RNA–Protein interactions for RNA: ENST00000563662.2

VAC14-204, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 3

Gene VAC14, Length 554 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-204ENST00000563662 MST1RQ04912 1400 aa14.66□□□□□ -0.06
VAC14-204ENST00000563662 DCAF11Q8TEB1 546 aa14.65□□□□□ -0.06
VAC14-204ENST00000563662 CFAP70Q5T0N1 1121 aa14.64□□□□□ -0.07
VAC14-204ENST00000563662 SAMD1Q6SPF0 538 aaPredicted RBP14.64□□□□□ -0.07
VAC14-204ENST00000563662 PIK3C2GO75747 1445 aa14.64□□□□□ -0.07
VAC14-204ENST00000563662 XRN1Q8IZH2 1706 aaKnown RBP14.63□□□□□ -0.07
VAC14-204ENST00000563662 ESCO1Q5FWF5 840 aa14.63□□□□□ -0.07
VAC14-204ENST00000563662 ZNF772Q68DY9 489 aaPredicted RBP14.63□□□□□ -0.07
VAC14-204ENST00000563662 WAPLQ7Z5K2 1190 aa14.63□□□□□ -0.07
VAC14-204ENST00000563662 KDM2AQ9Y2K7 1162 aa14.63□□□□□ -0.07
VAC14-204ENST00000563662 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.63□□□□□ -0.07
VAC14-204ENST00000563662 TECPR2O15040 1411 aa14.62□□□□□ -0.07
VAC14-204ENST00000563662 ORAI2Q96SN7 254 aa14.62□□□□□ -0.07
VAC14-204ENST00000563662 POGKQ9P215 609 aa14.62□□□□□ -0.07
VAC14-204ENST00000563662 RGS17Q9UGC6 210 aaPredicted RBP14.62□□□□□ -0.07
VAC14-204ENST00000563662 C1orf167Q5SNV9 1468 aa14.62□□□□□ -0.07
VAC14-204ENST00000563662 YTHDC2Q9H6S0 1430 aaKnown RBP14.61□□□□□ -0.07
VAC14-204ENST00000563662 MYOM2P54296 1465 aa14.6□□□□□ -0.07
VAC14-204ENST00000563662 NPHP3Q7Z494 1330 aa14.6□□□□□ -0.07
VAC14-204ENST00000563662 AHDC1Q5TGY3 1603 aaPredicted RBP14.59□□□□□ -0.07
VAC14-204ENST00000563662 NUTM2BA6NNL0 878 aaPredicted RBP14.59□□□□□ -0.07
VAC14-204ENST00000563662 NUTM2EB1AL46 878 aaPredicted RBP14.59□□□□□ -0.07
VAC14-204ENST00000563662 NUTM2AQ8IVF1 878 aaPredicted RBP14.59□□□□□ -0.07
VAC14-204ENST00000563662 ASXL1Q8IXJ9 1541 aa14.59□□□□□ -0.07
VAC14-204ENST00000563662 SOS2Q07890 1332 aaPredicted RBP14.59□□□□□ -0.07
VAC14-204ENST00000563662 NRXN1Q9ULB1 1477 aa14.58□□□□□ -0.08
VAC14-204ENST00000563662 ATXN8OSP0DMR3 200 aa14.58□□□□□ -0.08
VAC14-204ENST00000563662 PRAM1Q96QH2 718 aa14.57□□□□□ -0.08
VAC14-204ENST00000563662 PHLPP1O60346 1717 aa14.57□□□□□ -0.08
VAC14-204ENST00000563662 PPLO60437 1756 aa14.57□□□□□ -0.08
VAC14-204ENST00000563662 POTEAQ6S8J7 498 aa14.56□□□□□ -0.08
VAC14-204ENST00000563662 DDX17Q92841 729 aaKnown RBP14.56□□□□□ -0.08
VAC14-204ENST00000563662 ATF5Q9Y2D1 282 aaPredicted RBP14.56□□□□□ -0.08
VAC14-204ENST00000563662 FOXO3O43524 673 aa14.55□□□□□ -0.08
VAC14-204ENST00000563662 PSME1Q06323 249 aa14.55□□□□□ -0.08
VAC14-204ENST00000563662 C1QBPQ07021 282 aaKnown RBP14.55□□□□□ -0.08
VAC14-204ENST00000563662 NUTM2FA1L443 756 aa14.54□□□□□ -0.08
VAC14-204ENST00000563662 TRAK1Q9UPV9 953 aa14.54□□□□□ -0.08
VAC14-204ENST00000563662 COL16A1Q07092 1604 aaPredicted RBP14.54□□□□□ -0.08
VAC14-204ENST00000563662 PLEKHH1Q9ULM0 1364 aa14.53□□□□□ -0.08
VAC14-204ENST00000563662 PNPLA6Q8IY17 1366 aa14.52□□□□□ -0.08
VAC14-204ENST00000563662 RXRBP28702 533 aa14.52□□□□□ -0.09
VAC14-204ENST00000563662 SAFB2Q14151 953 aaKnown RBP eCLIP14.52□□□□□ -0.09
VAC14-204ENST00000563662 NGLY1Q96IV0 654 aa14.52□□□□□ -0.09
VAC14-204ENST00000563662 PHF8Q9UPP1 1060 aa14.52□□□□□ -0.09
VAC14-204ENST00000563662 EIF3AQ14152 1382 aaKnown RBP14.51□□□□□ -0.09
VAC14-204ENST00000563662 C8orf37Q96NL8 207 aa14.51□□□□□ -0.09
VAC14-204ENST00000563662 KRT28Q7Z3Y7 464 aa14.5□□□□□ -0.09
VAC14-204ENST00000563662 CDC42BPGQ6DT37 1551 aa14.5□□□□□ -0.09
VAC14-204ENST00000563662 SETD1AO15047 1707 aaKnown RBP14.49□□□□□ -0.09
VAC14-204ENST00000563662 ADAMTS2O95450 1211 aa14.49□□□□□ -0.09
VAC14-204ENST00000563662 AFF2P51816 1311 aa14.48□□□□□ -0.09
VAC14-204ENST00000563662 WASLO00401 505 aaPredicted RBP14.48□□□□□ -0.09
VAC14-204ENST00000563662 QTRT2Q9H974 415 aaKnown RBP14.48□□□□□ -0.09
VAC14-204ENST00000563662 DLC1Q96QB1 1528 aa14.47□□□□□ -0.09
VAC14-204ENST00000563662 LRP6O75581 1613 aa14.47□□□□□ -0.09
VAC14-204ENST00000563662 LAMC1P11047 1609 aa14.47□□□□□ -0.09
VAC14-204ENST00000563662 NALCNQ8IZF0 1738 aa14.46□□□□□ -0.09
VAC14-204ENST00000563662 MINK1Q8N4C8 1332 aaPredicted RBP14.46□□□□□ -0.09
VAC14-204ENST00000563662 RBM6P78332 1123 aaKnown RBP14.46□□□□□ -0.09
VAC14-204ENST00000563662 XPCQ01831 940 aaPredicted RBP14.46□□□□□ -0.09
VAC14-204ENST00000563662 SPINK5Q9NQ38 1064 aaPredicted RBP14.46□□□□□ -0.09
VAC14-204ENST00000563662 ANKARQ7Z5J8 1434 aa14.46□□□□□ -0.09
VAC14-204ENST00000563662 IFT172Q9UG01 1749 aa14.46□□□□□ -0.1
VAC14-204ENST00000563662 SPATA31A3Q5VYP0 1347 aa14.45□□□□□ -0.1
VAC14-204ENST00000563662 TRIM26Q12899 539 aaPredicted RBP14.45□□□□□ -0.1
VAC14-204ENST00000563662 FNBP4Q8N3X1 1017 aaPredicted RBP14.45□□□□□ -0.1
VAC14-204ENST00000563662 HIRIP3Q9BW71 556 aaPredicted RBP14.45□□□□□ -0.1
VAC14-204ENST00000563662 USP21Q9UK80 565 aa14.45□□□□□ -0.1
VAC14-204ENST00000563662 SHPRHQ149N8 1683 aa14.45□□□□□ -0.1
VAC14-204ENST00000563662 HAP1P54257 671 aaPredicted RBP14.44□□□□□ -0.1
VAC14-204ENST00000563662 TRPC5Q9UL62 973 aaPredicted RBP14.44□□□□□ -0.1
VAC14-204ENST00000563662 GPRASP1Q5JY77 1395 aa14.44□□□□□ -0.1
VAC14-204ENST00000563662 NHSL1Q5SYE7 1610 aa14.44□□□□□ -0.1
VAC14-204ENST00000563662 NEUROD1Q13562 356 aa14.43□□□□□ -0.1
VAC14-204ENST00000563662 NGDNQ8NEJ9 315 aaKnown RBP14.43□□□□□ -0.1
VAC14-204ENST00000563662 PMFBP1Q8TBY8 1022 aa14.43□□□□□ -0.1
VAC14-204ENST00000563662 L3MBTL2Q969R5 705 aa14.43□□□□□ -0.1
VAC14-204ENST00000563662 ADGRB1O14514 1584 aa14.43□□□□□ -0.1
VAC14-204ENST00000563662 LMOD2Q6P5Q4 547 aa14.42□□□□□ -0.1
VAC14-204ENST00000563662 SBNO1A3KN83 1393 aa14.42□□□□□ -0.1
VAC14-204ENST00000563662 KNDC1Q76NI1 1749 aa14.41□□□□□ -0.1
VAC14-204ENST00000563662 NUDT16Q96DE0 195 aaKnown RBP14.41□□□□□ -0.1
VAC14-204ENST00000563662 ARHGEF10O15013 1369 aa14.41□□□□□ -0.1
VAC14-204ENST00000563662 PXDNQ92626 1479 aa14.41□□□□□ -0.1
VAC14-204ENST00000563662 NBPF1Q3BBV0 1214 aa14.4□□□□□ -0.1
VAC14-204ENST00000563662 SIN3AQ96ST3 1273 aa14.4□□□□□ -0.1
VAC14-204ENST00000563662 CDK19Q9BWU1 502 aa14.4□□□□□ -0.1
VAC14-204ENST00000563662 CCDC61Q9Y6R9 512 aa14.4□□□□□ -0.1
VAC14-204ENST00000563662 CAPN15O75808 1086 aa14.39□□□□□ -0.11
VAC14-204ENST00000563662 CENPJQ9HC77 1338 aaPredicted RBP14.38□□□□□ -0.11
VAC14-204ENST00000563662 CDK12Q9NYV4 1490 aaPredicted RBP14.38□□□□□ -0.11
VAC14-204ENST00000563662 UNC5CLQ8IV45 518 aa14.37□□□□□ -0.11
VAC14-204ENST00000563662 TNS3Q68CZ2 1445 aa14.36□□□□□ -0.11
VAC14-204ENST00000563662 PAK3O75914 559 aaPredicted RBP14.36□□□□□ -0.11
VAC14-204ENST00000563662 PLEKHG3A1L390 1219 aa14.35□□□□□ -0.11
VAC14-204ENST00000563662 SRPK2P78362 688 aaKnown RBP14.35□□□□□ -0.11
VAC14-204ENST00000563662 PRR36Q9H6K5 1346 aa14.35□□□□□ -0.11
VAC14-204ENST00000563662 KIF1AQ12756 1690 aa14.34□□□□□ -0.11
VAC14-204ENST00000563662 GJD4Q96KN9 370 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms