RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 C22orf23Q9BZE7 217 aa14.96□□□□□ -0.02
ABCA3-203ENST00000563623 HSCBQ8IWL3 235 aa14.95□□□□□ -0.02
ABCA3-203ENST00000563623 FOXD4L1Q9NU39 408 aa14.95□□□□□ -0.02
ABCA3-203ENST00000563623 FAM43AQ8N2R8 423 aa14.95□□□□□ -0.02
ABCA3-203ENST00000563623 NAP1L5Q96NT1 182 aaPredicted RBP14.95□□□□□ -0.02
ABCA3-203ENST00000563623 RSPH6AQ9H0K4 717 aa14.95□□□□□ -0.02
ABCA3-203ENST00000563623 EXOSC9Q06265 439 aaKnown RBP14.94□□□□□ -0.02
ABCA3-203ENST00000563623 SCAPERQ9BY12 1400 aa14.94□□□□□ -0.02
ABCA3-203ENST00000563623 TBC1D32Q96NH3 1257 aa14.94□□□□□ -0.02
ABCA3-203ENST00000563623 UNC13BO14795 1591 aa14.94□□□□□ -0.02
ABCA3-203ENST00000563623 SRPK2P78362 688 aaKnown RBP14.93□□□□□ -0.02
ABCA3-203ENST00000563623 CABP2Q9NPB3 220 aa14.93□□□□□ -0.02
ABCA3-203ENST00000563623 IQGAP3Q86VI3 1631 aa14.93□□□□□ -0.02
ABCA3-203ENST00000563623 MVPQ14764 893 aaKnown RBP14.93□□□□□ -0.02
ABCA3-203ENST00000563623 PLCH2O75038 1416 aa14.92□□□□□ -0.02
ABCA3-203ENST00000563623 NPC1L1Q9UHC9 1359 aa14.92□□□□□ -0.02
ABCA3-203ENST00000563623 WDR63Q8IWG1 891 aa14.92□□□□□ -0.02
ABCA3-203ENST00000563623 GGNBP2Q9H3C7 697 aa14.92□□□□□ -0.02
ABCA3-203ENST00000563623 NINLQ9Y2I6 1382 aa14.92□□□□□ -0.02
ABCA3-203ENST00000563623 ATP10AO60312 1499 aa14.91□□□□□ -0.02
ABCA3-203ENST00000563623 HSP90AB1P08238 724 aaKnown RBP14.91□□□□□ -0.02
ABCA3-203ENST00000563623 LNPKQ9C0E8 428 aa14.91□□□□□ -0.02
ABCA3-203ENST00000563623 SYNMO15061 1565 aa14.91□□□□□ -0.02
ABCA3-203ENST00000563623 LAMC1P11047 1609 aa14.91□□□□□ -0.02
ABCA3-203ENST00000563623 MCM4P33991 863 aa14.9□□□□□ -0.02
ABCA3-203ENST00000563623 CHMP5Q9NZZ3 219 aa14.9□□□□□ -0.02
ABCA3-203ENST00000563623 POLR3AO14802 1390 aaPredicted RBP14.9□□□□□ -0.02
ABCA3-203ENST00000563623 TRAK2O60296 914 aa14.89□□□□□ -0.03
ABCA3-203ENST00000563623 ABCC2Q92887 1545 aa14.89□□□□□ -0.03
ABCA3-203ENST00000563623 PANK2Q9BZ23 570 aa14.89□□□□□ -0.03
ABCA3-203ENST00000563623 ERVK-7P63135 1459 aa14.88□□□□□ -0.03
ABCA3-203ENST00000563623 NOB1Q9ULX3 412 aaKnown RBP14.88□□□□□ -0.03
ABCA3-203ENST00000563623 SSH1Q8WYL5 1049 aa14.88□□□□□ -0.03
ABCA3-203ENST00000563623 MADDQ8WXG6 1647 aa14.88□□□□□ -0.03
ABCA3-203ENST00000563623 ELL2O00472 640 aaPredicted RBP14.87□□□□□ -0.03
ABCA3-203ENST00000563623 RRAGDQ9NQL2 400 aaPredicted RBP14.87□□□□□ -0.03
ABCA3-203ENST00000563623 UGGT1Q9NYU2 1555 aa14.87□□□□□ -0.03
ABCA3-203ENST00000563623 NOS1P29475 1434 aa14.87□□□□□ -0.03
ABCA3-203ENST00000563623 RIPK4P57078 832 aa14.87□□□□□ -0.03
ABCA3-203ENST00000563623 PNNQ9H307 717 aaKnown RBP14.87□□□□□ -0.03
ABCA3-203ENST00000563623 TRIM27P14373 513 aa14.86□□□□□ -0.03
ABCA3-203ENST00000563623 DDX19BQ9UMR2 479 aa14.86□□□□□ -0.03
ABCA3-203ENST00000563623 XRCC6P12956 609 aaKnown RBP eCLIP14.86□□□□□ -0.03
ABCA3-203ENST00000563623 AAMPQ13685 434 aa14.86□□□□□ -0.03
ABCA3-203ENST00000563623 EVC2Q86UK5 1308 aa14.85□□□□□ -0.03
ABCA3-203ENST00000563623 TMEM57Q8N5G2 664 aa14.85□□□□□ -0.03
ABCA3-203ENST00000563623 ANTXR1Q9H6X2 564 aa14.85□□□□□ -0.03
ABCA3-203ENST00000563623 KDM5AP29375 1690 aaKnown RBP14.85□□□□□ -0.03
ABCA3-203ENST00000563623 PLXNC1O60486 1568 aa14.85□□□□□ -0.03
ABCA3-203ENST00000563623 HSP90AA2PQ14568 343 aaPredicted RBP14.84□□□□□ -0.03
ABCA3-203ENST00000563623 ANKRD45Q5TZF3 282 aa14.84□□□□□ -0.03
ABCA3-203ENST00000563623 ATF7IPQ6VMQ6 1270 aa14.84□□□□□ -0.03
ABCA3-203ENST00000563623 TRIM44Q96DX7 344 aaPredicted RBP14.84□□□□□ -0.03
ABCA3-203ENST00000563623 MINK1Q8N4C8 1332 aaPredicted RBP14.84□□□□□ -0.03
ABCA3-203ENST00000563623 ERCC6L2Q5T890 1561 aa14.84□□□□□ -0.03
ABCA3-203ENST00000563623 C1orf115Q9H7X2 142 aa14.84□□□□□ -0.03
ABCA3-203ENST00000563623 CLTCL1P53675 1640 aa14.83□□□□□ -0.03
ABCA3-203ENST00000563623 IPO8O15397 1037 aaKnown RBP14.83□□□□□ -0.04
ABCA3-203ENST00000563623 TMPOP42166 694 aaKnown RBP14.83□□□□□ -0.04
ABCA3-203ENST00000563623 CFAP65Q6ZU64 1925 aaKnown RBP14.83□□□□□ -0.04
ABCA3-203ENST00000563623 CLASP1Q7Z460 1538 aa14.83□□□□□ -0.04
ABCA3-203ENST00000563623 RNF17Q9BXT8 1623 aaKnown RBP14.82□□□□□ -0.04
ABCA3-203ENST00000563623 TRPM2O94759 1503 aa14.82□□□□□ -0.04
ABCA3-203ENST00000563623 IQGAP1P46940 1657 aa14.82□□□□□ -0.04
ABCA3-203ENST00000563623 NCLP19338 710 aaKnown RBP14.81□□□□□ -0.04
ABCA3-203ENST00000563623 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.81□□□□□ -0.04
ABCA3-203ENST00000563623 PTPRTO14522 1441 aa14.81□□□□□ -0.04
ABCA3-203ENST00000563623 C14orf93Q9H972 538 aaKnown RBP14.79□□□□□ -0.04
ABCA3-203ENST00000563623 DDX11L8A8MPP1 907 aa14.79□□□□□ -0.04
ABCA3-203ENST00000563623 APBB1O00213 710 aa14.79□□□□□ -0.04
ABCA3-203ENST00000563623 NPM1P06748 294 aaKnown RBP eCLIP14.79□□□□□ -0.04
ABCA3-203ENST00000563623 FBLN1P23142 703 aa14.79□□□□□ -0.04
ABCA3-203ENST00000563623 THUMPD2Q9BTF0 503 aaKnown RBP14.78□□□□□ -0.04
ABCA3-203ENST00000563623 STAG3Q9UJ98 1225 aa14.78□□□□□ -0.04
ABCA3-203ENST00000563623 DIAPH1O60610 1272 aaKnown RBP14.78□□□□□ -0.04
ABCA3-203ENST00000563623 HMOX1P09601 288 aa14.78□□□□□ -0.04
ABCA3-203ENST00000563623 GBP4Q96PP9 640 aa14.78□□□□□ -0.04
ABCA3-203ENST00000563623 CCDC27Q2M243 656 aa14.78□□□□□ -0.04
ABCA3-203ENST00000563623 ABCC1P33527 1531 aa14.77□□□□□ -0.04
ABCA3-203ENST00000563623 FANCAO15360 1455 aa14.77□□□□□ -0.05
ABCA3-203ENST00000563623 MRE11P49959 708 aa14.77□□□□□ -0.05
ABCA3-203ENST00000563623 VGFO15240 615 aaPredicted RBP14.76□□□□□ -0.05
ABCA3-203ENST00000563623 GRPEL1Q9HAV7 217 aa14.76□□□□□ -0.05
ABCA3-203ENST00000563623 TERF2IPQ9NYB0 399 aa14.76□□□□□ -0.05
ABCA3-203ENST00000563623 CHD1LQ86WJ1 897 aa14.75□□□□□ -0.05
ABCA3-203ENST00000563623 ADGRL1O94910 1474 aa14.75□□□□□ -0.05
ABCA3-203ENST00000563623 SPHKAPQ2M3C7 1700 aa14.75□□□□□ -0.05
ABCA3-203ENST00000563623 KIF16BQ96L93 1317 aa14.75□□□□□ -0.05
ABCA3-203ENST00000563623 PDE4CQ08493 712 aa14.75□□□□□ -0.05
ABCA3-203ENST00000563623 HDAC1Q13547 482 aaPredicted RBP14.75□□□□□ -0.05
ABCA3-203ENST00000563623 ANP32BQ92688 251 aaKnown RBP14.75□□□□□ -0.05
ABCA3-203ENST00000563623 MYOM1P52179 1685 aa14.75□□□□□ -0.05
ABCA3-203ENST00000563623 GOLGA6L22H0YM25 854 aa14.74□□□□□ -0.05
ABCA3-203ENST00000563623 PRKAR2BP31323 418 aa14.74□□□□□ -0.05
ABCA3-203ENST00000563623 HDGFL2Q7Z4V5 671 aaPredicted RBP14.74□□□□□ -0.05
ABCA3-203ENST00000563623 TNPO1Q92973 898 aaKnown RBP14.74□□□□□ -0.05
ABCA3-203ENST00000563623 TRIM35Q9UPQ4 493 aa14.74□□□□□ -0.05
ABCA3-203ENST00000563623 RTEL1-TNFRSF6BF6WH68 1400 aa14.74□□□□□ -0.05
ABCA3-203ENST00000563623 RBM42Q9BTD8 480 aaKnown RBP14.74□□□□□ -0.05
ABCA3-203ENST00000563623 PHF23Q9BUL5 403 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms