RNA–Protein interactions for RNA: ENST00000563522.5

PDXDC1-208, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-208ENST00000563522 CDK12Q9NYV4 1490 aaPredicted RBP12.47□□□□□ -0.41
PDXDC1-208ENST00000563522 MST1RQ04912 1400 aa12.47□□□□□ -0.41
PDXDC1-208ENST00000563522 ZNF326Q5BKZ1 582 aaKnown RBP12.47□□□□□ -0.41
PDXDC1-208ENST00000563522 NRXN3Q9Y4C0 1643 aa12.47□□□□□ -0.41
PDXDC1-208ENST00000563522 ADGRL3Q9HAR2 1447 aa12.46□□□□□ -0.41
PDXDC1-208ENST00000563522 METP08581 1390 aa12.46□□□□□ -0.41
PDXDC1-208ENST00000563522 RXRBP28702 533 aa12.46□□□□□ -0.41
PDXDC1-208ENST00000563522 ITGAEP38570 1179 aa12.46□□□□□ -0.41
PDXDC1-208ENST00000563522 LRRC59Q96AG4 307 aaKnown RBP12.46□□□□□ -0.41
PDXDC1-208ENST00000563522 UPF1Q92900 1129 aaKnown RBP eCLIP12.45□□□□□ -0.42
PDXDC1-208ENST00000563522 SETD1AO15047 1707 aaKnown RBP12.45□□□□□ -0.42
PDXDC1-208ENST00000563522 SPHKAPQ2M3C7 1700 aa12.45□□□□□ -0.42
PDXDC1-208ENST00000563522 NUTM2BA6NNL0 878 aaPredicted RBP12.44□□□□□ -0.42
PDXDC1-208ENST00000563522 NUTM2EB1AL46 878 aaPredicted RBP12.44□□□□□ -0.42
PDXDC1-208ENST00000563522 NUTM2AQ8IVF1 878 aaPredicted RBP12.44□□□□□ -0.42
PDXDC1-208ENST00000563522 AFF2P51816 1311 aa12.43□□□□□ -0.42
PDXDC1-208ENST00000563522 TRIM52Q96A61 297 aa12.43□□□□□ -0.42
PDXDC1-208ENST00000563522 NEXMIFQ5QGS0 1516 aa12.42□□□□□ -0.42
PDXDC1-208ENST00000563522 NHSL1Q5SYE7 1610 aa12.42□□□□□ -0.42
PDXDC1-208ENST00000563522 PTCH1Q13635 1447 aa12.42□□□□□ -0.42
PDXDC1-208ENST00000563522 PNPLA6Q8IY17 1366 aa12.42□□□□□ -0.42
PDXDC1-208ENST00000563522 VGFO15240 615 aaPredicted RBP12.41□□□□□ -0.42
PDXDC1-208ENST00000563522 PRAG1Q86YV5 1406 aa12.41□□□□□ -0.42
PDXDC1-208ENST00000563522 CLTCL1P53675 1640 aa12.4□□□□□ -0.42
PDXDC1-208ENST00000563522 RPGRIP1LQ68CZ1 1315 aa12.4□□□□□ -0.42
PDXDC1-208ENST00000563522 PIP4P2Q8N4L2 257 aa12.4□□□□□ -0.42
PDXDC1-208ENST00000563522 C1orf167Q5SNV9 1468 aa12.4□□□□□ -0.43
PDXDC1-208ENST00000563522 NAIPQ13075 1403 aa12.39□□□□□ -0.43
PDXDC1-208ENST00000563522 RRBP1Q9P2E9 1410 aaKnown RBP12.39□□□□□ -0.43
PDXDC1-208ENST00000563522 FXR2P51116 673 aaKnown RBP eCLIP12.38□□□□□ -0.432e-12■■□□□ 13.8
PDXDC1-208ENST00000563522 RBM6P78332 1123 aaKnown RBP12.38□□□□□ -0.43
PDXDC1-208ENST00000563522 QTRT2Q9H974 415 aaKnown RBP12.38□□□□□ -0.43
PDXDC1-208ENST00000563522 LAMC1P11047 1609 aa12.37□□□□□ -0.43
PDXDC1-208ENST00000563522 NALCNQ8IZF0 1738 aa12.37□□□□□ -0.43
PDXDC1-208ENST00000563522 PRR29P0C7W0 189 aa12.37□□□□□ -0.43
PDXDC1-208ENST00000563522 C8orf37Q96NL8 207 aa12.37□□□□□ -0.43
PDXDC1-208ENST00000563522 ROBO2Q9HCK4 1378 aa12.37□□□□□ -0.43
PDXDC1-208ENST00000563522 HFM1A2PYH4 1435 aa12.37□□□□□ -0.43
PDXDC1-208ENST00000563522 SOS2Q07890 1332 aaPredicted RBP12.37□□□□□ -0.43
PDXDC1-208ENST00000563522 DDX17Q92841 729 aaKnown RBP12.36□□□□□ -0.43
PDXDC1-208ENST00000563522 PPARGC1BQ86YN6 1023 aaKnown RBP12.35□□□□□ -0.43
PDXDC1-208ENST00000563522 NGLY1Q96IV0 654 aa12.35□□□□□ -0.43
PDXDC1-208ENST00000563522 RGS12O14924 1447 aa12.35□□□□□ -0.43
PDXDC1-208ENST00000563522 KIF1BO60333 1816 aa12.34□□□□□ -0.43
PDXDC1-208ENST00000563522 ORAI2Q96SN7 254 aa12.33□□□□□ -0.44
PDXDC1-208ENST00000563522 ADAMTS2O95450 1211 aa12.32□□□□□ -0.44
PDXDC1-208ENST00000563522 FNBP4Q8N3X1 1017 aaPredicted RBP12.32□□□□□ -0.44
PDXDC1-208ENST00000563522 NPHP3Q7Z494 1330 aa12.32□□□□□ -0.44
PDXDC1-208ENST00000563522 TRPC5Q9UL62 973 aaPredicted RBP12.31□□□□□ -0.44
PDXDC1-208ENST00000563522 ATAD2Q6PL18 1390 aa12.3□□□□□ -0.44
PDXDC1-208ENST00000563522 USP21Q9UK80 565 aa12.3□□□□□ -0.44
PDXDC1-208ENST00000563522 CDC42BPGQ6DT37 1551 aa12.3□□□□□ -0.44
PDXDC1-208ENST00000563522 COL22A1Q8NFW1 1626 aaPredicted RBP12.29□□□□□ -0.44
PDXDC1-208ENST00000563522 TECPR2O15040 1411 aa12.28□□□□□ -0.44
PDXDC1-208ENST00000563522 ATRNO75882 1429 aa12.28□□□□□ -0.44
PDXDC1-208ENST00000563522 MYOM2P54296 1465 aa12.28□□□□□ -0.44
PDXDC1-208ENST00000563522 PRKAR2AP13861 404 aaKnown RBP12.28□□□□□ -0.44
PDXDC1-208ENST00000563522 ESCO1Q5FWF5 840 aa12.28□□□□□ -0.44
PDXDC1-208ENST00000563522 LRPPRCP42704 1394 aaKnown RBP12.28□□□□□ -0.44
PDXDC1-208ENST00000563522 ANKRD30BQ9BXX2 1392 aa12.28□□□□□ -0.44
PDXDC1-208ENST00000563522 PPLO60437 1756 aa12.27□□□□□ -0.45
PDXDC1-208ENST00000563522 ABCC11Q96J66 1382 aa12.27□□□□□ -0.45
PDXDC1-208ENST00000563522 CCDC144AA2RUR9 1427 aa12.27□□□□□ -0.45
PDXDC1-208ENST00000563522 PXDNQ92626 1479 aa12.27□□□□□ -0.45
PDXDC1-208ENST00000563522 CCDC125Q86Z20 511 aa12.25□□□□□ -0.45
PDXDC1-208ENST00000563522 ADGRF5Q8IZF2 1346 aa12.25□□□□□ -0.45
PDXDC1-208ENST00000563522 SPATA31E1Q6ZUB1 1445 aa12.25□□□□□ -0.45
PDXDC1-208ENST00000563522 FOXO3O43524 673 aa12.24□□□□□ -0.45
PDXDC1-208ENST00000563522 BCL9LQ86UU0 1499 aa12.24□□□□□ -0.45
PDXDC1-208ENST00000563522 ACIN1Q9UKV3 1341 aaKnown RBP12.23□□□□□ -0.45
PDXDC1-208ENST00000563522 FKBP8Q14318 412 aa12.23□□□□□ -0.45
PDXDC1-208ENST00000563522 SIRT1Q96EB6 747 aa12.23□□□□□ -0.45
PDXDC1-208ENST00000563522 PIK3C2GO75747 1445 aa12.22□□□□□ -0.45
PDXDC1-208ENST00000563522 WAPLQ7Z5K2 1190 aa12.22□□□□□ -0.45
PDXDC1-208ENST00000563522 STK26Q9P289 416 aa12.22□□□□□ -0.45
PDXDC1-208ENST00000563522 SPATA31A3Q5VYP0 1347 aa12.21□□□□□ -0.45
PDXDC1-208ENST00000563522 RGL3Q3MIN7 710 aa12.21□□□□□ -0.45
PDXDC1-208ENST00000563522 GJD4Q96KN9 370 aaPredicted RBP12.21□□□□□ -0.45
PDXDC1-208ENST00000563522 MPHOSPH9Q99550 1183 aa12.21□□□□□ -0.45
PDXDC1-208ENST00000563522 ZRANB1Q9UGI0 708 aa12.21□□□□□ -0.45
PDXDC1-208ENST00000563522 YTHDC2Q9H6S0 1430 aaKnown RBP12.2□□□□□ -0.46
PDXDC1-208ENST00000563522 XPCQ01831 940 aaPredicted RBP12.2□□□□□ -0.46
PDXDC1-208ENST00000563522 TMEM132EQ6IEE7 984 aa12.19□□□□□ -0.46
PDXDC1-208ENST00000563522 UNC5CLQ8IV45 518 aa12.19□□□□□ -0.46
PDXDC1-208ENST00000563522 SLIT2O94813 1529 aa12.19□□□□□ -0.46
PDXDC1-208ENST00000563522 KNDC1Q76NI1 1749 aa12.19□□□□□ -0.46
PDXDC1-208ENST00000563522 KIF1AQ12756 1690 aa12.19□□□□□ -0.46
PDXDC1-208ENST00000563522 PLEKHH1Q9ULM0 1364 aa12.18□□□□□ -0.46
PDXDC1-208ENST00000563522 PROM2Q8N271 834 aa12.18□□□□□ -0.46
PDXDC1-208ENST00000563522 C14orf93Q9H972 538 aaKnown RBP12.18□□□□□ -0.46
PDXDC1-208ENST00000563522 FMN2Q9NZ56 1722 aa12.17□□□□□ -0.46
PDXDC1-208ENST00000563522 IFT172Q9UG01 1749 aa12.17□□□□□ -0.46
PDXDC1-208ENST00000563522 NRXN1Q9ULB1 1477 aa12.17□□□□□ -0.46
PDXDC1-208ENST00000563522 NUTM2FA1L443 756 aa12.17□□□□□ -0.46
PDXDC1-208ENST00000563522 HAX1O00165 279 aa12.17□□□□□ -0.46
PDXDC1-208ENST00000563522 PSME1Q06323 249 aa12.17□□□□□ -0.46
PDXDC1-208ENST00000563522 CHADLQ6NUI6 762 aa12.17□□□□□ -0.46
PDXDC1-208ENST00000563522 KRT28Q7Z3Y7 464 aa12.17□□□□□ -0.46
PDXDC1-208ENST00000563522 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.17□□□□□ -0.46
PDXDC1-208ENST00000563522 MARF1Q9Y4F3 1742 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms