□□ 2.35
COTL1-204ENST00000564662 RAB3GAP2Q9H2M9 1393 aa29.75■■■□□ 2.35
COTL1-204ENST00000564662 ACIN1Q9UKV3 1341 aaKnown RBP29.74■■■□□ 2.35
COTL1-204ENST00000564662 FOXO3O43524 673 aa29.73■■■□□ 2.35
COTL1-204ENST00000564662 USP21Q9UK80 565 aa29.72■■■□□ 2.35
COTL1-204ENST00000564662 C14orf93Q9H972 538 aaKnown RBP29.67■■■□□ 2.34
COTL1-204ENST00000564662 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.67■■■□□ 2.34
COTL1-204ENST00000564662 DHX57Q6P158 1386 aaKnown RBP29.66■■■□□ 2.34
COTL1-204ENST00000564662 CFAP70Q5T0N1 1121 aa29.66■■■□□ 2.34
COTL1-204ENST00000564662 ATRNO75882 1429 aa29.65■■■□□ 2.34
COTL1-204ENST00000564662 TRPC5Q9UL62 973 aaPredicted RBP29.65■■■□□ 2.34
COTL1-204ENST00000564662 FNBP4Q8N3X1 1017 aaPredicted RBP29.64■■■□□ 2.34
COTL1-204ENST00000564662 USP32Q8NFA0 1604 aa29.63■■■□□ 2.33
COTL1-204ENST00000564662 ABCA3Q99758 1704 aa29.63■■■□□ 2.33
COTL1-204ENST00000564662 DLC1Q96QB1 1528 aa29.63■■■□□ 2.33
COTL1-204ENST00000564662 ADGRB2O60241 1585 aa29.61■■■□□ 2.33
COTL1-204ENST00000564662 SAFB2Q14151 953 aaKnown RBP eCLIP29.61■■■□□ 2.33
COTL1-204ENST00000564662 ADGRB1O14514 1584 aa29.6■■■□□ 2.33
COTL1-204ENST00000564662 SIRT1Q96EB6 747 aa29.6■■■□□ 2.33
COTL1-204ENST00000564662 BCL9LQ86UU0 1499 aa29.6■■■□□ 2.33
COTL1-204ENST00000564662 SPATA31A3Q5VYP0 1347 aa29.58■■■□□ 2.33
COTL1-204ENST00000564662 PRAM1Q96QH2 718 aa29.58■■■□□ 2.33
COTL1-204ENST00000564662 TNS3Q68CZ2 1445 aa29.57■■■□□ 2.32
COTL1-204ENST00000564662 ATAD2Q6PL18 1390 aa29.57■■■□□ 2.32
COTL1-204ENST00000564662 PLCH1Q4KWH8 1693 aa29.56■■■□□ 2.32
COTL1-204ENST00000564662 KRT28Q7Z3Y7 464 aa29.55■■■□□ 2.32
COTL1-204ENST00000564662 PHF8Q9UPP1 1060 aa29.55■■■□□ 2.32
COTL1-204ENST00000564662 POGKQ9P215 609 aa29.52■■■□□ 2.32
COTL1-204ENST00000564662 GLI3P10071 1580 aa29.52■■■□□ 2.32
COTL1-204ENST00000564662 SLIT2O94813 1529 aa29.51■■■□□ 2.32
COTL1-204ENST00000564662 ANKARQ7Z5J8 1434 aa29.51■■■□□ 2.31
COTL1-204ENST00000564662 ARHGEF28Q8N1W1 1705 aaKnown RBP29.5■■■□□ 2.31
COTL1-204ENST00000564662 TRPM3Q9HCF6 1732 aaPredicted RBP29.5■■■□□ 2.31
COTL1-204ENST00000564662 NWD2Q9ULI1 1742 aa29.48■■■□□ 2.31
COTL1-204ENST00000564662 PLEKHG5O94827 1062 aa29.48■■■□□ 2.31
COTL1-204ENST00000564662 KDM2AQ9Y2K7 1162 aa29.48■■■□□ 2.31
COTL1-204ENST00000564662 HAP1P54257 671 aaPredicted RBP29.47■■■□□ 2.31
COTL1-204ENST00000564662 TRAK1Q9UPV9 953 aa29.47■■■□□ 2.31
COTL1-204ENST00000564662 BRWD3Q6RI45 1802 aa29.46■■■□□ 2.31
COTL1-204ENST00000564662 PSME1Q06323 249 aa29.46■■■□□ 2.31
COTL1-204ENST00000564662 DCAF11Q8TEB1 546 aa29.46■■■□□ 2.31
COTL1-204ENST00000564662 GJD4Q96KN9 370 aaPredicted RBP29.46■■■□□ 2.31
COTL1-204ENST00000564662 SBNO1A3KN83 1393 aa29.46■■■□□ 2.31
COTL1-204ENST00000564662 RALGAPBQ86X10 1494 aa29.46■■■□□ 2.31
COTL1-204ENST00000564662 TULP4Q9NRJ4 1543 aa29.45■■■□□ 2.31
COTL1-204ENST00000564662 ALS2Q96Q42 1657 aa29.44■■■□□ 2.3
COTL1-204ENST00000564662 LMOD2Q6P5Q4 547 aa29.44■■■□□ 2.3
COTL1-204ENST00000564662 PMFBP1Q8TBY8 1022 aa29.44■■■□□ 2.3
COTL1-204ENST00000564662 CABLES1Q8TDN4 633 aa29.44■■■□□ 2.3
COTL1-204ENST00000564662 HIRIP3Q9BW71 556 aaPredicted RBP29.44■■■□□ 2.3
COTL1-204ENST00000564662 ITSN1Q15811 1721 aa29.44■■■□□ 2.3
COTL1-204ENST00000564662 ARHGEF10O15013 1369 aa29.43■■■□□ 2.3
COTL1-204ENST00000564662 UNC5CLQ8IV45 518 aa29.43■■■□□ 2.3
COTL1-204ENST00000564662 MINK1Q8N4C8 1332 aaPredicted RBP29.43■■■□□ 2.3
COTL1-204ENST00000564662 EIF3AQ14152 1382 aaKnown RBP29.4■■■□□ 2.3
COTL1-204ENST00000564662 NRAPQ86VF7 1730 aa29.39■■■□□ 2.3
COTL1-204ENST00000564662 EP400Q96L91 3159 aa29.38■■■□□ 2.29
COTL1-204ENST00000564662 CRYBG1Q9Y4K1 1723 aa29.38■■■□□ 2.29
COTL1-204ENST00000564662 PRR36Q9H6K5 1346 aa29.37■■■□□ 2.29
COTL1-204ENST00000564662 KIAA1210Q9ULL0 1709 aa29.34■■■□□ 2.29
COTL1-204ENST00000564662 GPRASP1Q5JY77 1395 aa29.33■■■□□ 2.29
COTL1-204ENST00000564662 COL14A1Q05707 1796 aaKnown RBP29.33■■■□□ 2.29
COTL1-204ENST00000564662 HRCP23327 699 aa29.32■■■□□ 2.28
COTL1-204ENST00000564662 STAC3Q96MF2 364 aa29.32■■■□□ 2.28
COTL1-204ENST00000564662 ATP7BP35670 1465 aa29.31■■■□□ 2.28
COTL1-204ENST00000564662 WASLO00401 505 aaPredicted RBP29.31■■■□□ 2.28
COTL1-204ENST00000564662 TOPAZ1Q8N9V7 1692 aa29.31■■■□□ 2.28
COTL1-204ENST00000564662 CCDC9Q9Y3X0 531 aaKnown RBP29.3■■■□□ 2.28
COTL1-204ENST00000564662 VPS72Q15906 364 aa29.29■■■□□ 2.28
COTL1-204ENST00000564662 PHRF1Q9P1Y6 1649 aaKnown RBP29.27■■■□□ 2.28
COTL1-204ENST00000564662 CCDC125Q86Z20 511 aa29.25■■■□□ 2.27
COTL1-204ENST00000564662 NGDNQ8NEJ9 315 aaKnown RBP29.25■■■□□ 2.27
COTL1-204ENST00000564662 FAM83GA6ND36 823 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 256.3 ms