RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 SPRYD7Q5W111 196 aa8.39□□□□□ -1.07
HMGB1P33-201ENST00000563485 SYMPKQ92797 1274 aaKnown RBP8.39□□□□□ -1.07
HMGB1P33-201ENST00000563485 USB1Q9BQ65 265 aaKnown RBP8.39□□□□□ -1.07
HMGB1P33-201ENST00000563485 FDX1P10109 184 aa8.37□□□□□ -1.07
HMGB1P33-201ENST00000563485 NDUFV2P19404 249 aa8.37□□□□□ -1.07
HMGB1P33-201ENST00000563485 PCDHGC3Q9UN70 934 aa8.37□□□□□ -1.07
HMGB1P33-201ENST00000563485 MOXD2PA6NHM9 499 aa8.36□□□□□ -1.07
HMGB1P33-201ENST00000563485 MMP16P51512 607 aa8.36□□□□□ -1.07
HMGB1P33-201ENST00000563485 LAPTM4AQ15012 233 aa8.36□□□□□ -1.07
HMGB1P33-201ENST00000563485 ZNF697Q5TEC3 545 aa8.36□□□□□ -1.07
HMGB1P33-201ENST00000563485 Q6ZNB5 142 aa8.36□□□□□ -1.07
HMGB1P33-201ENST00000563485 TRIM67Q6ZTA4 783 aa8.36□□□□□ -1.07
HMGB1P33-201ENST00000563485 ZNF598Q86UK7 904 aaKnown RBP8.36□□□□□ -1.07
HMGB1P33-201ENST00000563485 PDZRN3Q9UPQ7 1066 aa8.36□□□□□ -1.07
HMGB1P33-201ENST00000563485 NRG2O14511 850 aaPredicted RBP8.35□□□□□ -1.07
HMGB1P33-201ENST00000563485 DXOO77932 396 aaKnown RBP8.35□□□□□ -1.07
HMGB1P33-201ENST00000563485 TBC1D2Q9BYX2 928 aa8.35□□□□□ -1.07
HMGB1P33-201ENST00000563485 RETREG3Q86VR2 466 aa8.33□□□□□ -1.08
HMGB1P33-201ENST00000563485 C6orf229H3BNL8 230 aa8.32□□□□□ -1.08
HMGB1P33-201ENST00000563485 JUNDP17535 347 aa8.32□□□□□ -1.08
HMGB1P33-201ENST00000563485 RPIAP49247 311 aa8.32□□□□□ -1.08
HMGB1P33-201ENST00000563485 TNFRSF10AO00220 468 aa8.31□□□□□ -1.08
HMGB1P33-201ENST00000563485 LCE2BO14633 110 aa8.3□□□□□ -1.08
HMGB1P33-201ENST00000563485 GDF9O60383 454 aa8.3□□□□□ -1.08
HMGB1P33-201ENST00000563485 RSBN1LQ6PCB5 846 aaPredicted RBP8.3□□□□□ -1.08
HMGB1P33-201ENST00000563485 CCDC24Q8N4L8 307 aa8.3□□□□□ -1.08
HMGB1P33-201ENST00000563485 ZBTB24O43167 697 aaPredicted RBP8.29□□□□□ -1.08
HMGB1P33-201ENST00000563485 PRR20EP86478 221 aa8.29□□□□□ -1.08
HMGB1P33-201ENST00000563485 PRR20CP86479 221 aa8.29□□□□□ -1.08
HMGB1P33-201ENST00000563485 PRR20DP86480 221 aa8.29□□□□□ -1.08
HMGB1P33-201ENST00000563485 PRR20BP86481 221 aa8.29□□□□□ -1.08
HMGB1P33-201ENST00000563485 PRR20AP86496 221 aa8.29□□□□□ -1.08
HMGB1P33-201ENST00000563485 DIXDC1Q155Q3 683 aa8.29□□□□□ -1.08
HMGB1P33-201ENST00000563485 PKD2L1Q9P0L9 805 aa8.29□□□□□ -1.08
HMGB1P33-201ENST00000563485 SPTLC1O15269 473 aa8.28□□□□□ -1.08
HMGB1P33-201ENST00000563485 CD2BP2O95400 341 aaKnown RBP8.28□□□□□ -1.08
HMGB1P33-201ENST00000563485 FOXC1Q12948 553 aa8.28□□□□□ -1.08
HMGB1P33-201ENST00000563485 MTMR2Q13614 643 aa8.28□□□□□ -1.08
HMGB1P33-201ENST00000563485 PCDHB15Q9Y5E8 787 aa8.28□□□□□ -1.08
HMGB1P33-201ENST00000563485 GJA5P36382 358 aa8.27□□□□□ -1.09
HMGB1P33-201ENST00000563485 RIC3Q7Z5B4 369 aa8.27□□□□□ -1.09
HMGB1P33-201ENST00000563485 PRR7Q8TB68 274 aa8.27□□□□□ -1.09
HMGB1P33-201ENST00000563485 TRIM32Q13049 653 aa8.26□□□□□ -1.09
HMGB1P33-201ENST00000563485 CSPP1Q1MSJ5 1256 aa8.26□□□□□ -1.09
HMGB1P33-201ENST00000563485 MYSM1Q5VVJ2 828 aa8.26□□□□□ -1.09
HMGB1P33-201ENST00000563485 TRAF7Q6Q0C0 670 aa8.26□□□□□ -1.09
HMGB1P33-201ENST00000563485 NUDT12Q9BQG2 462 aa8.26□□□□□ -1.09
HMGB1P33-201ENST00000563485 GPBP1L1Q9HC44 474 aaPredicted RBP8.26□□□□□ -1.09
HMGB1P33-201ENST00000563485 CABLES1Q8TDN4 633 aa8.25□□□□□ -1.09
HMGB1P33-201ENST00000563485 LIMD1Q9UGP4 676 aa8.25□□□□□ -1.09
HMGB1P33-201ENST00000563485 HRCP23327 699 aa8.24□□□□□ -1.09
HMGB1P33-201ENST00000563485 FAM187AA6NFU0 413 aa8.23□□□□□ -1.09
HMGB1P33-201ENST00000563485 SPDYE5A6NIY4 337 aa8.23□□□□□ -1.09
HMGB1P33-201ENST00000563485 CFAP99D6REC4 459 aa8.23□□□□□ -1.09
HMGB1P33-201ENST00000563485 PTCRAQ6ISU1 281 aaPredicted RBP8.23□□□□□ -1.09
HMGB1P33-201ENST00000563485 KDM4CQ9H3R0 1056 aa8.23□□□□□ -1.09
HMGB1P33-201ENST00000563485 ZBTB3Q9H5J0 574 aa8.23□□□□□ -1.09
HMGB1P33-201ENST00000563485 CCNYL3P0C7X3 344 aa8.22□□□□□ -1.09
HMGB1P33-201ENST00000563485 PTPRNQ16849 979 aa8.22□□□□□ -1.09
HMGB1P33-201ENST00000563485 PKDCCQ504Y2 493 aa8.22□□□□□ -1.09
HMGB1P33-201ENST00000563485 SKOR1P84550 965 aa8.21□□□□□ -1.1
HMGB1P33-201ENST00000563485 QPCTQ16769 361 aa8.21□□□□□ -1.1
HMGB1P33-201ENST00000563485 PRPF38BQ5VTL8 546 aaKnown RBP8.21□□□□□ -1.1
HMGB1P33-201ENST00000563485 DESI1Q6ICB0 168 aa8.21□□□□□ -1.1
HMGB1P33-201ENST00000563485 WNT7AO00755 349 aa8.2□□□□□ -1.1
HMGB1P33-201ENST00000563485 DGAT1O75907 488 aa8.2□□□□□ -1.1
HMGB1P33-201ENST00000563485 CLK2P49760 499 aaKnown RBP8.2□□□□□ -1.1
HMGB1P33-201ENST00000563485 FAM117AQ9C073 453 aa8.2□□□□□ -1.1
HMGB1P33-201ENST00000563485 TOR4AQ9NXH8 423 aa8.2□□□□□ -1.1
HMGB1P33-201ENST00000563485 MYT1Q01538 1121 aa8.19□□□□□ -1.1
HMGB1P33-201ENST00000563485 CYP4X1Q8N118 509 aa8.19□□□□□ -1.1
HMGB1P33-201ENST00000563485 POLR3EQ9NVU0 708 aa8.19□□□□□ -1.1
HMGB1P33-201ENST00000563485 LILRB3O75022 631 aa8.18□□□□□ -1.1
HMGB1P33-201ENST00000563485 TUSC1Q2TAM9 212 aa8.18□□□□□ -1.1
HMGB1P33-201ENST00000563485 MRGPRX2Q96LB1 330 aa8.18□□□□□ -1.1
HMGB1P33-201ENST00000563485 RSPH6AQ9H0K4 717 aa8.18□□□□□ -1.1
HMGB1P33-201ENST00000563485 UNC93B1Q9H1C4 597 aa8.18□□□□□ -1.1
HMGB1P33-201ENST00000563485 EVA1BQ9NVM1 165 aa8.18□□□□□ -1.1
HMGB1P33-201ENST00000563485 NUTM2BA6NNL0 878 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P33-201ENST00000563485 NUTM2EB1AL46 878 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P33-201ENST00000563485 WNT7BP56706 349 aa8.17□□□□□ -1.1
HMGB1P33-201ENST00000563485 KCNH2Q12809 1159 aa8.17□□□□□ -1.1
HMGB1P33-201ENST00000563485 RC3H1Q5TC82 1133 aaKnown RBP8.17□□□□□ -1.1
HMGB1P33-201ENST00000563485 NUTM2DQ5VT03 806 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P33-201ENST00000563485 LYPD8Q6UX82 237 aa8.17□□□□□ -1.1
HMGB1P33-201ENST00000563485 NUTM2AQ8IVF1 878 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P33-201ENST00000563485 PLEKHG3A1L390 1219 aa8.16□□□□□ -1.1
HMGB1P33-201ENST00000563485 RTL5Q5HYW3 569 aaPredicted RBP8.16□□□□□ -1.1
HMGB1P33-201ENST00000563485 TSC1Q92574 1164 aa8.16□□□□□ -1.1
HMGB1P33-201ENST00000563485 DDRGK1Q96HY6 314 aa8.16□□□□□ -1.1
HMGB1P33-201ENST00000563485 TTC24A2A3L6 582 aaPredicted RBP8.15□□□□□ -1.1
HMGB1P33-201ENST00000563485 PER1O15534 1290 aaPredicted RBP8.15□□□□□ -1.1
HMGB1P33-201ENST00000563485 CTHP32929 405 aa8.15□□□□□ -1.1
HMGB1P33-201ENST00000563485 LINC01559Q495D7 138 aa8.15□□□□□ -1.1
HMGB1P33-201ENST00000563485 SNIP1Q8TAD8 396 aaKnown RBP8.15□□□□□ -1.1
HMGB1P33-201ENST00000563485 ST8SIA5O15466 376 aa8.14□□□□□ -1.11
HMGB1P33-201ENST00000563485 F12P00748 615 aaPredicted RBP8.14□□□□□ -1.11
HMGB1P33-201ENST00000563485 SH3BP2P78314 561 aa8.14□□□□□ -1.11
HMGB1P33-201ENST00000563485 SH3D19Q5HYK7 790 aa8.14□□□□□ -1.11
HMGB1P33-201ENST00000563485 MAP10Q9P2G4 905 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms