RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 AFF2P51816 1311 aa35.48■■■■□ 3.27
NME3-206ENST00000564252 KNDC1Q76NI1 1749 aa35.47■■■■□ 3.27
NME3-206ENST00000564252 STK26Q9P289 416 aa35.46■■■■□ 3.27
NME3-206ENST00000564252 ABCC11Q96J66 1382 aa35.45■■■■□ 3.27
NME3-206ENST00000564252 TMEM132EQ6IEE7 984 aa35.44■■■■□ 3.26
NME3-206ENST00000564252 WAPLQ7Z5K2 1190 aa35.43■■■■□ 3.26
NME3-206ENST00000564252 RAB3GAP2Q9H2M9 1393 aa35.42■■■■□ 3.26
NME3-206ENST00000564252 RXRBP28702 533 aa35.41■■■■□ 3.26
NME3-206ENST00000564252 C8orf37Q96NL8 207 aa35.4■■■■□ 3.26
NME3-206ENST00000564252 NRXN1Q9ULB1 1477 aa35.4■■■■□ 3.26
NME3-206ENST00000564252 YTHDC2Q9H6S0 1430 aaKnown RBP35.4■■■■□ 3.26
NME3-206ENST00000564252 PLEKHH1Q9ULM0 1364 aa35.39■■■■□ 3.26
NME3-206ENST00000564252 CDK12Q9NYV4 1490 aaPredicted RBP35.38■■■■□ 3.25
NME3-206ENST00000564252 ESCO1Q5FWF5 840 aa35.38■■■■□ 3.25
NME3-206ENST00000564252 MYOM2P54296 1465 aa35.37■■■■□ 3.25
NME3-206ENST00000564252 COL22A1Q8NFW1 1626 aaPredicted RBP35.35■■■■□ 3.25
NME3-206ENST00000564252 NPHP3Q7Z494 1330 aa35.34■■■■□ 3.25
NME3-206ENST00000564252 C14orf93Q9H972 538 aaKnown RBP35.34■■■■□ 3.25
NME3-206ENST00000564252 PXDNQ92626 1479 aa35.34■■■■□ 3.25
NME3-206ENST00000564252 ADAMTS2O95450 1211 aa35.33■■■■□ 3.25
NME3-206ENST00000564252 FMN2Q9NZ56 1722 aa35.32■■■■□ 3.24
NME3-206ENST00000564252 NUTM2FA1L443 756 aa35.3■■■■□ 3.24
NME3-206ENST00000564252 SIRT1Q96EB6 747 aa35.29■■■■□ 3.24
NME3-206ENST00000564252 NGLY1Q96IV0 654 aa35.29■■■■□ 3.24
NME3-206ENST00000564252 QTRT2Q9H974 415 aaKnown RBP35.29■■■■□ 3.24
NME3-206ENST00000564252 FOXO3O43524 673 aa35.28■■■■□ 3.24
NME3-206ENST00000564252 CFAP70Q5T0N1 1121 aa35.28■■■■□ 3.24
NME3-206ENST00000564252 UPF1Q92900 1129 aaKnown RBP eCLIP35.27■■■■□ 3.24
NME3-206ENST00000564252 RBM6P78332 1123 aaKnown RBP35.25■■■■□ 3.23
NME3-206ENST00000564252 DHX57Q6P158 1386 aaKnown RBP35.25■■■■□ 3.23
NME3-206ENST00000564252 XPCQ01831 940 aaPredicted RBP35.24■■■■□ 3.23
NME3-206ENST00000564252 RGS12O14924 1447 aa35.23■■■■□ 3.23
NME3-206ENST00000564252 KIF1AQ12756 1690 aa35.21■■■■□ 3.23
NME3-206ENST00000564252 FNBP4Q8N3X1 1017 aaPredicted RBP35.19■■■■□ 3.22
NME3-206ENST00000564252 USP21Q9UK80 565 aa35.18■■■■□ 3.22
NME3-206ENST00000564252 DLC1Q96QB1 1528 aa35.16■■■■□ 3.22
NME3-206ENST00000564252 MARF1Q9Y4F3 1742 aaKnown RBP35.15■■■■□ 3.22
NME3-206ENST00000564252 PRAM1Q96QH2 718 aa35.15■■■■□ 3.22
NME3-206ENST00000564252 ADGRB1O14514 1584 aa35.15■■■■□ 3.22
NME3-206ENST00000564252 RGPD8O14715 1765 aaPredicted RBP35.15■■■■□ 3.22
NME3-206ENST00000564252 HRCP23327 699 aa35.13■■■■□ 3.21
NME3-206ENST00000564252 TRPC5Q9UL62 973 aaPredicted RBP35.12■■■■□ 3.21
NME3-206ENST00000564252 SPATA31A3Q5VYP0 1347 aa35.11■■■■□ 3.21
NME3-206ENST00000564252 SAFB2Q14151 953 aaKnown RBP eCLIP35.11■■■■□ 3.21
NME3-206ENST00000564252 ATRNO75882 1429 aa35.11■■■■□ 3.21
NME3-206ENST00000564252 KRT28Q7Z3Y7 464 aa35.08■■■■□ 3.21
NME3-206ENST00000564252 PHF8Q9UPP1 1060 aa35.08■■■■□ 3.21
NME3-206ENST00000564252 BCL9LQ86UU0 1499 aa35.07■■■■□ 3.2
NME3-206ENST00000564252 ADGRB2O60241 1585 aa35.07■■■■□ 3.2
NME3-206ENST00000564252 DCAF11Q8TEB1 546 aa35.06■■■■□ 3.2
NME3-206ENST00000564252 POGKQ9P215 609 aa35.06■■■■□ 3.2
NME3-206ENST00000564252 KDM2AQ9Y2K7 1162 aa35.05■■■■□ 3.2
NME3-206ENST00000564252 USP32Q8NFA0 1604 aa35.04■■■■□ 3.2
NME3-206ENST00000564252 TNS3Q68CZ2 1445 aa35.02■■■■□ 3.2
NME3-206ENST00000564252 ANKARQ7Z5J8 1434 aa35.02■■■■□ 3.2
NME3-206ENST00000564252 TRAK1Q9UPV9 953 aa35.02■■■■□ 3.2
NME3-206ENST00000564252 STAC3Q96MF2 364 aa35■■■■□ 3.19
NME3-206ENST00000564252 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.98■■■■□ 3.19
NME3-206ENST00000564252 PSME1Q06323 249 aa34.98■■■■□ 3.19
NME3-206ENST00000564252 SBNO1A3KN83 1393 aa34.97■■■■□ 3.19
NME3-206ENST00000564252 SLIT2O94813 1529 aa34.96■■■■□ 3.19
NME3-206ENST00000564252 HIRIP3Q9BW71 556 aaPredicted RBP34.94■■■■□ 3.18
NME3-206ENST00000564252 ATAD2Q6PL18 1390 aa34.94■■■■□ 3.18
NME3-206ENST00000564252 MINK1Q8N4C8 1332 aaPredicted RBP34.93■■■■□ 3.18
NME3-206ENST00000564252 PMFBP1Q8TBY8 1022 aa34.93■■■■□ 3.18
NME3-206ENST00000564252 GJD4Q96KN9 370 aaPredicted RBP34.91■■■■□ 3.18
NME3-206ENST00000564252 ABCA3Q99758 1704 aa34.91■■■■□ 3.18
NME3-206ENST00000564252 UNC5CLQ8IV45 518 aa34.9■■■■□ 3.18
NME3-206ENST00000564252 CABLES1Q8TDN4 633 aa34.9■■■■□ 3.18
NME3-206ENST00000564252 TULP4Q9NRJ4 1543 aa34.9■■■■□ 3.18
NME3-206ENST00000564252 EP400Q96L91 3159 aa34.9■■■■□ 3.18
NME3-206ENST00000564252 ARHGEF10O15013 1369 aa34.89■■■■□ 3.18
NME3-206ENST00000564252 PRR36Q9H6K5 1346 aa34.89■■■■□ 3.18
NME3-206ENST00000564252 EIF3AQ14152 1382 aaKnown RBP34.88■■■■□ 3.17
NME3-206ENST00000564252 ARHGEF28Q8N1W1 1705 aaKnown RBP34.88■■■■□ 3.17
NME3-206ENST00000564252 TRPM3Q9HCF6 1732 aaPredicted RBP34.87■■■■□ 3.17
NME3-206ENST00000564252 GLI3P10071 1580 aa34.87■■■■□ 3.17
NME3-206ENST00000564252 WASLO00401 505 aaPredicted RBP34.86■■■■□ 3.17
NME3-206ENST00000564252 RALGAPBQ86X10 1494 aa34.85■■■■□ 3.17
NME3-206ENST00000564252 HAP1P54257 671 aaPredicted RBP34.85■■■■□ 3.17
NME3-206ENST00000564252 LMOD2Q6P5Q4 547 aa34.85■■■■□ 3.17
NME3-206ENST00000564252 PLCH1Q4KWH8 1693 aa34.82■■■■□ 3.17
NME3-206ENST00000564252 PLEKHG5O94827 1062 aa34.82■■■■□ 3.16
NME3-206ENST00000564252 ALS2Q96Q42 1657 aa34.81■■■■□ 3.16
NME3-206ENST00000564252 NWD2Q9ULI1 1742 aa34.81■■■■□ 3.16
NME3-206ENST00000564252 GPRASP1Q5JY77 1395 aa34.79■■■■□ 3.16
NME3-206ENST00000564252 KIAA1210Q9ULL0 1709 aa34.78■■■■□ 3.16
NME3-206ENST00000564252 ATP7BP35670 1465 aa34.76■■■■□ 3.15
NME3-206ENST00000564252 VPS72Q15906 364 aa34.74■■■■□ 3.15
NME3-206ENST00000564252 ITSN1Q15811 1721 aa34.74■■■■□ 3.15
NME3-206ENST00000564252 FAM83GA6ND36 823 aa34.72■■■■□ 3.15
NME3-206ENST00000564252 NGDNQ8NEJ9 315 aaKnown RBP34.72■■■■□ 3.15
NME3-206ENST00000564252 CRYBG1Q9Y4K1 1723 aa34.69■■■■□ 3.14
NME3-206ENST00000564252 BRWD3Q6RI45 1802 aa34.69■■■■□ 3.14
NME3-206ENST00000564252 NUDT16Q96DE0 195 aaKnown RBP34.69■■■■□ 3.14
NME3-206ENST00000564252 NRAPQ86VF7 1730 aa34.68■■■■□ 3.14
NME3-206ENST00000564252 CCDC125Q86Z20 511 aa34.66■■■■□ 3.14
NME3-206ENST00000564252 COL14A1Q05707 1796 aaKnown RBP34.65■■■■□ 3.14
NME3-206ENST00000564252 NBPF1Q3BBV0 1214 aa34.65■■■■□ 3.14
NME3-206ENST00000564252 CDK19Q9BWU1 502 aa34.65■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms