RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 NPHP3Q7Z494 1330 aa31.13■■■□□ 2.57
HERC2-204ENST00000563945 ADGRF5Q8IZF2 1346 aa31.13■■■□□ 2.57
HERC2-204ENST00000563945 MPHOSPH9Q99550 1183 aa31.12■■■□□ 2.57
HERC2-204ENST00000563945 USP21Q9UK80 565 aa31.12■■■□□ 2.57
HERC2-204ENST00000563945 ANKRD30BQ9BXX2 1392 aa31.1■■■□□ 2.57
HERC2-204ENST00000563945 TRPC5Q9UL62 973 aaPredicted RBP31.09■■■□□ 2.57
HERC2-204ENST00000563945 LAMC1P11047 1609 aa31.09■■■□□ 2.57
HERC2-204ENST00000563945 WAPLQ7Z5K2 1190 aa31.08■■■□□ 2.57
HERC2-204ENST00000563945 FOXO3O43524 673 aa31.07■■■□□ 2.56
HERC2-204ENST00000563945 LRPPRCP42704 1394 aaKnown RBP31.06■■■□□ 2.56
HERC2-204ENST00000563945 NUTM2FA1L443 756 aa31.06■■■□□ 2.56
HERC2-204ENST00000563945 RGS12O14924 1447 aa31.06■■■□□ 2.56
HERC2-204ENST00000563945 TMEM132EQ6IEE7 984 aa31.05■■■□□ 2.56
HERC2-204ENST00000563945 ACIN1Q9UKV3 1341 aaKnown RBP31.03■■■□□ 2.56
HERC2-204ENST00000563945 FNBP4Q8N3X1 1017 aaPredicted RBP31.03■■■□□ 2.56
HERC2-204ENST00000563945 CDC42BPGQ6DT37 1551 aa31.03■■■□□ 2.56
HERC2-204ENST00000563945 XPCQ01831 940 aaPredicted RBP31.02■■■□□ 2.56
HERC2-204ENST00000563945 ABCC11Q96J66 1382 aa31.01■■■□□ 2.55
HERC2-204ENST00000563945 SPATA31E1Q6ZUB1 1445 aa31■■■□□ 2.55
HERC2-204ENST00000563945 TECPR2O15040 1411 aa30.98■■■□□ 2.55
HERC2-204ENST00000563945 ATAD2Q6PL18 1390 aa30.97■■■□□ 2.55
HERC2-204ENST00000563945 COL22A1Q8NFW1 1626 aaPredicted RBP30.94■■■□□ 2.54
HERC2-204ENST00000563945 PXDNQ92626 1479 aa30.93■■■□□ 2.54
HERC2-204ENST00000563945 PLEKHH1Q9ULM0 1364 aa30.92■■■□□ 2.54
HERC2-204ENST00000563945 YTHDC2Q9H6S0 1430 aaKnown RBP30.92■■■□□ 2.54
HERC2-204ENST00000563945 MYOM2P54296 1465 aa30.92■■■□□ 2.54
HERC2-204ENST00000563945 PIK3C2GO75747 1445 aa30.91■■■□□ 2.54
HERC2-204ENST00000563945 SIRT1Q96EB6 747 aa30.91■■■□□ 2.54
HERC2-204ENST00000563945 ATRNO75882 1429 aa30.9■■■□□ 2.54
HERC2-204ENST00000563945 C14orf93Q9H972 538 aaKnown RBP30.9■■■□□ 2.54
HERC2-204ENST00000563945 DHX57Q6P158 1386 aaKnown RBP30.9■■■□□ 2.54
HERC2-204ENST00000563945 HAP1P54257 671 aaPredicted RBP30.89■■■□□ 2.54
HERC2-204ENST00000563945 KRT28Q7Z3Y7 464 aa30.89■■■□□ 2.54
HERC2-204ENST00000563945 IFT172Q9UG01 1749 aa30.89■■■□□ 2.54
HERC2-204ENST00000563945 PSME1Q06323 249 aa30.87■■■□□ 2.53
HERC2-204ENST00000563945 SPATA31A3Q5VYP0 1347 aa30.86■■■□□ 2.53
HERC2-204ENST00000563945 KNDC1Q76NI1 1749 aa30.86■■■□□ 2.53
HERC2-204ENST00000563945 CFAP70Q5T0N1 1121 aa30.85■■■□□ 2.53
HERC2-204ENST00000563945 GJD4Q96KN9 370 aaPredicted RBP30.85■■■□□ 2.53
HERC2-204ENST00000563945 PHF8Q9UPP1 1060 aa30.84■■■□□ 2.53
HERC2-204ENST00000563945 POGKQ9P215 609 aa30.83■■■□□ 2.53
HERC2-204ENST00000563945 BCL9LQ86UU0 1499 aa30.82■■■□□ 2.53
HERC2-204ENST00000563945 SAFB2Q14151 953 aaKnown RBP eCLIP30.82■■■□□ 2.52
HERC2-204ENST00000563945 UNC5CLQ8IV45 518 aa30.81■■■□□ 2.52
HERC2-204ENST00000563945 FMN2Q9NZ56 1722 aa30.81■■■□□ 2.52
HERC2-204ENST00000563945 KIF1AQ12756 1690 aa30.81■■■□□ 2.52
HERC2-204ENST00000563945 LMOD2Q6P5Q4 547 aa30.8■■■□□ 2.52
HERC2-204ENST00000563945 CCDC125Q86Z20 511 aa30.8■■■□□ 2.52
HERC2-204ENST00000563945 PRAM1Q96QH2 718 aa30.8■■■□□ 2.52
HERC2-204ENST00000563945 PLEKHG5O94827 1062 aa30.79■■■□□ 2.52
HERC2-204ENST00000563945 MARF1Q9Y4F3 1742 aaKnown RBP30.78■■■□□ 2.52
HERC2-204ENST00000563945 ZRANB1Q9UGI0 708 aa30.75■■■□□ 2.51
HERC2-204ENST00000563945 NRXN1Q9ULB1 1477 aa30.72■■■□□ 2.51
HERC2-204ENST00000563945 TNS3Q68CZ2 1445 aa30.72■■■□□ 2.51
HERC2-204ENST00000563945 CABLES1Q8TDN4 633 aa30.71■■■□□ 2.51
HERC2-204ENST00000563945 CCDC9Q9Y3X0 531 aaKnown RBP30.71■■■□□ 2.51
HERC2-204ENST00000563945 RAB3GAP2Q9H2M9 1393 aa30.7■■■□□ 2.51
HERC2-204ENST00000563945 PMFBP1Q8TBY8 1022 aa30.7■■■□□ 2.51
HERC2-204ENST00000563945 SLIT2O94813 1529 aa30.69■■■□□ 2.5
HERC2-204ENST00000563945 KDM2AQ9Y2K7 1162 aa30.69■■■□□ 2.5
HERC2-204ENST00000563945 SBNO1A3KN83 1393 aa30.68■■■□□ 2.5
HERC2-204ENST00000563945 ARHGEF10O15013 1369 aa30.68■■■□□ 2.5
HERC2-204ENST00000563945 TRAK1Q9UPV9 953 aa30.68■■■□□ 2.5
HERC2-204ENST00000563945 RALGAPBQ86X10 1494 aa30.67■■■□□ 2.5
HERC2-204ENST00000563945 RGPD8O14715 1765 aaPredicted RBP30.66■■■□□ 2.5
HERC2-204ENST00000563945 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.66■■■□□ 2.5
HERC2-204ENST00000563945 DCAF11Q8TEB1 546 aa30.65■■■□□ 2.5
HERC2-204ENST00000563945 USP32Q8NFA0 1604 aa30.65■■■□□ 2.5
HERC2-204ENST00000563945 VPS72Q15906 364 aa30.64■■■□□ 2.5
HERC2-204ENST00000563945 SF3B2Q13435 895 aaKnown RBP30.63■■■□□ 2.49
HERC2-204ENST00000563945 HIRIP3Q9BW71 556 aaPredicted RBP30.63■■■□□ 2.49
HERC2-204ENST00000563945 ANKARQ7Z5J8 1434 aa30.63■■■□□ 2.49
HERC2-204ENST00000563945 DLC1Q96QB1 1528 aa30.63■■■□□ 2.49
HERC2-204ENST00000563945 SEPT12Q8IYM1 358 aa30.62■■■□□ 2.49
HERC2-204ENST00000563945 MINK1Q8N4C8 1332 aaPredicted RBP30.62■■■□□ 2.49
HERC2-204ENST00000563945 GPRASP1Q5JY77 1395 aa30.62■■■□□ 2.49
HERC2-204ENST00000563945 STAC3Q96MF2 364 aa30.61■■■□□ 2.49
HERC2-204ENST00000563945 EIF3AQ14152 1382 aaKnown RBP30.61■■■□□ 2.49
HERC2-204ENST00000563945 GLI3P10071 1580 aa30.58■■■□□ 2.49
HERC2-204ENST00000563945 A0A0G2JS52 829 aa30.58■■■□□ 2.49
HERC2-204ENST00000563945 MYT1Q01538 1121 aa30.58■■■□□ 2.49
HERC2-204ENST00000563945 BLMP54132 1417 aaPredicted RBP30.56■■■□□ 2.48
HERC2-204ENST00000563945 FAM83GA6ND36 823 aa30.56■■■□□ 2.48
HERC2-204ENST00000563945 NGDNQ8NEJ9 315 aaKnown RBP30.56■■■□□ 2.48
HERC2-204ENST00000563945 WASLO00401 505 aaPredicted RBP30.55■■■□□ 2.48
HERC2-204ENST00000563945 PAK3O75914 559 aaPredicted RBP30.53■■■□□ 2.48
HERC2-204ENST00000563945 KRT27Q7Z3Y8 459 aa30.53■■■□□ 2.48
HERC2-204ENST00000563945 ONECUT3O60422 494 aaPredicted RBP30.52■■■□□ 2.48
HERC2-204ENST00000563945 ADGRB1O14514 1584 aa30.52■■■□□ 2.48
HERC2-204ENST00000563945 NWD2Q9ULI1 1742 aa30.51■■■□□ 2.47
HERC2-204ENST00000563945 ADGRB2O60241 1585 aa30.51■■■□□ 2.47
HERC2-204ENST00000563945 BTG4Q9NY30 223 aa30.5■■■□□ 2.47
HERC2-204ENST00000563945 PLCH1Q4KWH8 1693 aa30.49■■■□□ 2.47
HERC2-204ENST00000563945 DEFB132Q7Z7B7 95 aa30.48■■■□□ 2.47
HERC2-204ENST00000563945 PRR36Q9H6K5 1346 aa30.47■■■□□ 2.47
HERC2-204ENST00000563945 EP400Q96L91 3159 aa30.47■■■□□ 2.47
HERC2-204ENST00000563945 HRCP23327 699 aa30.47■■■□□ 2.47
HERC2-204ENST00000563945 BRWD3Q6RI45 1802 aa30.46■■■□□ 2.47
HERC2-204ENST00000563945 TULP4Q9NRJ4 1543 aa30.46■■■□□ 2.47
HERC2-204ENST00000563945 FAM98CQ17RN3 349 aaKnown RBP30.45■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms