RNA–Protein interactions for RNA: ENST00000564014.1

SNHG9-202, Transcript of small nucleolar RNA host gene 9, humanhuman

BASIC

Gene SNHG9, Length 471 nt, Biotype lincRNA, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG9-202ENST00000564014 PRAG1Q86YV5 1406 aa24.72■■□□□ 1.55
SNHG9-202ENST00000564014 ANKRD30BQ9BXX2 1392 aa24.72■■□□□ 1.55
SNHG9-202ENST00000564014 NPHP3Q7Z494 1330 aa24.71■■□□□ 1.55
SNHG9-202ENST00000564014 PPLO60437 1756 aa24.7■■□□□ 1.55
SNHG9-202ENST00000564014 NUTM2FA1L443 756 aa24.7■■□□□ 1.54
SNHG9-202ENST00000564014 USP21Q9UK80 565 aa24.7■■□□□ 1.54
SNHG9-202ENST00000564014 WAPLQ7Z5K2 1190 aa24.69■■□□□ 1.54
SNHG9-202ENST00000564014 FOXO3O43524 673 aa24.68■■□□□ 1.54
SNHG9-202ENST00000564014 TMEM132EQ6IEE7 984 aa24.68■■□□□ 1.54
SNHG9-202ENST00000564014 ACIN1Q9UKV3 1341 aaKnown RBP24.67■■□□□ 1.54
SNHG9-202ENST00000564014 LRPPRCP42704 1394 aaKnown RBP24.67■■□□□ 1.54
SNHG9-202ENST00000564014 XPCQ01831 940 aaPredicted RBP24.65■■□□□ 1.54
SNHG9-202ENST00000564014 TRPC5Q9UL62 973 aaPredicted RBP24.65■■□□□ 1.54
SNHG9-202ENST00000564014 SPATA31E1Q6ZUB1 1445 aa24.64■■□□□ 1.54
SNHG9-202ENST00000564014 RGS12O14924 1447 aa24.63■■□□□ 1.53
SNHG9-202ENST00000564014 CDC42BPGQ6DT37 1551 aa24.63■■□□□ 1.53
SNHG9-202ENST00000564014 LAMC1P11047 1609 aa24.62■■□□□ 1.53
SNHG9-202ENST00000564014 ABCC11Q96J66 1382 aa24.62■■□□□ 1.53
SNHG9-202ENST00000564014 FNBP4Q8N3X1 1017 aaPredicted RBP24.61■■□□□ 1.53
SNHG9-202ENST00000564014 TECPR2O15040 1411 aa24.61■■□□□ 1.53
SNHG9-202ENST00000564014 PLEKHH1Q9ULM0 1364 aa24.58■■□□□ 1.53
SNHG9-202ENST00000564014 PIK3C2GO75747 1445 aa24.58■■□□□ 1.53
SNHG9-202ENST00000564014 YTHDC2Q9H6S0 1430 aaKnown RBP24.57■■□□□ 1.52
SNHG9-202ENST00000564014 ATAD2Q6PL18 1390 aa24.55■■□□□ 1.52
SNHG9-202ENST00000564014 C14orf93Q9H972 538 aaKnown RBP24.55■■□□□ 1.52
SNHG9-202ENST00000564014 PXDNQ92626 1479 aa24.55■■□□□ 1.52
SNHG9-202ENST00000564014 DHX57Q6P158 1386 aaKnown RBP24.54■■□□□ 1.52
SNHG9-202ENST00000564014 HAP1P54257 671 aaPredicted RBP24.54■■□□□ 1.52
SNHG9-202ENST00000564014 SIRT1Q96EB6 747 aa24.54■■□□□ 1.52
SNHG9-202ENST00000564014 CFAP70Q5T0N1 1121 aa24.53■■□□□ 1.52
SNHG9-202ENST00000564014 MYOM2P54296 1465 aa24.52■■□□□ 1.52
SNHG9-202ENST00000564014 KRT28Q7Z3Y7 464 aa24.52■■□□□ 1.52
SNHG9-202ENST00000564014 COL22A1Q8NFW1 1626 aaPredicted RBP24.52■■□□□ 1.52
SNHG9-202ENST00000564014 PSME1Q06323 249 aa24.51■■□□□ 1.51
SNHG9-202ENST00000564014 SAFB2Q14151 953 aaKnown RBP eCLIP24.51■■□□□ 1.51
SNHG9-202ENST00000564014 POGKQ9P215 609 aa24.51■■□□□ 1.51
SNHG9-202ENST00000564014 ATRNO75882 1429 aa24.5■■□□□ 1.51
SNHG9-202ENST00000564014 IFT172Q9UG01 1749 aa24.49■■□□□ 1.51
SNHG9-202ENST00000564014 PRAM1Q96QH2 718 aa24.49■■□□□ 1.51
SNHG9-202ENST00000564014 PHF8Q9UPP1 1060 aa24.49■■□□□ 1.51
SNHG9-202ENST00000564014 SPATA31A3Q5VYP0 1347 aa24.49■■□□□ 1.51
SNHG9-202ENST00000564014 PLEKHG5O94827 1062 aa24.48■■□□□ 1.51
SNHG9-202ENST00000564014 LMOD2Q6P5Q4 547 aa24.48■■□□□ 1.51
SNHG9-202ENST00000564014 GJD4Q96KN9 370 aaPredicted RBP24.48■■□□□ 1.51
SNHG9-202ENST00000564014 KNDC1Q76NI1 1749 aa24.47■■□□□ 1.51
SNHG9-202ENST00000564014 BCL9LQ86UU0 1499 aa24.45■■□□□ 1.51
SNHG9-202ENST00000564014 RAB3GAP2Q9H2M9 1393 aa24.45■■□□□ 1.5
SNHG9-202ENST00000564014 UNC5CLQ8IV45 518 aa24.44■■□□□ 1.5
SNHG9-202ENST00000564014 FMN2Q9NZ56 1722 aa24.43■■□□□ 1.5
SNHG9-202ENST00000564014 KIF1AQ12756 1690 aa24.43■■□□□ 1.5
SNHG9-202ENST00000564014 KDM2AQ9Y2K7 1162 aa24.42■■□□□ 1.5
SNHG9-202ENST00000564014 NRXN1Q9ULB1 1477 aa24.41■■□□□ 1.5
SNHG9-202ENST00000564014 CCDC125Q86Z20 511 aa24.4■■□□□ 1.5
SNHG9-202ENST00000564014 PMFBP1Q8TBY8 1022 aa24.4■■□□□ 1.5
SNHG9-202ENST00000564014 CABLES1Q8TDN4 633 aa24.4■■□□□ 1.5
SNHG9-202ENST00000564014 TRAK1Q9UPV9 953 aa24.4■■□□□ 1.5
SNHG9-202ENST00000564014 TNS3Q68CZ2 1445 aa24.39■■□□□ 1.5
SNHG9-202ENST00000564014 DCAF11Q8TEB1 546 aa24.39■■□□□ 1.49
SNHG9-202ENST00000564014 CCDC9Q9Y3X0 531 aaKnown RBP24.39■■□□□ 1.49
SNHG9-202ENST00000564014 ZRANB1Q9UGI0 708 aa24.37■■□□□ 1.49
SNHG9-202ENST00000564014 HIRIP3Q9BW71 556 aaPredicted RBP24.36■■□□□ 1.49
SNHG9-202ENST00000564014 ARHGEF10O15013 1369 aa24.36■■□□□ 1.49
SNHG9-202ENST00000564014 SBNO1A3KN83 1393 aa24.35■■□□□ 1.49
SNHG9-202ENST00000564014 MARF1Q9Y4F3 1742 aaKnown RBP24.35■■□□□ 1.49
SNHG9-202ENST00000564014 SLIT2O94813 1529 aa24.34■■□□□ 1.49
SNHG9-202ENST00000564014 MINK1Q8N4C8 1332 aaPredicted RBP24.34■■□□□ 1.49
SNHG9-202ENST00000564014 RALGAPBQ86X10 1494 aa24.33■■□□□ 1.49
SNHG9-202ENST00000564014 ANKARQ7Z5J8 1434 aa24.33■■□□□ 1.49
SNHG9-202ENST00000564014 EIF3AQ14152 1382 aaKnown RBP24.32■■□□□ 1.48
SNHG9-202ENST00000564014 GPRASP1Q5JY77 1395 aa24.32■■□□□ 1.48
SNHG9-202ENST00000564014 DLC1Q96QB1 1528 aa24.32■■□□□ 1.48
SNHG9-202ENST00000564014 VPS72Q15906 364 aa24.31■■□□□ 1.48
SNHG9-202ENST00000564014 STAC3Q96MF2 364 aa24.31■■□□□ 1.48
SNHG9-202ENST00000564014 USP32Q8NFA0 1604 aa24.31■■□□□ 1.48
SNHG9-202ENST00000564014 A0A0G2JS52 829 aa24.3■■□□□ 1.48
SNHG9-202ENST00000564014 MYT1Q01538 1121 aa24.3■■□□□ 1.48
SNHG9-202ENST00000564014 SF3B2Q13435 895 aaKnown RBP24.3■■□□□ 1.48
SNHG9-202ENST00000564014 SEPT12Q8IYM1 358 aa24.29■■□□□ 1.48
SNHG9-202ENST00000564014 NGDNQ8NEJ9 315 aaKnown RBP24.28■■□□□ 1.48
SNHG9-202ENST00000564014 WASLO00401 505 aaPredicted RBP24.27■■□□□ 1.48
SNHG9-202ENST00000564014 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.27■■□□□ 1.48
SNHG9-202ENST00000564014 RGPD8O14715 1765 aaPredicted RBP24.26■■□□□ 1.47
SNHG9-202ENST00000564014 FAM83GA6ND36 823 aa24.26■■□□□ 1.47
SNHG9-202ENST00000564014 PAK3O75914 559 aaPredicted RBP24.26■■□□□ 1.47
SNHG9-202ENST00000564014 ADGRB1O14514 1584 aa24.25■■□□□ 1.47
SNHG9-202ENST00000564014 GLI3P10071 1580 aa24.25■■□□□ 1.47
SNHG9-202ENST00000564014 BLMP54132 1417 aaPredicted RBP24.24■■□□□ 1.47
SNHG9-202ENST00000564014 HRCP23327 699 aa24.23■■□□□ 1.47
SNHG9-202ENST00000564014 ADGRB2O60241 1585 aa24.22■■□□□ 1.47
SNHG9-202ENST00000564014 KRT27Q7Z3Y8 459 aa24.22■■□□□ 1.47
SNHG9-202ENST00000564014 BTG4Q9NY30 223 aa24.22■■□□□ 1.47
SNHG9-202ENST00000564014 PRR36Q9H6K5 1346 aa24.21■■□□□ 1.47
SNHG9-202ENST00000564014 ONECUT3O60422 494 aaPredicted RBP24.19■■□□□ 1.46
SNHG9-202ENST00000564014 TULP4Q9NRJ4 1543 aa24.19■■□□□ 1.46
SNHG9-202ENST00000564014 FAM98CQ17RN3 349 aaKnown RBP24.18■■□□□ 1.46
SNHG9-202ENST00000564014 EP400Q96L91 3159 aa24.17■■□□□ 1.46
SNHG9-202ENST00000564014 DEFB132Q7Z7B7 95 aa24.17■■□□□ 1.46
SNHG9-202ENST00000564014 PLCH1Q4KWH8 1693 aa24.16■■□□□ 1.46
SNHG9-202ENST00000564014 NUDT16Q96DE0 195 aaKnown RBP24.16■■□□□ 1.46
SNHG9-202ENST00000564014 PRDM11Q9NQV5 511 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms